RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 FAM205CA6NFA0 338 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 ATP9BO43861 1147 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 ST18O60284 1047 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 ATG7O95352 703 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 EMP3P54852 163 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 DESI1Q6ICB0 168 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 IVNS1ABPQ9Y6Y0 642 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
CDK13-203ENST00000465643 KCNA1Q09470 495 aa7.59□□□□□ -1.19
CDK13-203ENST00000465643 NR1H3Q13133 447 aa7.59□□□□□ -1.19
CDK13-203ENST00000465643 KANK4Q5T7N3 995 aaPredicted RBP7.59□□□□□ -1.19
CDK13-203ENST00000465643 MRPL50Q8N5N7 158 aaKnown RBP7.59□□□□□ -1.19
CDK13-203ENST00000465643 LRCH3Q96II8 777 aa7.59□□□□□ -1.19
CDK13-203ENST00000465643 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
CDK13-203ENST00000465643 POTEB3A0JP26 581 aa7.59□□□□□ -1.2
CDK13-203ENST00000465643 PBX2P40425 430 aa7.59□□□□□ -1.2
CDK13-203ENST00000465643 POTEBQ6S5H4 581 aa7.59□□□□□ -1.2
CDK13-203ENST00000465643 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.2
CDK13-203ENST00000465643 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.2
CDK13-203ENST00000465643 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.59□□□□□ -1.2
CDK13-203ENST00000465643 APLP1P51693 650 aa7.58□□□□□ -1.2
CDK13-203ENST00000465643 Q3C1V9 767 aa7.58□□□□□ -1.2
CDK13-203ENST00000465643 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
CDK13-203ENST00000465643 FKBPLQ9UIM3 349 aa7.58□□□□□ -1.2
CDK13-203ENST00000465643 F12P00748 615 aaPredicted RBP7.57□□□□□ -1.2
CDK13-203ENST00000465643 BRICD5Q6PL45 260 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 PNMA1Q8ND90 353 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 TOP2AP11388 1531 aaKnown RBP7.57□□□□□ -1.2
CDK13-203ENST00000465643 ZBBXA8MT70 800 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 SCUBE3Q8IX30 993 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
CDK13-203ENST00000465643 BCAMP50895 628 aa7.56□□□□□ -1.2
CDK13-203ENST00000465643 THAP11Q96EK4 314 aa7.56□□□□□ -1.2
CDK13-203ENST00000465643 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 SKIP12755 728 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 RBM25P49756 843 aaKnown RBP7.55□□□□□ -1.2
CDK13-203ENST00000465643 USP17L2Q6R6M4 530 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 USP17L1Q7RTZ2 530 aa7.55□□□□□ -1.2
CDK13-203ENST00000465643 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
CDK13-203ENST00000465643 HPS5Q9UPZ3 1129 aa7.54□□□□□ -1.2
CDK13-203ENST00000465643 CTHP32929 405 aa7.54□□□□□ -1.2
CDK13-203ENST00000465643 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
CDK13-203ENST00000465643 USP17L5A8MUK1 530 aa7.53□□□□□ -1.2
CDK13-203ENST00000465643 TK2O00142 265 aa7.53□□□□□ -1.2
CDK13-203ENST00000465643 JUNDP17535 347 aa7.53□□□□□ -1.2
CDK13-203ENST00000465643 PPP4CP60510 307 aa7.53□□□□□ -1.2
CDK13-203ENST00000465643 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
CDK13-203ENST00000465643 PRDM9Q9NQV7 894 aa7.53□□□□□ -1.2
CDK13-203ENST00000465643 PATL2C9JE40 543 aaKnown RBP7.52□□□□□ -1.21
CDK13-203ENST00000465643 HRO43593 1189 aa7.52□□□□□ -1.21
CDK13-203ENST00000465643 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
CDK13-203ENST00000465643 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
CDK13-203ENST00000465643 SLAIN2Q9P270 581 aa7.52□□□□□ -1.21
CDK13-203ENST00000465643 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
CDK13-203ENST00000465643 PCDHB3Q9Y5E6 796 aa7.52□□□□□ -1.21
CDK13-203ENST00000465643 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDK13-203ENST00000465643 PHLDB3Q6NSJ2 640 aa7.52□□□□□ -1.21
CDK13-203ENST00000465643 PTPRNQ16849 979 aa7.51□□□□□ -1.21
CDK13-203ENST00000465643 SALL2Q9Y467 1007 aaPredicted RBP7.51□□□□□ -1.21
CDK13-203ENST00000465643 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
CDK13-203ENST00000465643 KCNH2Q12809 1159 aa7.51□□□□□ -1.21
CDK13-203ENST00000465643 FAM160A2Q8N612 972 aaPredicted RBP7.51□□□□□ -1.21
CDK13-203ENST00000465643 NCOA4Q13772 614 aa7.5□□□□□ -1.21
CDK13-203ENST00000465643 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
CDK13-203ENST00000465643 SND1Q7KZF4 910 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDK13-203ENST00000465643 CEP126Q9P2H0 1117 aa7.5□□□□□ -1.21
CDK13-203ENST00000465643 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
CDK13-203ENST00000465643 CCDC27Q2M243 656 aa7.49□□□□□ -1.21
CDK13-203ENST00000465643 ANKK1Q8NFD2 765 aa7.49□□□□□ -1.21
CDK13-203ENST00000465643 PRR14Q9BWN1 585 aa7.49□□□□□ -1.21
CDK13-203ENST00000465643 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
CDK13-203ENST00000465643 SCNN1AP37088 669 aa7.49□□□□□ -1.21
CDK13-203ENST00000465643 ELOAQ14241 798 aaKnown RBP7.49□□□□□ -1.21
CDK13-203ENST00000465643 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L21D6R901 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 NR1I2O75469 434 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 COPS2P61201 443 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 PCDHB9Q9Y5E1 797 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 EVA1BQ9NVM1 165 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 WBP1LQ9NX94 342 aa7.48□□□□□ -1.21
CDK13-203ENST00000465643 TSR3Q9UJK0 312 aaKnown RBP7.48□□□□□ -1.21
CDK13-203ENST00000465643 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
CDK13-203ENST00000465643 PLEKHM2Q8IWE5 1019 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms