RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
C9orf78-202ENST00000461349 CAMKK2Q96RR4 588 aa19.12■□□□□ 0.65
C9orf78-202ENST00000461349 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
C9orf78-202ENST00000461349 TRIM37O94972 964 aa19.11■□□□□ 0.65
C9orf78-202ENST00000461349 APBA3O96018 575 aa19.11■□□□□ 0.65
C9orf78-202ENST00000461349 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
C9orf78-202ENST00000461349 PPP1R1BQ9UD71 204 aaPredicted RBP19.11■□□□□ 0.65
C9orf78-202ENST00000461349 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
C9orf78-202ENST00000461349 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
C9orf78-202ENST00000461349 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
C9orf78-202ENST00000461349 NBPF14Q5TI25 921 aa19.09■□□□□ 0.65
C9orf78-202ENST00000461349 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
C9orf78-202ENST00000461349 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
C9orf78-202ENST00000461349 POGKQ9P215 609 aa19.06■□□□□ 0.64
C9orf78-202ENST00000461349 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
C9orf78-202ENST00000461349 C14orf93Q9H972 538 aaKnown RBP19.05■□□□□ 0.64
C9orf78-202ENST00000461349 SPON1Q9HCB6 807 aa19.05■□□□□ 0.64
C9orf78-202ENST00000461349 EIF3AQ14152 1382 aaKnown RBP19.05■□□□□ 0.64
C9orf78-202ENST00000461349 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
C9orf78-202ENST00000461349 PHRF1Q9P1Y6 1649 aaKnown RBP19.04■□□□□ 0.64
C9orf78-202ENST00000461349 DLC1Q96QB1 1528 aa19.04■□□□□ 0.64
C9orf78-202ENST00000461349 ACIN1Q9UKV3 1341 aaKnown RBP19.03■□□□□ 0.64
C9orf78-202ENST00000461349 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
C9orf78-202ENST00000461349 PAK3O75914 559 aaPredicted RBP19.03■□□□□ 0.64
C9orf78-202ENST00000461349 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
C9orf78-202ENST00000461349 CAMTA1Q9Y6Y1 1673 aa19.02■□□□□ 0.64
C9orf78-202ENST00000461349 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
C9orf78-202ENST00000461349 KCNQ2O43526 872 aa19.01■□□□□ 0.63
C9orf78-202ENST00000461349 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
C9orf78-202ENST00000461349 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
C9orf78-202ENST00000461349 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
C9orf78-202ENST00000461349 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
C9orf78-202ENST00000461349 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
C9orf78-202ENST00000461349 RGPD3A6NKT7 1758 aaPredicted RBP18.98■□□□□ 0.63
C9orf78-202ENST00000461349 RGPD4Q7Z3J3 1758 aa18.98■□□□□ 0.63
C9orf78-202ENST00000461349 CHRNA2Q15822 529 aa18.97■□□□□ 0.63
C9orf78-202ENST00000461349 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
C9orf78-202ENST00000461349 EVA1CP58658 441 aa18.96■□□□□ 0.63
C9orf78-202ENST00000461349 BARGINQ6ZT62 677 aa18.96■□□□□ 0.63
C9orf78-202ENST00000461349 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
C9orf78-202ENST00000461349 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
C9orf78-202ENST00000461349 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
C9orf78-202ENST00000461349 CHD4Q14839 1912 aa18.94■□□□□ 0.62
C9orf78-202ENST00000461349 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
C9orf78-202ENST00000461349 MPHOSPH9Q99550 1183 aa18.94■□□□□ 0.62
C9orf78-202ENST00000461349 ATP7BP35670 1465 aa18.94■□□□□ 0.62
C9orf78-202ENST00000461349 ZC3H6P61129 1189 aaKnown RBP18.93■□□□□ 0.62
C9orf78-202ENST00000461349 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
C9orf78-202ENST00000461349 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
C9orf78-202ENST00000461349 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
C9orf78-202ENST00000461349 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
C9orf78-202ENST00000461349 WASLO00401 505 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-202ENST00000461349 TRAK1Q9UPV9 953 aa18.91■□□□□ 0.62
C9orf78-202ENST00000461349 ADGRB1O14514 1584 aa18.9■□□□□ 0.62
C9orf78-202ENST00000461349 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
C9orf78-202ENST00000461349 MYOM1P52179 1685 aa18.89■□□□□ 0.61
C9orf78-202ENST00000461349 ZNF784Q8NCA9 323 aaPredicted RBP18.89■□□□□ 0.61
C9orf78-202ENST00000461349 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
C9orf78-202ENST00000461349 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
C9orf78-202ENST00000461349 THRAP3Q9Y2W1 955 aaKnown RBP18.88■□□□□ 0.61
C9orf78-202ENST00000461349 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
C9orf78-202ENST00000461349 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
C9orf78-202ENST00000461349 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
C9orf78-202ENST00000461349 LARP1Q6PKG0 1096 aaKnown RBP18.87■□□□□ 0.61
C9orf78-202ENST00000461349 PEAK1Q9H792 1746 aa18.87■□□□□ 0.61
C9orf78-202ENST00000461349 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
C9orf78-202ENST00000461349 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
C9orf78-202ENST00000461349 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
C9orf78-202ENST00000461349 PLSCR1O15162 318 aa18.84■□□□□ 0.61
C9orf78-202ENST00000461349 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
C9orf78-202ENST00000461349 LRRC37A3O60309 1634 aa18.83■□□□□ 0.61
C9orf78-202ENST00000461349 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
C9orf78-202ENST00000461349 CPDO75976 1380 aa18.82■□□□□ 0.6
C9orf78-202ENST00000461349 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
C9orf78-202ENST00000461349 UTRNP46939 3433 aa18.81■□□□□ 0.6
C9orf78-202ENST00000461349 BCL11BQ9C0K0 894 aaPredicted RBP18.81■□□□□ 0.6
C9orf78-202ENST00000461349 ANO8Q9HCE9 1232 aaPredicted RBP18.81■□□□□ 0.6
C9orf78-202ENST00000461349 COL5A2P05997 1499 aaPredicted RBP18.8■□□□□ 0.6
C9orf78-202ENST00000461349 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
C9orf78-202ENST00000461349 C1QTNF8P60827 252 aa18.8■□□□□ 0.6
C9orf78-202ENST00000461349 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
C9orf78-202ENST00000461349 CRB1P82279 1406 aa18.8■□□□□ 0.6
C9orf78-202ENST00000461349 POLR3AO14802 1390 aaPredicted RBP18.79■□□□□ 0.6
C9orf78-202ENST00000461349 ACEP12821 1306 aa18.77■□□□□ 0.6
C9orf78-202ENST00000461349 DDB1Q16531 1140 aa18.77■□□□□ 0.6
C9orf78-202ENST00000461349 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
C9orf78-202ENST00000461349 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
C9orf78-202ENST00000461349 PTGER2P43116 358 aa18.76■□□□□ 0.59
C9orf78-202ENST00000461349 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
C9orf78-202ENST00000461349 SYT17Q9BSW7 474 aa18.76■□□□□ 0.59
C9orf78-202ENST00000461349 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
C9orf78-202ENST00000461349 PDGFDQ9GZP0 370 aaPredicted RBP18.76■□□□□ 0.59
C9orf78-202ENST00000461349 STK32BQ9NY57 414 aa18.76■□□□□ 0.59
C9orf78-202ENST00000461349 USP19O94966 1318 aa18.75■□□□□ 0.59
C9orf78-202ENST00000461349 GCP02774 474 aa18.74■□□□□ 0.59
C9orf78-202ENST00000461349 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
C9orf78-202ENST00000461349 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
C9orf78-202ENST00000461349 CCDC61Q9Y6R9 512 aa18.74■□□□□ 0.59
C9orf78-202ENST00000461349 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
C9orf78-202ENST00000461349 DCAF11Q8TEB1 546 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms