RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-205	ENST00000466416	PRDM11	Q9NQV5	511 aa		13.92	□□□□□ -0.18
ABCF3-205	ENST00000466416	ABCA3	Q99758	1704 aa		13.92	□□□□□ -0.18
ABCF3-205	ENST00000466416	SENP3-EIF4A1	A0A087X0R7	540 aa		13.91	□□□□□ -0.18
ABCF3-205	ENST00000466416	PDE3B	Q13370	1112 aa		13.91	□□□□□ -0.18
ABCF3-205	ENST00000466416	RGL3	Q3MIN7	710 aa		13.91	□□□□□ -0.18
ABCF3-205	ENST00000466416	GPRASP1	Q5JY77	1395 aa		13.91	□□□□□ -0.18
ABCF3-205	ENST00000466416	KNDC1	Q76NI1	1749 aa		13.9	□□□□□ -0.18
ABCF3-205	ENST00000466416	ANKAR	Q7Z5J8	1434 aa		13.9	□□□□□ -0.19
ABCF3-205	ENST00000466416	BARGIN	Q6ZT62	677 aa		13.89	□□□□□ -0.19
ABCF3-205	ENST00000466416	C11orf95	C9JLR9	678 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCF3-205	ENST00000466416	C1QTNF8	P60827	252 aa		13.88	□□□□□ -0.19
ABCF3-205	ENST00000466416	C14orf93	Q9H972	538 aa	Known RBP	13.88	□□□□□ -0.19
ABCF3-205	ENST00000466416	RGPD8	O14715	1765 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCF3-205	ENST00000466416	DHX57	Q6P158	1386 aa	Known RBP	13.87	□□□□□ -0.19
ABCF3-205	ENST00000466416	PRAM1	Q96QH2	718 aa		13.87	□□□□□ -0.19
ABCF3-205	ENST00000466416	PIK3C2G	O75747	1445 aa		13.87	□□□□□ -0.19
ABCF3-205	ENST00000466416	ACIN1	Q9UKV3	1341 aa	Known RBP	13.87	□□□□□ -0.19
ABCF3-205	ENST00000466416	RREB1	Q92766	1687 aa		13.86	□□□□□ -0.19
ABCF3-205	ENST00000466416	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
ABCF3-205	ENST00000466416	STRN4	Q9NRL3	753 aa		13.86	□□□□□ -0.19
ABCF3-205	ENST00000466416	IFT172	Q9UG01	1749 aa		13.85	□□□□□ -0.19
ABCF3-205	ENST00000466416	SPATA31E1	Q6ZUB1	1445 aa		13.85	□□□□□ -0.19
ABCF3-205	ENST00000466416	POGK	Q9P215	609 aa		13.85	□□□□□ -0.19
ABCF3-205	ENST00000466416	NUP188	Q5SRE5	1749 aa		13.84	□□□□□ -0.19
ABCF3-205	ENST00000466416	PAK3	O75914	559 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCF3-205	ENST00000466416	EVA1C	P58658	441 aa		13.84	□□□□□ -0.19
ABCF3-205	ENST00000466416	USP35	Q9P2H5	1018 aa		13.84	□□□□□ -0.19
ABCF3-205	ENST00000466416	KIAA0232	Q92628	1395 aa		13.83	□□□□□ -0.19
ABCF3-205	ENST00000466416	PLSCR1	O15162	318 aa		13.83	□□□□□ -0.2
ABCF3-205	ENST00000466416	CHRNA2	Q15822	529 aa		13.83	□□□□□ -0.2
ABCF3-205	ENST00000466416	NGDN	Q8NEJ9	315 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-205	ENST00000466416	EIF3A	Q14152	1382 aa	Known RBP	13.83	□□□□□ -0.2
ABCF3-205	ENST00000466416	ALS2	Q96Q42	1657 aa		13.82	□□□□□ -0.2
ABCF3-205	ENST00000466416	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.82	□□□□□ -0.2
ABCF3-205	ENST00000466416	TCP11L2	Q8N4U5	519 aa		13.82	□□□□□ -0.2
ABCF3-205	ENST00000466416	THRAP3	Q9Y2W1	955 aa	Known RBP	13.82	□□□□□ -0.2
ABCF3-205	ENST00000466416	CFAP70	Q5T0N1	1121 aa		13.81	□□□□□ -0.2
ABCF3-205	ENST00000466416	ZC3H6	P61129	1189 aa	Known RBP	13.8	□□□□□ -0.2
ABCF3-205	ENST00000466416	CAMTA1	Q9Y6Y1	1673 aa		13.79	□□□□□ -0.2
ABCF3-205	ENST00000466416	PTGER2	P43116	358 aa		13.79	□□□□□ -0.2
ABCF3-205	ENST00000466416	SYT17	Q9BSW7	474 aa		13.79	□□□□□ -0.2
ABCF3-205	ENST00000466416	PRR36	Q9H6K5	1346 aa		13.79	□□□□□ -0.2
ABCF3-205	ENST00000466416	SSH2	Q76I76	1423 aa		13.79	□□□□□ -0.2
ABCF3-205	ENST00000466416	WASL	O00401	505 aa	Predicted RBP	13.78	□□□□□ -0.2
ABCF3-205	ENST00000466416	ZBTB7A	O95365	584 aa		13.78	□□□□□ -0.2
ABCF3-205	ENST00000466416	LARP1	Q6PKG0	1096 aa	Known RBP	13.78	□□□□□ -0.2
ABCF3-205	ENST00000466416	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.78	□□□□□ -0.2
ABCF3-205	ENST00000466416	DLC1	Q96QB1	1528 aa		13.77	□□□□□ -0.21
ABCF3-205	ENST00000466416	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCF3-205	ENST00000466416	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.77	□□□□□ -0.21
ABCF3-205	ENST00000466416	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCF3-205	ENST00000466416	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCF3-205	ENST00000466416	CRYBG1	Q9Y4K1	1723 aa		13.76	□□□□□ -0.21
ABCF3-205	ENST00000466416	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-205	ENST00000466416	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-205	ENST00000466416	NRK	Q7Z2Y5	1582 aa		13.75	□□□□□ -0.21
ABCF3-205	ENST00000466416	OVOS2	A0A0G2JMS6	1433 aa		13.74	□□□□□ -0.21
ABCF3-205	ENST00000466416	OVOS2	A0A0J9YW53	1432 aa		13.74	□□□□□ -0.21
ABCF3-205	ENST00000466416	OVOS2	Q6IE36	1432 aa		13.74	□□□□□ -0.21
ABCF3-205	ENST00000466416	TULP4	Q9NRJ4	1543 aa		13.74	□□□□□ -0.21
ABCF3-205	ENST00000466416	GIGYF1	O75420	1035 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	PROM2	Q8N271	834 aa		13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	MTFR1L	Q9H019	292 aa		13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	STK32B	Q9NY57	414 aa		13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	TRAK1	Q9UPV9	953 aa		13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	ATP7B	P35670	1465 aa		13.73	□□□□□ -0.21
ABCF3-205	ENST00000466416	CPD	O75976	1380 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	CHD4	Q14839	1912 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	UTRN	P46939	3433 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	NUTM2G	Q5VZR2	741 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	MPHOSPH9	Q99550	1183 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	CASZ1	Q86V15	1759 aa		13.72	□□□□□ -0.21
ABCF3-205	ENST00000466416	SLC15A2	Q16348	729 aa		13.71	□□□□□ -0.21
ABCF3-205	ENST00000466416	NUDT16	Q96DE0	195 aa	Known RBP	13.71	□□□□□ -0.21
ABCF3-205	ENST00000466416	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.71	□□□□□ -0.22
ABCF3-205	ENST00000466416	RGPD4	Q7Z3J3	1758 aa		13.71	□□□□□ -0.22
ABCF3-205	ENST00000466416	DDB1	Q16531	1140 aa		13.7	□□□□□ -0.22
ABCF3-205	ENST00000466416	SGIP1	Q9BQI5	828 aa		13.7	□□□□□ -0.22
ABCF3-205	ENST00000466416	ABTB2	Q8N961	1025 aa		13.69	□□□□□ -0.22
ABCF3-205	ENST00000466416	ARX	Q96QS3	562 aa		13.69	□□□□□ -0.22
ABCF3-205	ENST00000466416	MYOM1	P52179	1685 aa		13.69	□□□□□ -0.22
ABCF3-205	ENST00000466416	PARP4	Q9UKK3	1724 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	CRB1	P82279	1406 aa		13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	GPR162	Q16538	588 aa		13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	TXNRD1	Q16881	649 aa		13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	MAP3K5	Q99683	1374 aa		13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.68	□□□□□ -0.22
ABCF3-205	ENST00000466416	BCL9	O00512	1426 aa		13.67	□□□□□ -0.22
ABCF3-205	ENST00000466416	GC	P02774	474 aa		13.67	□□□□□ -0.22
ABCF3-205	ENST00000466416	PTF1A	Q7RTS3	328 aa		13.67	□□□□□ -0.22
ABCF3-205	ENST00000466416	NLRP13	Q86W25	1043 aa		13.67	□□□□□ -0.22
ABCF3-205	ENST00000466416	USP19	O94966	1318 aa		13.66	□□□□□ -0.22
ABCF3-205	ENST00000466416	ACE	P12821	1306 aa		13.66	□□□□□ -0.22
ABCF3-205	ENST00000466416	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.66	□□□□□ -0.22
ABCF3-205	ENST00000466416	PEAK1	Q9H792	1746 aa		13.66	□□□□□ -0.22
ABCF3-205	ENST00000466416	POLR3A	O14802	1390 aa	Predicted RBP	13.66	□□□□□ -0.22
ABCF3-205	ENST00000466416	PLEKHG3	A1L390	1219 aa		13.65	□□□□□ -0.22
ABCF3-205	ENST00000466416	MARCH10	Q8NA82	808 aa	Predicted RBP	13.65	□□□□□ -0.22
ABCF3-205	ENST00000466416	CCDC61	Q9Y6R9	512 aa		13.65	□□□□□ -0.22

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