RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ACTN4O43707 911 aaKnown RBP6.33□□□□□ -1.4
GPNMB-205ENST00000463011 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
GPNMB-205ENST00000463011 VARS2Q5ST30 1063 aaKnown RBP6.33□□□□□ -1.4
GPNMB-205ENST00000463011 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 BLOC1S3Q6QNY0 202 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L2Q6R6M4 530 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 LAPTM4BQ86VI4 370 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 DEPDC4Q8N2C3 294 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 FKBPLQ9UIM3 349 aa6.33□□□□□ -1.4
GPNMB-205ENST00000463011 NOVA2Q9UNW9 492 aaKnown RBP6.33□□□□□ -1.4
GPNMB-205ENST00000463011 GNEQ9Y223 722 aaKnown RBP6.33□□□□□ -1.4
GPNMB-205ENST00000463011 ERBB3P21860 1342 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 POTEB3A0JP26 581 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 POTEBQ6S5H4 581 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 RNF166Q96A37 237 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-205ENST00000463011 ZFRQ96KR1 1074 aaKnown RBP6.32□□□□□ -1.4
GPNMB-205ENST00000463011 USB1Q9BQ65 265 aaKnown RBP6.32□□□□□ -1.4
GPNMB-205ENST00000463011 NBPF3Q9H094 633 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 MYT1LQ9UL68 1186 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 AMOTL2Q9Y2J4 779 aa6.32□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L5A8MUK1 530 aa6.31□□□□□ -1.4
GPNMB-205ENST00000463011 NFATC2IPQ8NCF5 419 aa6.31□□□□□ -1.4
GPNMB-205ENST00000463011 FAM174AQ8TBP5 190 aa6.31□□□□□ -1.4
GPNMB-205ENST00000463011 CCER1Q8TC90 406 aaPredicted RBP6.31□□□□□ -1.4
GPNMB-205ENST00000463011 MAP10Q9P2G4 905 aa6.31□□□□□ -1.4
GPNMB-205ENST00000463011 MKRN1Q9UHC7 482 aaKnown RBP6.31□□□□□ -1.4
GPNMB-205ENST00000463011 CTHP32929 405 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 EMP3P54852 163 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 PHLDB3Q6NSJ2 640 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 BRICD5Q6PL45 260 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 TXNDC2Q86VQ3 553 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 LRCH3Q96II8 777 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 HS3ST6Q96QI5 342 aa6.3□□□□□ -1.4
GPNMB-205ENST00000463011 BHMG1C9JSJ3 638 aaPredicted RBP6.29□□□□□ -1.4
GPNMB-205ENST00000463011 F12P00748 615 aaPredicted RBP6.29□□□□□ -1.4
GPNMB-205ENST00000463011 RASA1P20936 1047 aa6.29□□□□□ -1.4
GPNMB-205ENST00000463011 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
GPNMB-205ENST00000463011 LARP1Q6PKG0 1096 aaKnown RBP6.29□□□□□ -1.4
GPNMB-205ENST00000463011 CEP126Q9P2H0 1117 aa6.29□□□□□ -1.4
GPNMB-205ENST00000463011 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L10C9JJH3 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L12C9JPN9 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L21D6R901 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 SSFA2P28290 1259 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
GPNMB-205ENST00000463011 PBX2P40425 430 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 SLFNL1Q499Z3 407 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 SCUBE3Q8IX30 993 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 FAM200AQ8TCP9 573 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.28□□□□□ -1.4
GPNMB-205ENST00000463011 SLAIN2Q9P270 581 aa6.28□□□□□ -1.4
GPNMB-205ENST00000463011 ZC3H4Q9UPT8 1303 aaKnown RBP6.27□□□□□ -1.41
GPNMB-205ENST00000463011 FMNL1O95466 1100 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-205ENST00000463011 JUNDP17535 347 aa6.27□□□□□ -1.41
GPNMB-205ENST00000463011 PTK7Q13308 1070 aa6.27□□□□□ -1.41
GPNMB-205ENST00000463011 NCOA4Q13772 614 aa6.27□□□□□ -1.41
GPNMB-205ENST00000463011 MRPL50Q8N5N7 158 aaKnown RBP6.27□□□□□ -1.41
GPNMB-205ENST00000463011 PRR14Q9BWN1 585 aa6.27□□□□□ -1.41
GPNMB-205ENST00000463011 SALL2Q9Y467 1007 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-205ENST00000463011 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
GPNMB-205ENST00000463011 FAM205CA6NFA0 338 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 IGSF3O75054 1194 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 PTK2Q05397 1052 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 FAM69CQ0P6D2 419 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 PTPRNQ16849 979 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 RNF135Q8IUD6 432 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 THAP11Q96EK4 314 aa6.26□□□□□ -1.41
GPNMB-205ENST00000463011 CDCA7Q9BWT1 371 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-205ENST00000463011 LOC105371045A0A1W2PR82 267 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 ATP5J2-PTCD1G3V325 749 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 APLP1P51693 650 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 PPP4CP60510 307 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 KCNH2Q12809 1159 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 PHTF2Q8N3S3 785 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 PLPP7Q8NBV4 271 aa6.25□□□□□ -1.41
GPNMB-205ENST00000463011 NR1I2O75469 434 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 DPYDQ12882 1025 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 TSGA10IPQ3SY00 556 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 PDXDC2PQ6P474 469 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 ZNF687Q8N1G0 1237 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 OGFOD1Q8N543 542 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 CLP1Q92989 425 aaKnown RBP6.24□□□□□ -1.41
GPNMB-205ENST00000463011 OCSTAMPQ9BR26 566 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 EVA1BQ9NVM1 165 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
GPNMB-205ENST00000463011 TK2O00142 265 aa6.23□□□□□ -1.41
GPNMB-205ENST00000463011 LZTS3O60299 673 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms