RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 WNT7AO00755 349 aa11.43□□□□□ -0.58
SNX13-208ENST00000482558 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
SNX13-208ENST00000482558 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
SNX13-208ENST00000482558 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
SNX13-208ENST00000482558 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
SNX13-208ENST00000482558 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
SNX13-208ENST00000482558 ZMYND15Q9H091 742 aa11.41□□□□□ -0.58
SNX13-208ENST00000482558 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
SNX13-208ENST00000482558 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
SNX13-208ENST00000482558 ARHGAP35Q9NRY4 1499 aa11.4□□□□□ -0.58
SNX13-208ENST00000482558 FECHP22830 423 aa11.4□□□□□ -0.58
SNX13-208ENST00000482558 INSM1Q01101 510 aaPredicted RBP11.4□□□□□ -0.58
SNX13-208ENST00000482558 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
SNX13-208ENST00000482558 GPR37O15354 613 aa11.39□□□□□ -0.59
SNX13-208ENST00000482558 SMPD1P17405 629 aa11.39□□□□□ -0.59
SNX13-208ENST00000482558 KRI1Q8N9T8 703 aaKnown RBP11.39□□□□□ -0.59
SNX13-208ENST00000482558 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
SNX13-208ENST00000482558 NESP48681 1621 aa11.38□□□□□ -0.59
SNX13-208ENST00000482558 TRIM32Q13049 653 aa11.37□□□□□ -0.59
SNX13-208ENST00000482558 Q3C1V9 767 aa11.37□□□□□ -0.59
SNX13-208ENST00000482558 SENP2Q9HC62 589 aa11.37□□□□□ -0.59
SNX13-208ENST00000482558 ATP13A2Q9NQ11 1180 aa11.37□□□□□ -0.59
SNX13-208ENST00000482558 WDR97A6NE52 1622 aa11.37□□□□□ -0.59
SNX13-208ENST00000482558 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
SNX13-208ENST00000482558 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
SNX13-208ENST00000482558 MMP16P51512 607 aa11.36□□□□□ -0.59
SNX13-208ENST00000482558 RNF19BQ6ZMZ0 732 aa11.36□□□□□ -0.59
SNX13-208ENST00000482558 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
SNX13-208ENST00000482558 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
SNX13-208ENST00000482558 RAD54L2Q9Y4B4 1467 aa11.34□□□□□ -0.59
SNX13-208ENST00000482558 AK7Q96M32 723 aa11.34□□□□□ -0.59
SNX13-208ENST00000482558 REPIN1Q9BWE0 567 aaKnown RBP11.34□□□□□ -0.59
SNX13-208ENST00000482558 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
SNX13-208ENST00000482558 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
SNX13-208ENST00000482558 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
SNX13-208ENST00000482558 PHOX2BQ99453 314 aa11.33□□□□□ -0.6
SNX13-208ENST00000482558 RRBP1Q9P2E9 1410 aaKnown RBP11.33□□□□□ -0.6
SNX13-208ENST00000482558 TERTO14746 1132 aaKnown RBP11.32□□□□□ -0.6
SNX13-208ENST00000482558 MRGPRX2Q96LB1 330 aa11.32□□□□□ -0.6
SNX13-208ENST00000482558 GAPVD1Q14C86 1478 aa11.32□□□□□ -0.6
SNX13-208ENST00000482558 SNRPBP14678 240 aaKnown RBP11.31□□□□□ -0.6
SNX13-208ENST00000482558 KIFC2Q96AC6 838 aa11.31□□□□□ -0.6
SNX13-208ENST00000482558 CTTNBP2Q8WZ74 1663 aa11.3□□□□□ -0.6
SNX13-208ENST00000482558 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
SNX13-208ENST00000482558 ARID3AQ99856 593 aa11.3□□□□□ -0.6
SNX13-208ENST00000482558 MRC2Q9UBG0 1479 aa11.3□□□□□ -0.6
SNX13-208ENST00000482558 TIAM1Q13009 1591 aa11.29□□□□□ -0.6
SNX13-208ENST00000482558 J3QL48 77 aa11.29□□□□□ -0.6
SNX13-208ENST00000482558 DXOO77932 396 aaKnown RBP11.29□□□□□ -0.6
SNX13-208ENST00000482558 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
SNX13-208ENST00000482558 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
SNX13-208ENST00000482558 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
SNX13-208ENST00000482558 USB1Q9BQ65 265 aaKnown RBP11.28□□□□□ -0.6
SNX13-208ENST00000482558 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
SNX13-208ENST00000482558 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
SNX13-208ENST00000482558 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
SNX13-208ENST00000482558 WNT7BP56706 349 aa11.26□□□□□ -0.61
SNX13-208ENST00000482558 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
SNX13-208ENST00000482558 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
SNX13-208ENST00000482558 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
SNX13-208ENST00000482558 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
SNX13-208ENST00000482558 CD46P15529 392 aa11.25□□□□□ -0.61
SNX13-208ENST00000482558 HPS1Q92902 700 aa11.25□□□□□ -0.61
SNX13-208ENST00000482558 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
SNX13-208ENST00000482558 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
SNX13-208ENST00000482558 TRIM66O15016 1216 aa11.24□□□□□ -0.61
SNX13-208ENST00000482558 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
SNX13-208ENST00000482558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX13-208ENST00000482558 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
SNX13-208ENST00000482558 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
SNX13-208ENST00000482558 USP46P62068 366 aa11.23□□□□□ -0.61
SNX13-208ENST00000482558 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
SNX13-208ENST00000482558 TDRD9Q8NDG6 1382 aaKnown RBP11.23□□□□□ -0.61
SNX13-208ENST00000482558 KDM4AO75164 1064 aa11.22□□□□□ -0.61
SNX13-208ENST00000482558 SAMD9Q5K651 1589 aa11.22□□□□□ -0.61
SNX13-208ENST00000482558 WDR62O43379 1518 aa11.21□□□□□ -0.61
SNX13-208ENST00000482558 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
SNX13-208ENST00000482558 IRF6O14896 467 aa11.21□□□□□ -0.61
SNX13-208ENST00000482558 PDE4DQ08499 809 aa11.21□□□□□ -0.61
SNX13-208ENST00000482558 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
SNX13-208ENST00000482558 SKOR1P84550 965 aa11.19□□□□□ -0.62
SNX13-208ENST00000482558 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
SNX13-208ENST00000482558 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
SNX13-208ENST00000482558 PBRM1Q86U86 1689 aa11.18□□□□□ -0.62
SNX13-208ENST00000482558 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
SNX13-208ENST00000482558 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
SNX13-208ENST00000482558 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
SNX13-208ENST00000482558 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
SNX13-208ENST00000482558 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
SNX13-208ENST00000482558 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
SNX13-208ENST00000482558 CCDC18Q5T9S5 1454 aa11.16□□□□□ -0.62
SNX13-208ENST00000482558 AMHR2Q16671 573 aa11.15□□□□□ -0.62
SNX13-208ENST00000482558 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
SNX13-208ENST00000482558 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
SNX13-208ENST00000482558 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
SNX13-208ENST00000482558 HOXA2O43364 376 aa11.14□□□□□ -0.63
SNX13-208ENST00000482558 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
SNX13-208ENST00000482558 IQGAP2Q13576 1575 aa11.14□□□□□ -0.63
SNX13-208ENST00000482558 JUNDP17535 347 aa11.13□□□□□ -0.63
SNX13-208ENST00000482558 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms