RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 WASHC2AQ641Q2 1341 aa7.52□□□□□ -1.2
COL17A1-206ENST00000483876 NOS1P29475 1434 aa7.52□□□□□ -1.2
COL17A1-206ENST00000483876 PTPRUQ92729 1446 aa7.52□□□□□ -1.2
COL17A1-206ENST00000483876 ATP10DQ9P241 1426 aa7.52□□□□□ -1.2
COL17A1-206ENST00000483876 RIMS2Q9UQ26 1411 aa7.52□□□□□ -1.2
COL17A1-206ENST00000483876 CCER2I3L3R5 266 aa7.52□□□□□ -1.21
COL17A1-206ENST00000483876 FAM196AQ6ZSG2 479 aa7.52□□□□□ -1.21
COL17A1-206ENST00000483876 PELP1Q8IZL8 1130 aaKnown RBP7.52□□□□□ -1.21
COL17A1-206ENST00000483876 SLC52A1Q9NWF4 448 aa7.52□□□□□ -1.21
COL17A1-206ENST00000483876 NUP188Q5SRE5 1749 aa7.52□□□□□ -1.21
COL17A1-206ENST00000483876 RREB1Q92766 1687 aa7.51□□□□□ -1.21
COL17A1-206ENST00000483876 USP47Q96K76 1375 aa7.51□□□□□ -1.21
COL17A1-206ENST00000483876 CCDC7Q96M83 1385 aa7.51□□□□□ -1.21
COL17A1-206ENST00000483876 JMYQ8N9B5 988 aa7.51□□□□□ -1.21
COL17A1-206ENST00000483876 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.51□□□□□ -1.21
COL17A1-206ENST00000483876 PDGFDQ9GZP0 370 aaPredicted RBP7.51□□□□□ -1.21
COL17A1-206ENST00000483876 NPHP3Q7Z494 1330 aa7.51□□□□□ -1.21
COL17A1-206ENST00000483876 ROCK2O75116 1388 aaKnown RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 C11orf95C9JLR9 678 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 MSH5O43196 834 aa7.5□□□□□ -1.21
COL17A1-206ENST00000483876 ANP32CO43423 234 aa7.5□□□□□ -1.21
COL17A1-206ENST00000483876 CENPBP07199 599 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 FAM161AQ3B820 660 aa7.5□□□□□ -1.21
COL17A1-206ENST00000483876 ZNF326Q5BKZ1 582 aaKnown RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 ZNF526Q8TF50 670 aaPredicted RBP7.5□□□□□ -1.21
COL17A1-206ENST00000483876 TMEM131LA2VDJ0 1609 aa7.49□□□□□ -1.21
COL17A1-206ENST00000483876 XPCQ01831 940 aaPredicted RBP7.49□□□□□ -1.21
COL17A1-206ENST00000483876 KLRG1Q96E93 195 aa7.49□□□□□ -1.21
COL17A1-206ENST00000483876 KIF7Q2M1P5 1343 aa7.49□□□□□ -1.21
COL17A1-206ENST00000483876 ST20-MTHFSA0A0A6YYL1 179 aa7.48□□□□□ -1.21
COL17A1-206ENST00000483876 TNS2Q63HR2 1409 aa7.48□□□□□ -1.21
COL17A1-206ENST00000483876 ARXQ96QS3 562 aa7.48□□□□□ -1.21
COL17A1-206ENST00000483876 MAP3K5Q99683 1374 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 VGFO15240 615 aaPredicted RBP7.47□□□□□ -1.21
COL17A1-206ENST00000483876 FOXO3O43524 673 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 NBPF1Q3BBV0 1214 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 ANO8Q9HCE9 1232 aaPredicted RBP7.47□□□□□ -1.21
COL17A1-206ENST00000483876 CLTCL1P53675 1640 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 TRPM1Q7Z4N2 1603 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 NRXN1Q9ULB1 1477 aa7.47□□□□□ -1.21
COL17A1-206ENST00000483876 CASZ1Q86V15 1759 aa7.46□□□□□ -1.21
COL17A1-206ENST00000483876 USP32Q8NFA0 1604 aa7.46□□□□□ -1.21
COL17A1-206ENST00000483876 ESCO1Q5FWF5 840 aa7.46□□□□□ -1.22
COL17A1-206ENST00000483876 SGIP1Q9BQI5 828 aa7.46□□□□□ -1.22
COL17A1-206ENST00000483876 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
COL17A1-206ENST00000483876 PXDNQ92626 1479 aa7.46□□□□□ -1.22
COL17A1-206ENST00000483876 KIAA1210Q9ULL0 1709 aa7.45□□□□□ -1.22
COL17A1-206ENST00000483876 GRIN3BO60391 1043 aa7.45□□□□□ -1.22
COL17A1-206ENST00000483876 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
COL17A1-206ENST00000483876 TESK2Q96S53 571 aa7.45□□□□□ -1.22
COL17A1-206ENST00000483876 C14orf93Q9H972 538 aaKnown RBP7.45□□□□□ -1.22
COL17A1-206ENST00000483876 KIF1BO60333 1816 aa7.45□□□□□ -1.22
COL17A1-206ENST00000483876 KIF3CO14782 793 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 PLEKHG5O94827 1062 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 CHGAP10645 457 aaKnown RBP7.44□□□□□ -1.22
COL17A1-206ENST00000483876 TMF1P82094 1093 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 KLHL34Q8N239 644 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 CABLES1Q8TDN4 633 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
COL17A1-206ENST00000483876 LRPPRCP42704 1394 aaKnown RBP7.44□□□□□ -1.22
COL17A1-206ENST00000483876 KTN1Q86UP2 1357 aaKnown RBP7.44□□□□□ -1.22
COL17A1-206ENST00000483876 XRN1Q8IZH2 1706 aaKnown RBP7.44□□□□□ -1.22
COL17A1-206ENST00000483876 NWD2Q9ULI1 1742 aa7.44□□□□□ -1.22
COL17A1-206ENST00000483876 HTRA3P83110 453 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 PRKRIP1Q9H875 184 aaPredicted RBP7.43□□□□□ -1.22
COL17A1-206ENST00000483876 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 PLCH1Q4KWH8 1693 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 SPATA31A5Q5VU36 1347 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 SPATA31A3Q5VYP0 1347 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 SPATA31A7Q8IWB4 1347 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 ADGRF5Q8IZF2 1346 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 NALCNQ8IZF0 1738 aa7.43□□□□□ -1.22
COL17A1-206ENST00000483876 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
COL17A1-206ENST00000483876 NEXMIFQ5QGS0 1516 aa7.42□□□□□ -1.22
COL17A1-206ENST00000483876 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
COL17A1-206ENST00000483876 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
COL17A1-206ENST00000483876 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
COL17A1-206ENST00000483876 PUS7Q96PZ0 661 aaKnown RBP7.42□□□□□ -1.22
COL17A1-206ENST00000483876 TOMM70O94826 608 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 YBX3P16989 372 aaKnown RBP eCLIP7.41□□□□□ -1.22
COL17A1-206ENST00000483876 MLLT1Q03111 559 aaPredicted RBP7.41□□□□□ -1.22
COL17A1-206ENST00000483876 CFAP70Q5T0N1 1121 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 STK32BQ9NY57 414 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 ADCY9O60503 1353 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 SBNO2Q9Y2G9 1366 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 PIK3C2GO75747 1445 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
COL17A1-206ENST00000483876 PLSCR1O15162 318 aa7.4□□□□□ -1.22
COL17A1-206ENST00000483876 PER1O15534 1290 aaPredicted RBP7.4□□□□□ -1.22
COL17A1-206ENST00000483876 RALBP1Q15311 655 aa7.4□□□□□ -1.22
COL17A1-206ENST00000483876 METP08581 1390 aa7.4□□□□□ -1.22
COL17A1-206ENST00000483876 IFT172Q9UG01 1749 aa7.4□□□□□ -1.23
COL17A1-206ENST00000483876 SLC15A2Q16348 729 aa7.39□□□□□ -1.23
COL17A1-206ENST00000483876 WDR90Q96KV7 1748 aa7.38□□□□□ -1.23
COL17A1-206ENST00000483876 NLGN2Q8NFZ4 835 aa7.38□□□□□ -1.23
COL17A1-206ENST00000483876 PPLO60437 1756 aa7.38□□□□□ -1.23
COL17A1-206ENST00000483876 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
COL17A1-206ENST00000483876 YTHDC1Q96MU7 727 aaKnown RBP7.37□□□□□ -1.23
COL17A1-206ENST00000483876 GOLGB1Q14789 3259 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms