RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 AKNAQ7Z591 1439 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
CHD6-206ENST00000470470 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
CHD6-206ENST00000470470 WFS1O76024 890 aa9.16□□□□□ -0.94
CHD6-206ENST00000470470 CENPBP07199 599 aaPredicted RBP9.16□□□□□ -0.94
CHD6-206ENST00000470470 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
CHD6-206ENST00000470470 ERCC6Q03468 1493 aa9.15□□□□□ -0.94
CHD6-206ENST00000470470 UACAQ9BZF9 1416 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 PPEF1O14829 653 aaPredicted RBP9.14□□□□□ -0.95
CHD6-206ENST00000470470 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 SLC6A16Q9GZN6 736 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 GCC2Q8IWJ2 1684 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 RAPGEF6Q8TEU7 1601 aa9.14□□□□□ -0.95
CHD6-206ENST00000470470 NAIPQ13075 1403 aa9.13□□□□□ -0.95
CHD6-206ENST00000470470 PTPRKQ15262 1439 aa9.13□□□□□ -0.95
CHD6-206ENST00000470470 WIPF1O43516 503 aa9.13□□□□□ -0.95
CHD6-206ENST00000470470 NUP160Q12769 1436 aa9.13□□□□□ -0.95
CHD6-206ENST00000470470 SLC10A3P09131 477 aa9.12□□□□□ -0.95
CHD6-206ENST00000470470 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
CHD6-206ENST00000470470 CEP170Q5SW79 1584 aa9.11□□□□□ -0.95
CHD6-206ENST00000470470 FCHSD2O94868 740 aa9.11□□□□□ -0.95
CHD6-206ENST00000470470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD6-206ENST00000470470 CRIPAKQ8N1N5 446 aa9.11□□□□□ -0.95
CHD6-206ENST00000470470 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
CHD6-206ENST00000470470 NUP153P49790 1475 aaKnown RBP9.1□□□□□ -0.95
CHD6-206ENST00000470470 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
CHD6-206ENST00000470470 ADCY10Q96PN6 1610 aa9.1□□□□□ -0.95
CHD6-206ENST00000470470 PPP1R15AO75807 674 aaPredicted RBP9.09□□□□□ -0.95
CHD6-206ENST00000470470 OATP04181 439 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 NEUROD1Q13562 356 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 PXYLP1Q8TE99 480 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
CHD6-206ENST00000470470 ROCK1Q13464 1354 aa9.09□□□□□ -0.95
CHD6-206ENST00000470470 LOC100996750A0A140TA64 210 aa9.08□□□□□ -0.96
CHD6-206ENST00000470470 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
CHD6-206ENST00000470470 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
CHD6-206ENST00000470470 KRTAP4-6Q9BYQ5 205 aa9.08□□□□□ -0.96
CHD6-206ENST00000470470 CARMIL2Q6F5E8 1435 aa9.08□□□□□ -0.96
CHD6-206ENST00000470470 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
CHD6-206ENST00000470470 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
CHD6-206ENST00000470470 CHMP7Q8WUX9 453 aaPredicted RBP9.07□□□□□ -0.96
CHD6-206ENST00000470470 ITSN2Q9NZM3 1697 aa9.07□□□□□ -0.96
CHD6-206ENST00000470470 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
CHD6-206ENST00000470470 TROQ12816 1431 aaPredicted RBP9.07□□□□□ -0.96
CHD6-206ENST00000470470 SPSB2Q99619 263 aa9.06□□□□□ -0.96
CHD6-206ENST00000470470 RPIAP49247 311 aa9.05□□□□□ -0.96
CHD6-206ENST00000470470 SIN3AQ96ST3 1273 aa9.05□□□□□ -0.96
CHD6-206ENST00000470470 PKD2L1Q9P0L9 805 aa9.05□□□□□ -0.96
CHD6-206ENST00000470470 ABCA8O94911 1581 aa9.05□□□□□ -0.96
CHD6-206ENST00000470470 GMPR2Q9P2T1 348 aaKnown RBP9.05□□□□□ -0.96
CHD6-206ENST00000470470 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
CHD6-206ENST00000470470 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
CHD6-206ENST00000470470 AVPP01185 164 aa9.04□□□□□ -0.96
CHD6-206ENST00000470470 HIC1Q14526 733 aa9.04□□□□□ -0.96
CHD6-206ENST00000470470 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
CHD6-206ENST00000470470 GPIHBP1Q8IV16 184 aa9.04□□□□□ -0.96
CHD6-206ENST00000470470 DAPK1P53355 1430 aa9.03□□□□□ -0.96
CHD6-206ENST00000470470 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
CHD6-206ENST00000470470 ADGBQ8N7X0 1667 aa9.02□□□□□ -0.96
CHD6-206ENST00000470470 ABCC5O15440 1437 aa9.02□□□□□ -0.97
CHD6-206ENST00000470470 DENND4BO75064 1496 aaPredicted RBP9.02□□□□□ -0.97
CHD6-206ENST00000470470 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 KDM5BQ9UGL1 1544 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 GPATCH8Q9UKJ3 1502 aaKnown RBP9.01□□□□□ -0.97
CHD6-206ENST00000470470 ADGRL2O95490 1459 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 PLB1Q6P1J6 1458 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 AXIN1O15169 862 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 FOXC1Q12948 553 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 RBM26Q5T8P6 1007 aaKnown RBP9.01□□□□□ -0.97
CHD6-206ENST00000470470 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
CHD6-206ENST00000470470 CROCC2H7BZ55 1655 aa9□□□□□ -0.97
CHD6-206ENST00000470470 KDM6BO15054 1643 aa9□□□□□ -0.97
CHD6-206ENST00000470470 FCF1Q9Y324 198 aaKnown RBP9□□□□□ -0.97
CHD6-206ENST00000470470 SHROOM2Q13796 1616 aa8.99□□□□□ -0.97
CHD6-206ENST00000470470 ATP10BO94823 1461 aa8.99□□□□□ -0.97
CHD6-206ENST00000470470 PRG4Q92954 1404 aaPredicted RBP8.99□□□□□ -0.97
CHD6-206ENST00000470470 CD2BP2O95400 341 aaKnown RBP8.99□□□□□ -0.97
CHD6-206ENST00000470470 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
CHD6-206ENST00000470470 MORN1Q5T089 497 aa8.99□□□□□ -0.97
CHD6-206ENST00000470470 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
CHD6-206ENST00000470470 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
CHD6-206ENST00000470470 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
CHD6-206ENST00000470470 ABCC10Q5T3U5 1492 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 CDC42BPAQ5VT25 1732 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 FMNL1O95466 1100 aaPredicted RBP8.98□□□□□ -0.97
CHD6-206ENST00000470470 MPHOSPH9Q99550 1183 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
CHD6-206ENST00000470470 GTF3C3Q9Y5Q9 886 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 KIF14Q15058 1648 aa8.98□□□□□ -0.97
CHD6-206ENST00000470470 CAMSAP2Q08AD1 1489 aa8.97□□□□□ -0.97
CHD6-206ENST00000470470 NCOA1Q15788 1441 aa8.97□□□□□ -0.97
CHD6-206ENST00000470470 CHD1O14646 1710 aa8.97□□□□□ -0.97
CHD6-206ENST00000470470 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
CHD6-206ENST00000470470 CYP4X1Q8N118 509 aa8.97□□□□□ -0.97
CHD6-206ENST00000470470 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms