RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
PRPF3-203ENST00000467514 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
PRPF3-203ENST00000467514 TRIM37O94972 964 aa15.87■□□□□ 0.13
PRPF3-203ENST00000467514 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
PRPF3-203ENST00000467514 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
PRPF3-203ENST00000467514 APBA3O96018 575 aa15.86■□□□□ 0.13
PRPF3-203ENST00000467514 SPATA31A5Q5VU36 1347 aa15.86■□□□□ 0.13
PRPF3-203ENST00000467514 SPATA31A7Q8IWB4 1347 aa15.86■□□□□ 0.13
PRPF3-203ENST00000467514 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
PRPF3-203ENST00000467514 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
PRPF3-203ENST00000467514 THSD7AQ9UPZ6 1657 aa15.85■□□□□ 0.13
PRPF3-203ENST00000467514 NBPF8Q3BBV2 869 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 FAM196AQ6ZSG2 479 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 STRN4Q9NRL3 753 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 TIMELESSQ9UNS1 1208 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 TRPM3Q9HCF6 1732 aaPredicted RBP15.84■□□□□ 0.13
PRPF3-203ENST00000467514 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 ANKARQ7Z5J8 1434 aa15.84■□□□□ 0.13
PRPF3-203ENST00000467514 SIRT1Q96EB6 747 aa15.83■□□□□ 0.12
PRPF3-203ENST00000467514 USP35Q9P2H5 1018 aa15.83■□□□□ 0.12
PRPF3-203ENST00000467514 ALS2Q96Q42 1657 aa15.83■□□□□ 0.12
PRPF3-203ENST00000467514 NGDNQ8NEJ9 315 aaKnown RBP15.82■□□□□ 0.12
PRPF3-203ENST00000467514 HIRIP3Q9BW71 556 aaPredicted RBP15.82■□□□□ 0.12
PRPF3-203ENST00000467514 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
PRPF3-203ENST00000467514 PARD3Q8TEW0 1356 aa15.82■□□□□ 0.12
PRPF3-203ENST00000467514 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
PRPF3-203ENST00000467514 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
PRPF3-203ENST00000467514 CAMKK2Q96RR4 588 aa15.8■□□□□ 0.12
PRPF3-203ENST00000467514 EVA1CP58658 441 aa15.79■□□□□ 0.12
PRPF3-203ENST00000467514 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
PRPF3-203ENST00000467514 NUP188Q5SRE5 1749 aa15.79■□□□□ 0.12
PRPF3-203ENST00000467514 RREB1Q92766 1687 aa15.79■□□□□ 0.12
PRPF3-203ENST00000467514 SPATA31A1Q5TZJ5 1347 aa15.78■□□□□ 0.12
PRPF3-203ENST00000467514 MINK1Q8N4C8 1332 aaPredicted RBP15.78■□□□□ 0.12
PRPF3-203ENST00000467514 CHRNA2Q15822 529 aa15.78■□□□□ 0.12
PRPF3-203ENST00000467514 SPON1Q9HCB6 807 aa15.78■□□□□ 0.12
PRPF3-203ENST00000467514 KIAA0232Q92628 1395 aa15.77■□□□□ 0.12
PRPF3-203ENST00000467514 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
PRPF3-203ENST00000467514 NEUROD1Q13562 356 aa15.76■□□□□ 0.11
PRPF3-203ENST00000467514 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
PRPF3-203ENST00000467514 DLC1Q96QB1 1528 aa15.76■□□□□ 0.11
PRPF3-203ENST00000467514 TULP4Q9NRJ4 1543 aa15.76■□□□□ 0.11
PRPF3-203ENST00000467514 ITSN1Q15811 1721 aa15.76■□□□□ 0.11
PRPF3-203ENST00000467514 ZC3H6P61129 1189 aaKnown RBP15.75■□□□□ 0.11
PRPF3-203ENST00000467514 PHRF1Q9P1Y6 1649 aaKnown RBP15.75■□□□□ 0.11
PRPF3-203ENST00000467514 KCNQ2O43526 872 aa15.74■□□□□ 0.11
PRPF3-203ENST00000467514 NINLQ9Y2I6 1382 aa15.74■□□□□ 0.11
PRPF3-203ENST00000467514 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
PRPF3-203ENST00000467514 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
PRPF3-203ENST00000467514 WASLO00401 505 aaPredicted RBP15.71■□□□□ 0.11
PRPF3-203ENST00000467514 ATP7BP35670 1465 aa15.71■□□□□ 0.1
PRPF3-203ENST00000467514 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
PRPF3-203ENST00000467514 SSH2Q76I76 1423 aa15.7■□□□□ 0.1
PRPF3-203ENST00000467514 TONSLQ96HA7 1378 aa15.7■□□□□ 0.1
PRPF3-203ENST00000467514 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
PRPF3-203ENST00000467514 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
PRPF3-203ENST00000467514 BARGINQ6ZT62 677 aa15.68■□□□□ 0.1
PRPF3-203ENST00000467514 LARP1Q6PKG0 1096 aaKnown RBP15.67■□□□□ 0.1
PRPF3-203ENST00000467514 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
PRPF3-203ENST00000467514 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
PRPF3-203ENST00000467514 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
PRPF3-203ENST00000467514 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-203ENST00000467514 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
PRPF3-203ENST00000467514 OVOS2A0A0G2JMS6 1433 aa15.65■□□□□ 0.1
PRPF3-203ENST00000467514 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
PRPF3-203ENST00000467514 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
PRPF3-203ENST00000467514 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
PRPF3-203ENST00000467514 ABTB2Q8N961 1025 aa15.64■□□□□ 0.09
PRPF3-203ENST00000467514 L3MBTL2Q969R5 705 aa15.64■□□□□ 0.09
PRPF3-203ENST00000467514 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
PRPF3-203ENST00000467514 PARP4Q9UKK3 1724 aaKnown RBP15.64■□□□□ 0.09
PRPF3-203ENST00000467514 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
PRPF3-203ENST00000467514 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
PRPF3-203ENST00000467514 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
PRPF3-203ENST00000467514 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
PRPF3-203ENST00000467514 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
PRPF3-203ENST00000467514 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
PRPF3-203ENST00000467514 MYOM1P52179 1685 aa15.6■□□□□ 0.09
PRPF3-203ENST00000467514 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
PRPF3-203ENST00000467514 ACEP12821 1306 aa15.6■□□□□ 0.09
PRPF3-203ENST00000467514 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
PRPF3-203ENST00000467514 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
PRPF3-203ENST00000467514 DDB1Q16531 1140 aa15.59■□□□□ 0.09
PRPF3-203ENST00000467514 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
PRPF3-203ENST00000467514 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
PRPF3-203ENST00000467514 LMO7Q8WWI1 1683 aa15.59■□□□□ 0.09
PRPF3-203ENST00000467514 CRB1P82279 1406 aa15.59■□□□□ 0.09
PRPF3-203ENST00000467514 CHD4Q14839 1912 aa15.58■□□□□ 0.09
PRPF3-203ENST00000467514 AKAP12Q02952 1782 aa15.58■□□□□ 0.08
PRPF3-203ENST00000467514 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
PRPF3-203ENST00000467514 NLRP13Q86W25 1043 aa15.58■□□□□ 0.08
PRPF3-203ENST00000467514 CDK19Q9BWU1 502 aa15.58■□□□□ 0.08
PRPF3-203ENST00000467514 STK32BQ9NY57 414 aa15.58■□□□□ 0.08
PRPF3-203ENST00000467514 CPDO75976 1380 aa15.58■□□□□ 0.08
PRPF3-203ENST00000467514 COL5A2P05997 1499 aaPredicted RBP15.58■□□□□ 0.08
PRPF3-203ENST00000467514 LRRC37A3O60309 1634 aa15.57■□□□□ 0.08
PRPF3-203ENST00000467514 TOPAZ1Q8N9V7 1692 aa15.57■□□□□ 0.08
PRPF3-203ENST00000467514 TOM1L2Q6ZVM7 507 aa15.57■□□□□ 0.08
PRPF3-203ENST00000467514 PLSCR1O15162 318 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms