RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 TOPAZ1Q8N9V7 1692 aa9.53□□□□□ -0.88
CFHR1-204ENST00000472961 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
CFHR1-204ENST00000472961 CCDC9Q9Y3X0 531 aaKnown RBP9.53□□□□□ -0.88
CFHR1-204ENST00000472961 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
CFHR1-204ENST00000472961 RGPD5Q99666 1765 aa9.52□□□□□ -0.88
CFHR1-204ENST00000472961 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
CFHR1-204ENST00000472961 TRIM37O94972 964 aa9.52□□□□□ -0.89
CFHR1-204ENST00000472961 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
CFHR1-204ENST00000472961 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.89
CFHR1-204ENST00000472961 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.89
CFHR1-204ENST00000472961 AKAP12Q02952 1782 aa9.51□□□□□ -0.89
CFHR1-204ENST00000472961 PDGFDQ9GZP0 370 aaPredicted RBP9.51□□□□□ -0.89
CFHR1-204ENST00000472961 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
CFHR1-204ENST00000472961 ARHGEF10O15013 1369 aa9.5□□□□□ -0.89
CFHR1-204ENST00000472961 TUBGCP6Q96RT7 1819 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 A0A0G2JS52 829 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 MYT1Q01538 1121 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
CFHR1-204ENST00000472961 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 DLC1Q96QB1 1528 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 SPATA31A1Q5TZJ5 1347 aa9.49□□□□□ -0.89
CFHR1-204ENST00000472961 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
CFHR1-204ENST00000472961 COL18A1P39060 1754 aa9.48□□□□□ -0.89
CFHR1-204ENST00000472961 SHANK3Q9BYB0 1731 aa9.48□□□□□ -0.89
CFHR1-204ENST00000472961 ANKARQ7Z5J8 1434 aa9.48□□□□□ -0.89
CFHR1-204ENST00000472961 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
CFHR1-204ENST00000472961 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
CFHR1-204ENST00000472961 PTF1AQ7RTS3 328 aa9.47□□□□□ -0.89
CFHR1-204ENST00000472961 ZNF784Q8NCA9 323 aaPredicted RBP9.47□□□□□ -0.89
CFHR1-204ENST00000472961 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
CFHR1-204ENST00000472961 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
CFHR1-204ENST00000472961 NINLQ9Y2I6 1382 aa9.47□□□□□ -0.89
CFHR1-204ENST00000472961 PAPPAQ13219 1627 aa9.46□□□□□ -0.89
CFHR1-204ENST00000472961 HAP1P54257 671 aaPredicted RBP9.46□□□□□ -0.9
CFHR1-204ENST00000472961 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
CFHR1-204ENST00000472961 KIAA0232Q92628 1395 aa9.46□□□□□ -0.9
CFHR1-204ENST00000472961 ATP7BP35670 1465 aa9.46□□□□□ -0.9
CFHR1-204ENST00000472961 APBA3O96018 575 aa9.45□□□□□ -0.9
CFHR1-204ENST00000472961 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
CFHR1-204ENST00000472961 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
CFHR1-204ENST00000472961 ACIN1Q9UKV3 1341 aaKnown RBP9.45□□□□□ -0.9
CFHR1-204ENST00000472961 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
CFHR1-204ENST00000472961 KCNQ2O43526 872 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 PTGER2P43116 358 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 PSME1Q06323 249 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 SIRT1Q96EB6 747 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
CFHR1-204ENST00000472961 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
CFHR1-204ENST00000472961 FAM196AQ6ZSG2 479 aa9.43□□□□□ -0.9
CFHR1-204ENST00000472961 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
CFHR1-204ENST00000472961 QSER1Q2KHR3 1735 aa9.42□□□□□ -0.9
CFHR1-204ENST00000472961 IFFO2Q5TF58 517 aa9.42□□□□□ -0.9
CFHR1-204ENST00000472961 PROM2Q8N271 834 aa9.42□□□□□ -0.9
CFHR1-204ENST00000472961 HIRIP3Q9BW71 556 aaPredicted RBP9.42□□□□□ -0.9
CFHR1-204ENST00000472961 BTAF1O14981 1849 aa9.41□□□□□ -0.9
CFHR1-204ENST00000472961 SLC4A1APQ9BWU0 796 aaKnown RBP9.41□□□□□ -0.9
CFHR1-204ENST00000472961 SPON1Q9HCB6 807 aa9.41□□□□□ -0.9
CFHR1-204ENST00000472961 NHSQ6T4R5 1651 aa9.41□□□□□ -0.9
CFHR1-204ENST00000472961 COL5A2P05997 1499 aaPredicted RBP9.4□□□□□ -0.9
CFHR1-204ENST00000472961 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
CFHR1-204ENST00000472961 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
CFHR1-204ENST00000472961 SGIP1Q9BQI5 828 aa9.4□□□□□ -0.9
CFHR1-204ENST00000472961 PRDM11Q9NQV5 511 aa9.4□□□□□ -0.9
CFHR1-204ENST00000472961 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
CFHR1-204ENST00000472961 USP35Q9P2H5 1018 aa9.4□□□□□ -0.9
CFHR1-204ENST00000472961 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
CFHR1-204ENST00000472961 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
CFHR1-204ENST00000472961 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
CFHR1-204ENST00000472961 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
CFHR1-204ENST00000472961 ZC3H6P61129 1189 aaKnown RBP9.38□□□□□ -0.91
CFHR1-204ENST00000472961 NUTM2GQ5VZR2 741 aa9.38□□□□□ -0.91
CFHR1-204ENST00000472961 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
CFHR1-204ENST00000472961 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
CFHR1-204ENST00000472961 PPP1R1BQ9UD71 204 aaPredicted RBP9.37□□□□□ -0.91
CFHR1-204ENST00000472961 PCNTO95613 3336 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 FHDC1Q9C0D6 1143 aaPredicted RBP9.36□□□□□ -0.91
CFHR1-204ENST00000472961 OVOS2A0A0G2JMS6 1433 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 CPDO75976 1380 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 GPRASP1Q5JY77 1395 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 SLIT3O75094 1523 aa9.36□□□□□ -0.91
CFHR1-204ENST00000472961 USP19O94966 1318 aa9.35□□□□□ -0.91
CFHR1-204ENST00000472961 WASLO00401 505 aaPredicted RBP9.35□□□□□ -0.91
CFHR1-204ENST00000472961 NBPF8Q3BBV2 869 aa9.35□□□□□ -0.91
CFHR1-204ENST00000472961 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
CFHR1-204ENST00000472961 SYT17Q9BSW7 474 aa9.35□□□□□ -0.91
CFHR1-204ENST00000472961 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
CFHR1-204ENST00000472961 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
CFHR1-204ENST00000472961 PAK3O75914 559 aaPredicted RBP9.34□□□□□ -0.91
CFHR1-204ENST00000472961 TCP11L2Q8N4U5 519 aa9.34□□□□□ -0.91
CFHR1-204ENST00000472961 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
CFHR1-204ENST00000472961 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
CFHR1-204ENST00000472961 LY75O60449 1722 aa9.34□□□□□ -0.92
CFHR1-204ENST00000472961 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
CFHR1-204ENST00000472961 LTN1O94822 1766 aa9.33□□□□□ -0.92
CFHR1-204ENST00000472961 PLSCR1O15162 318 aa9.33□□□□□ -0.92
CFHR1-204ENST00000472961 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
CFHR1-204ENST00000472961 MPHOSPH9Q99550 1183 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms