RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 TROQ12816 1431 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-206ENST00000461574 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
BRCA1-206ENST00000461574 CNTLNQ9NXG0 1405 aa8.33□□□□□ -1.08
BRCA1-206ENST00000461574 ABCC1P33527 1531 aa8.33□□□□□ -1.08
BRCA1-206ENST00000461574 MLH3Q9UHC1 1453 aa8.32□□□□□ -1.08
BRCA1-206ENST00000461574 GFRA3O60609 400 aa8.32□□□□□ -1.08
BRCA1-206ENST00000461574 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
BRCA1-206ENST00000461574 KIDINS220Q9ULH0 1771 aa8.32□□□□□ -1.08
BRCA1-206ENST00000461574 MYO3AQ8NEV4 1616 aa8.32□□□□□ -1.08
BRCA1-206ENST00000461574 CLTCQ00610 1675 aaKnown RBP8.31□□□□□ -1.08
BRCA1-206ENST00000461574 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
BRCA1-206ENST00000461574 LCE2BO14633 110 aa8.31□□□□□ -1.08
BRCA1-206ENST00000461574 UBTFP17480 764 aaKnown RBP8.31□□□□□ -1.08
BRCA1-206ENST00000461574 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
BRCA1-206ENST00000461574 CDC42BPAQ5VT25 1732 aa8.31□□□□□ -1.08
BRCA1-206ENST00000461574 ZNF142P52746 1687 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-206ENST00000461574 COPS2P61201 443 aa8.3□□□□□ -1.08
BRCA1-206ENST00000461574 LAPTM4AQ15012 233 aa8.3□□□□□ -1.08
BRCA1-206ENST00000461574 EYA1Q99502 592 aa8.3□□□□□ -1.08
BRCA1-206ENST00000461574 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
BRCA1-206ENST00000461574 NPATQ14207 1427 aa8.29□□□□□ -1.08
BRCA1-206ENST00000461574 SLF2Q8IX21 1173 aa8.29□□□□□ -1.08
BRCA1-206ENST00000461574 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
BRCA1-206ENST00000461574 ARHGAP35Q9NRY4 1499 aa8.29□□□□□ -1.08
BRCA1-206ENST00000461574 ZNF335Q9H4Z2 1342 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-206ENST00000461574 CEP170BQ9Y4F5 1589 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-206ENST00000461574 CCDC18Q5T9S5 1454 aa8.28□□□□□ -1.08
BRCA1-206ENST00000461574 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-206ENST00000461574 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
BRCA1-206ENST00000461574 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
BRCA1-206ENST00000461574 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
BRCA1-206ENST00000461574 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.09
BRCA1-206ENST00000461574 MED1Q15648 1581 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-206ENST00000461574 SAMD9LQ8IVG5 1584 aa8.27□□□□□ -1.09
BRCA1-206ENST00000461574 PLA2R1Q13018 1463 aa8.26□□□□□ -1.09
BRCA1-206ENST00000461574 POLR1AO95602 1720 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-206ENST00000461574 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
BRCA1-206ENST00000461574 ZNF777Q9ULD5 760 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-206ENST00000461574 ZMYM3Q14202 1370 aa8.25□□□□□ -1.09
BRCA1-206ENST00000461574 ATP7AQ04656 1500 aa8.25□□□□□ -1.09
BRCA1-206ENST00000461574 PTGDRQ13258 359 aa8.25□□□□□ -1.09
BRCA1-206ENST00000461574 SPAG9O60271 1321 aaKnown RBP8.25□□□□□ -1.09
BRCA1-206ENST00000461574 INO80Q9ULG1 1556 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-206ENST00000461574 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-206ENST00000461574 ZPR1O75312 459 aa8.24□□□□□ -1.09
BRCA1-206ENST00000461574 PIP4K2BP78356 416 aa8.24□□□□□ -1.09
BRCA1-206ENST00000461574 ADGBQ8N7X0 1667 aa8.24□□□□□ -1.09
BRCA1-206ENST00000461574 PLXNC1O60486 1568 aa8.23□□□□□ -1.09
BRCA1-206ENST00000461574 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
BRCA1-206ENST00000461574 TCOF1Q13428 1488 aaKnown RBP8.23□□□□□ -1.09
BRCA1-206ENST00000461574 CASKIN1Q8WXD9 1431 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 A2MP01023 1474 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 GGCXP38435 758 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 GGT6Q6P531 493 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 PCDHB3Q9Y5E6 796 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 CPS1P31327 1500 aa8.22□□□□□ -1.09
BRCA1-206ENST00000461574 DNMT1P26358 1616 aaKnown RBP8.21□□□□□ -1.09
BRCA1-206ENST00000461574 PTPRKQ15262 1439 aa8.21□□□□□ -1.09
BRCA1-206ENST00000461574 PLEKHH2Q8IVE3 1493 aa8.21□□□□□ -1.09
BRCA1-206ENST00000461574 TOM1O60784 492 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 DNAJB2P25686 324 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 HSPA1LP34931 641 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 FAM161AQ3B820 660 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 BLOC1S3Q6QNY0 202 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 ADGRG1Q9Y653 693 aa8.21□□□□□ -1.1
BRCA1-206ENST00000461574 A2ML1A8K2U0 1454 aa8.2□□□□□ -1.1
BRCA1-206ENST00000461574 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
BRCA1-206ENST00000461574 HNRNPMP52272 730 aaKnown RBP eCLIP8.2□□□□□ -1.1
BRCA1-206ENST00000461574 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
BRCA1-206ENST00000461574 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
BRCA1-206ENST00000461574 PRR14Q9BWN1 585 aa8.2□□□□□ -1.1
BRCA1-206ENST00000461574 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
BRCA1-206ENST00000461574 NUTM2FA1L443 756 aa8.19□□□□□ -1.1
BRCA1-206ENST00000461574 TMEM134Q9H6X4 195 aa8.19□□□□□ -1.1
BRCA1-206ENST00000461574 GPATCH8Q9UKJ3 1502 aaKnown RBP8.19□□□□□ -1.1
BRCA1-206ENST00000461574 RCCD1A6NED2 376 aa8.18□□□□□ -1.1
BRCA1-206ENST00000461574 TLL1O43897 1013 aa8.18□□□□□ -1.1
BRCA1-206ENST00000461574 CFDP1Q9UEE9 299 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-206ENST00000461574 CCNB3Q8WWL7 1395 aa8.18□□□□□ -1.1
BRCA1-206ENST00000461574 SHANK2Q9UPX8 1470 aa8.18□□□□□ -1.1
BRCA1-206ENST00000461574 NEURL4Q96JN8 1562 aa8.18□□□□□ -1.1
BRCA1-206ENST00000461574 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
BRCA1-206ENST00000461574 EMID1Q96A84 441 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-206ENST00000461574 KIAA1107Q9UPP5 1409 aa8.17□□□□□ -1.1
BRCA1-206ENST00000461574 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
BRCA1-206ENST00000461574 TNRQ92752 1358 aa8.16□□□□□ -1.1
BRCA1-206ENST00000461574 RNF17Q9BXT8 1623 aaKnown RBP8.16□□□□□ -1.1
BRCA1-206ENST00000461574 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
BRCA1-206ENST00000461574 SYNMO15061 1565 aa8.15□□□□□ -1.1
BRCA1-206ENST00000461574 MTUS2Q5JR59 1369 aa8.15□□□□□ -1.1
BRCA1-206ENST00000461574 SEMA3EO15041 775 aa8.15□□□□□ -1.1
BRCA1-206ENST00000461574 DEPDC5O75140 1603 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 UGGT1Q9NYU2 1555 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 PZPP20742 1482 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.14□□□□□ -1.11
BRCA1-206ENST00000461574 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
BRCA1-206ENST00000461574 CFHP08603 1231 aa8.14□□□□□ -1.11
BRCA1-206ENST00000461574 SLC10A3P09131 477 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms