RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 SPATA31A1Q5TZJ5 1347 aa24.42■■□□□ 1.5
HPS4-210ENST00000473782 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
HPS4-210ENST00000473782 CRYBG1Q9Y4K1 1723 aa24.41■■□□□ 1.5
HPS4-210ENST00000473782 FAM196AQ6ZSG2 479 aa24.41■■□□□ 1.5
HPS4-210ENST00000473782 PRR36Q9H6K5 1346 aa24.4■■□□□ 1.5
HPS4-210ENST00000473782 APBA3O96018 575 aa24.4■■□□□ 1.5
HPS4-210ENST00000473782 PARD3Q8TEW0 1356 aa24.4■■□□□ 1.5
HPS4-210ENST00000473782 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
HPS4-210ENST00000473782 ADGRB2O60241 1585 aa24.38■■□□□ 1.49
HPS4-210ENST00000473782 RREB1Q92766 1687 aa24.38■■□□□ 1.49
HPS4-210ENST00000473782 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
HPS4-210ENST00000473782 NUP188Q5SRE5 1749 aa24.35■■□□□ 1.49
HPS4-210ENST00000473782 PRDM11Q9NQV5 511 aa24.35■■□□□ 1.49
HPS4-210ENST00000473782 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
HPS4-210ENST00000473782 GPRASP1Q5JY77 1395 aa24.33■■□□□ 1.49
HPS4-210ENST00000473782 UTRNP46939 3433 aa24.33■■□□□ 1.49
HPS4-210ENST00000473782 KIAA0232Q92628 1395 aa24.32■■□□□ 1.48
HPS4-210ENST00000473782 CHRNA2Q15822 529 aa24.32■■□□□ 1.48
HPS4-210ENST00000473782 HIRIP3Q9BW71 556 aaPredicted RBP24.32■■□□□ 1.48
HPS4-210ENST00000473782 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
HPS4-210ENST00000473782 POGKQ9P215 609 aa24.3■■□□□ 1.48
HPS4-210ENST00000473782 KCNQ2O43526 872 aa24.29■■□□□ 1.48
HPS4-210ENST00000473782 SPON1Q9HCB6 807 aa24.29■■□□□ 1.48
HPS4-210ENST00000473782 STRN4Q9NRL3 753 aa24.29■■□□□ 1.48
HPS4-210ENST00000473782 NBPF8Q3BBV2 869 aa24.28■■□□□ 1.48
HPS4-210ENST00000473782 NBPF14Q5TI25 921 aa24.28■■□□□ 1.48
HPS4-210ENST00000473782 BARGINQ6ZT62 677 aa24.28■■□□□ 1.48
HPS4-210ENST00000473782 NINLQ9Y2I6 1382 aa24.28■■□□□ 1.48
HPS4-210ENST00000473782 ADGRB1O14514 1584 aa24.27■■□□□ 1.48
HPS4-210ENST00000473782 TULP4Q9NRJ4 1543 aa24.26■■□□□ 1.47
HPS4-210ENST00000473782 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
HPS4-210ENST00000473782 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
HPS4-210ENST00000473782 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
HPS4-210ENST00000473782 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
HPS4-210ENST00000473782 ZC3H6P61129 1189 aaKnown RBP24.24■■□□□ 1.47
HPS4-210ENST00000473782 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
HPS4-210ENST00000473782 PDE3BQ13370 1112 aa24.23■■□□□ 1.47
HPS4-210ENST00000473782 NGDNQ8NEJ9 315 aaKnown RBP24.23■■□□□ 1.47
HPS4-210ENST00000473782 PPP1R1BQ9UD71 204 aaPredicted RBP24.23■■□□□ 1.47
HPS4-210ENST00000473782 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
HPS4-210ENST00000473782 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
HPS4-210ENST00000473782 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
HPS4-210ENST00000473782 LARP1Q6PKG0 1096 aaKnown RBP24.21■■□□□ 1.47
HPS4-210ENST00000473782 ZNF784Q8NCA9 323 aaPredicted RBP24.19■■□□□ 1.46
HPS4-210ENST00000473782 PDGFDQ9GZP0 370 aaPredicted RBP24.19■■□□□ 1.46
HPS4-210ENST00000473782 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
HPS4-210ENST00000473782 NUTM2GQ5VZR2 741 aa24.18■■□□□ 1.46
HPS4-210ENST00000473782 TCP11L2Q8N4U5 519 aa24.18■■□□□ 1.46
HPS4-210ENST00000473782 ANO8Q9HCE9 1232 aaPredicted RBP24.18■■□□□ 1.46
HPS4-210ENST00000473782 ATP7BP35670 1465 aa24.15■■□□□ 1.46
HPS4-210ENST00000473782 EVA1CP58658 441 aa24.15■■□□□ 1.46
HPS4-210ENST00000473782 LMO7Q8WWI1 1683 aa24.15■■□□□ 1.46
HPS4-210ENST00000473782 CASZ1Q86V15 1759 aa24.14■■□□□ 1.46
HPS4-210ENST00000473782 DCAF8L1A6NGE4 600 aa24.14■■□□□ 1.45
HPS4-210ENST00000473782 PTF1AQ7RTS3 328 aa24.14■■□□□ 1.45
HPS4-210ENST00000473782 NUDT16Q96DE0 195 aaKnown RBP24.13■■□□□ 1.45
HPS4-210ENST00000473782 PEAK1Q9H792 1746 aa24.13■■□□□ 1.45
HPS4-210ENST00000473782 PLSCR1O15162 318 aa24.12■■□□□ 1.45
HPS4-210ENST00000473782 PTGER2P43116 358 aa24.12■■□□□ 1.45
HPS4-210ENST00000473782 PROM2Q8N271 834 aa24.12■■□□□ 1.45
HPS4-210ENST00000473782 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
HPS4-210ENST00000473782 THRAP3Q9Y2W1 955 aaKnown RBP24.11■■□□□ 1.45
HPS4-210ENST00000473782 CPDO75976 1380 aa24.11■■□□□ 1.45
HPS4-210ENST00000473782 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
HPS4-210ENST00000473782 POLR3AO14802 1390 aaPredicted RBP24.09■■□□□ 1.45
HPS4-210ENST00000473782 USP19O94966 1318 aa24.08■■□□□ 1.44
HPS4-210ENST00000473782 RGPD3A6NKT7 1758 aaPredicted RBP24.07■■□□□ 1.44
HPS4-210ENST00000473782 RGPD4Q7Z3J3 1758 aa24.07■■□□□ 1.44
HPS4-210ENST00000473782 ACEP12821 1306 aa24.07■■□□□ 1.44
HPS4-210ENST00000473782 ZBTB7AO95365 584 aa24.06■■□□□ 1.44
HPS4-210ENST00000473782 COL5A2P05997 1499 aaPredicted RBP24.06■■□□□ 1.44
HPS4-210ENST00000473782 MYOM1P52179 1685 aa24.05■■□□□ 1.44
HPS4-210ENST00000473782 OVOS2A0A0G2JMS6 1433 aa24.04■■□□□ 1.44
HPS4-210ENST00000473782 OVOS2A0A0J9YW53 1432 aa24.04■■□□□ 1.44
HPS4-210ENST00000473782 OVOS2Q6IE36 1432 aa24.04■■□□□ 1.44
HPS4-210ENST00000473782 SBF2Q86WG5 1849 aa24.03■■□□□ 1.44
HPS4-210ENST00000473782 PLEKHG3A1L390 1219 aa24.03■■□□□ 1.44
HPS4-210ENST00000473782 C11orf95C9JLR9 678 aaPredicted RBP24.03■■□□□ 1.44
HPS4-210ENST00000473782 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
HPS4-210ENST00000473782 ITSN1Q15811 1721 aa24.03■■□□□ 1.44
HPS4-210ENST00000473782 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
HPS4-210ENST00000473782 C1QTNF8P60827 252 aa24.02■■□□□ 1.44
HPS4-210ENST00000473782 SYT17Q9BSW7 474 aa24.02■■□□□ 1.44
HPS4-210ENST00000473782 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
HPS4-210ENST00000473782 ATF5Q9Y2D1 282 aaPredicted RBP24.02■■□□□ 1.44
HPS4-210ENST00000473782 GCP02774 474 aa24.01■■□□□ 1.43
HPS4-210ENST00000473782 ABTB2Q8N961 1025 aa24.01■■□□□ 1.43
HPS4-210ENST00000473782 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
HPS4-210ENST00000473782 TOPAZ1Q8N9V7 1692 aa24■■□□□ 1.43
HPS4-210ENST00000473782 FHDC1Q9C0D6 1143 aaPredicted RBP24■■□□□ 1.43
HPS4-210ENST00000473782 CRB1P82279 1406 aa24■■□□□ 1.43
HPS4-210ENST00000473782 LRRC37A3O60309 1634 aa23.99■■□□□ 1.43
HPS4-210ENST00000473782 KDM2AQ9Y2K7 1162 aa23.99■■□□□ 1.43
HPS4-210ENST00000473782 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
HPS4-210ENST00000473782 ARHGEF28Q8N1W1 1705 aaKnown RBP23.98■■□□□ 1.43
HPS4-210ENST00000473782 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
HPS4-210ENST00000473782 MARCH10Q8NA82 808 aaPredicted RBP23.98■■□□□ 1.43
HPS4-210ENST00000473782 BCL9O00512 1426 aa23.96■■□□□ 1.43
HPS4-210ENST00000473782 DCAF11Q8TEB1 546 aa23.96■■□□□ 1.43
HPS4-210ENST00000473782 DDB1Q16531 1140 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms