RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 ARID3AQ99856 593 aa11.67□□□□□ -0.54
SPTA1-205ENST00000481212 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
SPTA1-205ENST00000481212 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
SPTA1-205ENST00000481212 LRRN4Q8WUT4 740 aa11.66□□□□□ -0.54
SPTA1-205ENST00000481212 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
SPTA1-205ENST00000481212 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
SPTA1-205ENST00000481212 TARBP1Q13395 1621 aaKnown RBP11.65□□□□□ -0.54
SPTA1-205ENST00000481212 FMNL1O95466 1100 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-205ENST00000481212 DESI1Q6ICB0 168 aa11.65□□□□□ -0.54
SPTA1-205ENST00000481212 BLOC1S3Q6QNY0 202 aa11.65□□□□□ -0.54
SPTA1-205ENST00000481212 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-205ENST00000481212 USB1Q9BQ65 265 aaKnown RBP11.65□□□□□ -0.54
SPTA1-205ENST00000481212 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
SPTA1-205ENST00000481212 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
SPTA1-205ENST00000481212 KCTD12Q96CX2 325 aaKnown RBP11.64□□□□□ -0.55
SPTA1-205ENST00000481212 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
SPTA1-205ENST00000481212 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
SPTA1-205ENST00000481212 CHD1O14646 1710 aa11.63□□□□□ -0.55
SPTA1-205ENST00000481212 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
SPTA1-205ENST00000481212 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
SPTA1-205ENST00000481212 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
SPTA1-205ENST00000481212 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
SPTA1-205ENST00000481212 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
SPTA1-205ENST00000481212 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
SPTA1-205ENST00000481212 LYPD8Q6UX82 237 aa11.6□□□□□ -0.55
SPTA1-205ENST00000481212 NYAP1Q6ZVC0 841 aa11.6□□□□□ -0.55
SPTA1-205ENST00000481212 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
SPTA1-205ENST00000481212 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 CUX1P39880 1505 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 COPS2P61201 443 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 NR6A1Q15406 480 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
SPTA1-205ENST00000481212 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
SPTA1-205ENST00000481212 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
SPTA1-205ENST00000481212 SPSB2Q99619 263 aa11.56□□□□□ -0.56
SPTA1-205ENST00000481212 JUNDP17535 347 aa11.55□□□□□ -0.56
SPTA1-205ENST00000481212 PTPN5P54829 565 aa11.55□□□□□ -0.56
SPTA1-205ENST00000481212 IRF5Q13568 498 aa11.55□□□□□ -0.56
SPTA1-205ENST00000481212 POTEMA6NI47 508 aa11.54□□□□□ -0.56
SPTA1-205ENST00000481212 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
SPTA1-205ENST00000481212 GAPVD1Q14C86 1478 aa11.53□□□□□ -0.56
SPTA1-205ENST00000481212 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
SPTA1-205ENST00000481212 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
SPTA1-205ENST00000481212 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.57
SPTA1-205ENST00000481212 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
SPTA1-205ENST00000481212 FAM160A2Q8N612 972 aaPredicted RBP11.52□□□□□ -0.57
SPTA1-205ENST00000481212 SYNJ1O43426 1573 aa11.52□□□□□ -0.57
SPTA1-205ENST00000481212 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
SPTA1-205ENST00000481212 ZPR1O75312 459 aa11.51□□□□□ -0.57
SPTA1-205ENST00000481212 PTPRNQ16849 979 aa11.51□□□□□ -0.57
SPTA1-205ENST00000481212 CTHP32929 405 aa11.49□□□□□ -0.57
SPTA1-205ENST00000481212 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
SPTA1-205ENST00000481212 MTRQ99707 1265 aa11.49□□□□□ -0.57
SPTA1-205ENST00000481212 GPR37L1O60883 481 aa11.48□□□□□ -0.57
SPTA1-205ENST00000481212 VAC14Q08AM6 782 aa11.48□□□□□ -0.57
SPTA1-205ENST00000481212 IL21Q9HBE4 155 aa11.48□□□□□ -0.57
SPTA1-205ENST00000481212 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
SPTA1-205ENST00000481212 MMP16P51512 607 aa11.47□□□□□ -0.57
SPTA1-205ENST00000481212 GLMNQ92990 594 aa11.47□□□□□ -0.57
SPTA1-205ENST00000481212 EVA1BQ9NVM1 165 aa11.47□□□□□ -0.57
SPTA1-205ENST00000481212 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
SPTA1-205ENST00000481212 ADH1BP00325 375 aa11.46□□□□□ -0.57
SPTA1-205ENST00000481212 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
SPTA1-205ENST00000481212 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
SPTA1-205ENST00000481212 FKBPLQ9UIM3 349 aa11.46□□□□□ -0.57
SPTA1-205ENST00000481212 CCNYL3P0C7X3 344 aa11.45□□□□□ -0.58
SPTA1-205ENST00000481212 NUDT12Q9BQG2 462 aa11.45□□□□□ -0.58
SPTA1-205ENST00000481212 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
SPTA1-205ENST00000481212 ZNF516Q92618 1163 aa11.44□□□□□ -0.58
SPTA1-205ENST00000481212 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
SPTA1-205ENST00000481212 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
SPTA1-205ENST00000481212 SOX11P35716 441 aa11.43□□□□□ -0.58
SPTA1-205ENST00000481212 ARMC2Q8NEN0 867 aa11.43□□□□□ -0.58
SPTA1-205ENST00000481212 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
SPTA1-205ENST00000481212 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
SPTA1-205ENST00000481212 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
SPTA1-205ENST00000481212 TLL1O43897 1013 aa11.42□□□□□ -0.58
SPTA1-205ENST00000481212 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
SPTA1-205ENST00000481212 ALG2Q9H553 416 aa11.42□□□□□ -0.58
SPTA1-205ENST00000481212 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
SPTA1-205ENST00000481212 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
SPTA1-205ENST00000481212 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
SPTA1-205ENST00000481212 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTA1-205ENST00000481212 NR1H3Q13133 447 aa11.41□□□□□ -0.58
SPTA1-205ENST00000481212 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
SPTA1-205ENST00000481212 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
SPTA1-205ENST00000481212 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
SPTA1-205ENST00000481212 ZBBXA8MT70 800 aa11.39□□□□□ -0.59
SPTA1-205ENST00000481212 FAM69CQ0P6D2 419 aa11.39□□□□□ -0.59
SPTA1-205ENST00000481212 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
SPTA1-205ENST00000481212 FHAD1B1AJZ9 1412 aa11.37□□□□□ -0.59
SPTA1-205ENST00000481212 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
SPTA1-205ENST00000481212 PTK2Q05397 1052 aa11.37□□□□□ -0.59
SPTA1-205ENST00000481212 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.59
SPTA1-205ENST00000481212 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
SPTA1-205ENST00000481212 PBRM1Q86U86 1689 aa11.36□□□□□ -0.59
SPTA1-205ENST00000481212 NUP160Q12769 1436 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms