RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
STRC-208ENST00000470279 SAFB2Q14151 953 aaKnown RBP eCLIP21.49■■□□□ 1.03
STRC-208ENST00000470279 TRIM37O94972 964 aa21.48■■□□□ 1.03
STRC-208ENST00000470279 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
STRC-208ENST00000470279 C14orf93Q9H972 538 aaKnown RBP21.48■■□□□ 1.03
STRC-208ENST00000470279 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
STRC-208ENST00000470279 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
STRC-208ENST00000470279 DLC1Q96QB1 1528 aa21.45■■□□□ 1.02
STRC-208ENST00000470279 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
STRC-208ENST00000470279 GPRASP1Q5JY77 1395 aa21.45■■□□□ 1.02
STRC-208ENST00000470279 APBA3O96018 575 aa21.44■■□□□ 1.02
STRC-208ENST00000470279 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
STRC-208ENST00000470279 CFAP70Q5T0N1 1121 aa21.43■■□□□ 1.02
STRC-208ENST00000470279 PRDM11Q9NQV5 511 aa21.43■■□□□ 1.02
STRC-208ENST00000470279 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
STRC-208ENST00000470279 POGKQ9P215 609 aa21.4■■□□□ 1.02
STRC-208ENST00000470279 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
STRC-208ENST00000470279 TULP4Q9NRJ4 1543 aa21.39■■□□□ 1.02
STRC-208ENST00000470279 KIAA0232Q92628 1395 aa21.39■■□□□ 1.02
STRC-208ENST00000470279 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
STRC-208ENST00000470279 NBPF14Q5TI25 921 aa21.38■■□□□ 1.01
STRC-208ENST00000470279 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
STRC-208ENST00000470279 NINLQ9Y2I6 1382 aa21.37■■□□□ 1.01
STRC-208ENST00000470279 HIRIP3Q9BW71 556 aaPredicted RBP21.37■■□□□ 1.01
STRC-208ENST00000470279 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
STRC-208ENST00000470279 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 MPHOSPH9Q99550 1183 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 SPON1Q9HCB6 807 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 STRN4Q9NRL3 753 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 CAMTA1Q9Y6Y1 1673 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
STRC-208ENST00000470279 PAK3O75914 559 aaPredicted RBP21.35■■□□□ 1.01
STRC-208ENST00000470279 KCNQ2O43526 872 aa21.34■■□□□ 1.01
STRC-208ENST00000470279 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
STRC-208ENST00000470279 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
STRC-208ENST00000470279 BARGINQ6ZT62 677 aa21.33■■□□□ 1.01
STRC-208ENST00000470279 NGDNQ8NEJ9 315 aaKnown RBP21.33■■□□□ 1.01
STRC-208ENST00000470279 USP35Q9P2H5 1018 aa21.33■■□□□ 1.01
STRC-208ENST00000470279 SSH2Q76I76 1423 aa21.32■■□□□ 1
STRC-208ENST00000470279 PDE3BQ13370 1112 aa21.32■■□□□ 1
STRC-208ENST00000470279 ITSN1Q15811 1721 aa21.32■■□□□ 1
STRC-208ENST00000470279 WASLO00401 505 aaPredicted RBP21.3■■□□□ 1
STRC-208ENST00000470279 ATP7BP35670 1465 aa21.3■■□□□ 1
STRC-208ENST00000470279 ZC3H6P61129 1189 aaKnown RBP21.29■■□□□ 1
STRC-208ENST00000470279 TRAK1Q9UPV9 953 aa21.29■■□□□ 1
STRC-208ENST00000470279 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
STRC-208ENST00000470279 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
STRC-208ENST00000470279 CASZ1Q86V15 1759 aa21.28■■□□□ 1
STRC-208ENST00000470279 NRKQ7Z2Y5 1582 aa21.27■■□□□ 1
STRC-208ENST00000470279 PARP4Q9UKK3 1724 aaKnown RBP21.27■■□□□ 1
STRC-208ENST00000470279 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
STRC-208ENST00000470279 EVA1CP58658 441 aa21.26■□□□□ 0.99
STRC-208ENST00000470279 TCP11L2Q8N4U5 519 aa21.26■□□□□ 0.99
STRC-208ENST00000470279 NUTM2GQ5VZR2 741 aa21.25■□□□□ 0.99
STRC-208ENST00000470279 LARP1Q6PKG0 1096 aaKnown RBP21.25■□□□□ 0.99
STRC-208ENST00000470279 UTRNP46939 3433 aa21.25■□□□□ 0.99
STRC-208ENST00000470279 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
STRC-208ENST00000470279 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
STRC-208ENST00000470279 MYOM1P52179 1685 aa21.21■□□□□ 0.99
STRC-208ENST00000470279 ZNF784Q8NCA9 323 aaPredicted RBP21.21■□□□□ 0.99
STRC-208ENST00000470279 ANO8Q9HCE9 1232 aaPredicted RBP21.21■□□□□ 0.99
STRC-208ENST00000470279 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
STRC-208ENST00000470279 CPDO75976 1380 aa21.21■□□□□ 0.99
STRC-208ENST00000470279 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
STRC-208ENST00000470279 NUDT16Q96DE0 195 aaKnown RBP21.2■□□□□ 0.98
STRC-208ENST00000470279 THRAP3Q9Y2W1 955 aaKnown RBP21.2■□□□□ 0.98
STRC-208ENST00000470279 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.98
STRC-208ENST00000470279 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
STRC-208ENST00000470279 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
STRC-208ENST00000470279 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
STRC-208ENST00000470279 POLR3AO14802 1390 aaPredicted RBP21.18■□□□□ 0.98
STRC-208ENST00000470279 LRRC37A3O60309 1634 aa21.18■□□□□ 0.98
STRC-208ENST00000470279 PDGFDQ9GZP0 370 aaPredicted RBP21.17■□□□□ 0.98
STRC-208ENST00000470279 COL5A2P05997 1499 aaPredicted RBP21.17■□□□□ 0.98
STRC-208ENST00000470279 USP19O94966 1318 aa21.16■□□□□ 0.98
STRC-208ENST00000470279 PLSCR1O15162 318 aa21.16■□□□□ 0.98
STRC-208ENST00000470279 CHD4Q14839 1912 aa21.15■□□□□ 0.98
STRC-208ENST00000470279 ACEP12821 1306 aa21.14■□□□□ 0.97
STRC-208ENST00000470279 ZBTB7AO95365 584 aa21.14■□□□□ 0.97
STRC-208ENST00000470279 PTGER2P43116 358 aa21.14■□□□□ 0.97
STRC-208ENST00000470279 CRB1P82279 1406 aa21.13■□□□□ 0.97
STRC-208ENST00000470279 SENP3-EIF4A1A0A087X0R7 540 aa21.13■□□□□ 0.97
STRC-208ENST00000470279 PTF1AQ7RTS3 328 aa21.12■□□□□ 0.97
STRC-208ENST00000470279 ABTB2Q8N961 1025 aa21.12■□□□□ 0.97
STRC-208ENST00000470279 WNK3Q9BYP7 1800 aa21.11■□□□□ 0.97
STRC-208ENST00000470279 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
STRC-208ENST00000470279 PROM2Q8N271 834 aa21.1■□□□□ 0.97
STRC-208ENST00000470279 BCL11BQ9C0K0 894 aaPredicted RBP21.1■□□□□ 0.97
STRC-208ENST00000470279 KDM2AQ9Y2K7 1162 aa21.1■□□□□ 0.97
STRC-208ENST00000470279 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
STRC-208ENST00000470279 GCP02774 474 aa21.08■□□□□ 0.97
STRC-208ENST00000470279 C1QTNF8P60827 252 aa21.08■□□□□ 0.97
STRC-208ENST00000470279 ATF5Q9Y2D1 282 aaPredicted RBP21.08■□□□□ 0.97
STRC-208ENST00000470279 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
STRC-208ENST00000470279 AKAP12Q02952 1782 aa21.08■□□□□ 0.96
STRC-208ENST00000470279 DDB1Q16531 1140 aa21.07■□□□□ 0.96
STRC-208ENST00000470279 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
STRC-208ENST00000470279 SYT17Q9BSW7 474 aa21.07■□□□□ 0.96
STRC-208ENST00000470279 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
STRC-208ENST00000470279 NLRP13Q86W25 1043 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms