RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 APBB1O00213 710 aa10.35□□□□□ -0.75
RTFDC1-209ENST00000487211 Q3C1V9 767 aa10.35□□□□□ -0.75
RTFDC1-209ENST00000487211 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
RTFDC1-209ENST00000487211 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
RTFDC1-209ENST00000487211 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
RTFDC1-209ENST00000487211 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
RTFDC1-209ENST00000487211 PRM3Q9NNZ6 103 aa10.33□□□□□ -0.76
RTFDC1-209ENST00000487211 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
RTFDC1-209ENST00000487211 GAPVD1Q14C86 1478 aa10.32□□□□□ -0.76
RTFDC1-209ENST00000487211 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
RTFDC1-209ENST00000487211 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-209ENST00000487211 KDM6BO15054 1643 aa10.32□□□□□ -0.76
RTFDC1-209ENST00000487211 EIF4G3O43432 1585 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-209ENST00000487211 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
RTFDC1-209ENST00000487211 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
RTFDC1-209ENST00000487211 C1orf115Q9H7X2 142 aa10.31□□□□□ -0.76
RTFDC1-209ENST00000487211 NR1I2O75469 434 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 ABL2P42684 1182 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 ARID3AQ99856 593 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 HMX1Q9NP08 348 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
RTFDC1-209ENST00000487211 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
RTFDC1-209ENST00000487211 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
RTFDC1-209ENST00000487211 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-209ENST00000487211 ARXQ96QS3 562 aa10.29□□□□□ -0.76
RTFDC1-209ENST00000487211 TBC1D2BQ9UPU7 963 aa10.29□□□□□ -0.76
RTFDC1-209ENST00000487211 IGF1RP08069 1367 aa10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 FMNL1O95466 1100 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 USB1Q9BQ65 265 aaKnown RBP10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 WDR97A6NE52 1622 aa10.28□□□□□ -0.76
RTFDC1-209ENST00000487211 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
RTFDC1-209ENST00000487211 ZNF330Q9Y3S2 320 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-209ENST00000487211 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
RTFDC1-209ENST00000487211 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
RTFDC1-209ENST00000487211 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
RTFDC1-209ENST00000487211 POTEMA6NI47 508 aa10.26□□□□□ -0.77
RTFDC1-209ENST00000487211 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
RTFDC1-209ENST00000487211 RUSC2Q8N2Y8 1516 aa10.26□□□□□ -0.77
RTFDC1-209ENST00000487211 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
RTFDC1-209ENST00000487211 KIF27Q86VH2 1401 aa10.25□□□□□ -0.77
RTFDC1-209ENST00000487211 PER1O15534 1290 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-209ENST00000487211 COPS2P61201 443 aa10.25□□□□□ -0.77
RTFDC1-209ENST00000487211 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
RTFDC1-209ENST00000487211 THAP11Q96EK4 314 aa10.24□□□□□ -0.77
RTFDC1-209ENST00000487211 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
RTFDC1-209ENST00000487211 PTPN5P54829 565 aa10.23□□□□□ -0.77
RTFDC1-209ENST00000487211 EPS8L1Q8TE68 723 aa10.23□□□□□ -0.77
RTFDC1-209ENST00000487211 NR6A1Q15406 480 aa10.22□□□□□ -0.77
RTFDC1-209ENST00000487211 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
RTFDC1-209ENST00000487211 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
RTFDC1-209ENST00000487211 HOMEZQ8IX15 550 aa10.22□□□□□ -0.77
RTFDC1-209ENST00000487211 CCDC82Q8N4S0 544 aa10.21□□□□□ -0.77
RTFDC1-209ENST00000487211 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
RTFDC1-209ENST00000487211 ERICH3Q5RHP9 1530 aa10.21□□□□□ -0.78
RTFDC1-209ENST00000487211 JUNDP17535 347 aa10.2□□□□□ -0.78
RTFDC1-209ENST00000487211 SPSB2Q99619 263 aa10.2□□□□□ -0.78
RTFDC1-209ENST00000487211 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
RTFDC1-209ENST00000487211 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
RTFDC1-209ENST00000487211 IRF5Q13568 498 aa10.19□□□□□ -0.78
RTFDC1-209ENST00000487211 FAM9AQ8IZU1 332 aaPredicted RBP10.18□□□□□ -0.78
RTFDC1-209ENST00000487211 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 GPR37L1O60883 481 aa10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 MSS51Q4VC12 460 aa10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 MTRQ99707 1265 aa10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 PLSCR2Q9NRY7 297 aa10.17□□□□□ -0.78
RTFDC1-209ENST00000487211 TLL1O43897 1013 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 ZPR1O75312 459 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 PTPRNQ16849 979 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 CCDC97Q96F63 343 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 GRIN2AQ12879 1464 aa10.16□□□□□ -0.78
RTFDC1-209ENST00000487211 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
RTFDC1-209ENST00000487211 PNMA1Q8ND90 353 aa10.15□□□□□ -0.78
RTFDC1-209ENST00000487211 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
RTFDC1-209ENST00000487211 ADH1BP00325 375 aa10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 CTHP32929 405 aa10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 VAC14Q08AM6 782 aa10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 CALR3Q96L12 384 aaKnown RBP10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
RTFDC1-209ENST00000487211 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 DXOO77932 396 aaKnown RBP10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 F12P00748 615 aaPredicted RBP10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 GLMNQ92990 594 aa10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 MAP10Q9P2G4 905 aa10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 NUP160Q12769 1436 aa10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 DIP2BQ9P265 1576 aa10.13□□□□□ -0.79
RTFDC1-209ENST00000487211 ABCC10Q5T3U5 1492 aa10.12□□□□□ -0.79
RTFDC1-209ENST00000487211 TJAP1Q5JTD0 557 aa10.12□□□□□ -0.79
RTFDC1-209ENST00000487211 ZNF516Q92618 1163 aa10.12□□□□□ -0.79
RTFDC1-209ENST00000487211 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
RTFDC1-209ENST00000487211 CCNYL3P0C7X3 344 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms