RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
SNHG17-208ENST00000456953 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
SNHG17-208ENST00000456953 DLC1Q96QB1 1528 aa19.65■□□□□ 0.74
SNHG17-208ENST00000456953 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
SNHG17-208ENST00000456953 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
SNHG17-208ENST00000456953 POGKQ9P215 609 aa19.64■□□□□ 0.73
SNHG17-208ENST00000456953 EIF3AQ14152 1382 aaKnown RBP19.62■□□□□ 0.73
SNHG17-208ENST00000456953 ACIN1Q9UKV3 1341 aaKnown RBP19.62■□□□□ 0.73
SNHG17-208ENST00000456953 FAM196AQ6ZSG2 479 aa19.62■□□□□ 0.73
SNHG17-208ENST00000456953 TRIM37O94972 964 aa19.61■□□□□ 0.73
SNHG17-208ENST00000456953 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
SNHG17-208ENST00000456953 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
SNHG17-208ENST00000456953 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
SNHG17-208ENST00000456953 YY1P25490 414 aa19.6■□□□□ 0.73
SNHG17-208ENST00000456953 TULP4Q9NRJ4 1543 aa19.58■□□□□ 0.73
SNHG17-208ENST00000456953 APBA3O96018 575 aa19.58■□□□□ 0.72
SNHG17-208ENST00000456953 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
SNHG17-208ENST00000456953 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
SNHG17-208ENST00000456953 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
SNHG17-208ENST00000456953 NGDNQ8NEJ9 315 aaKnown RBP19.56■□□□□ 0.72
SNHG17-208ENST00000456953 KIAA0232Q92628 1395 aa19.56■□□□□ 0.72
SNHG17-208ENST00000456953 RREB1Q92766 1687 aa19.56■□□□□ 0.72
SNHG17-208ENST00000456953 ADGRB1O14514 1584 aa19.55■□□□□ 0.72
SNHG17-208ENST00000456953 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
SNHG17-208ENST00000456953 NBPF8Q3BBV2 869 aa19.54■□□□□ 0.72
SNHG17-208ENST00000456953 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
SNHG17-208ENST00000456953 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
SNHG17-208ENST00000456953 STRN4Q9NRL3 753 aa19.53■□□□□ 0.72
SNHG17-208ENST00000456953 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
SNHG17-208ENST00000456953 NUP188Q5SRE5 1749 aa19.53■□□□□ 0.72
SNHG17-208ENST00000456953 CHRNA2Q15822 529 aa19.52■□□□□ 0.72
SNHG17-208ENST00000456953 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
SNHG17-208ENST00000456953 BARGINQ6ZT62 677 aa19.51■□□□□ 0.71
SNHG17-208ENST00000456953 PHRF1Q9P1Y6 1649 aaKnown RBP19.51■□□□□ 0.71
SNHG17-208ENST00000456953 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
SNHG17-208ENST00000456953 ATP7BP35670 1465 aa19.49■□□□□ 0.71
SNHG17-208ENST00000456953 NINLQ9Y2I6 1382 aa19.49■□□□□ 0.71
SNHG17-208ENST00000456953 DCAF8L1A6NGE4 600 aa19.49■□□□□ 0.71
SNHG17-208ENST00000456953 USP35Q9P2H5 1018 aa19.49■□□□□ 0.71
SNHG17-208ENST00000456953 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
SNHG17-208ENST00000456953 SSH2Q76I76 1423 aa19.49■□□□□ 0.71
SNHG17-208ENST00000456953 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
SNHG17-208ENST00000456953 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
SNHG17-208ENST00000456953 EVA1CP58658 441 aa19.47■□□□□ 0.71
SNHG17-208ENST00000456953 UTRNP46939 3433 aa19.47■□□□□ 0.71
SNHG17-208ENST00000456953 KCNQ2O43526 872 aa19.46■□□□□ 0.71
SNHG17-208ENST00000456953 TCP11L2Q8N4U5 519 aa19.45■□□□□ 0.7
SNHG17-208ENST00000456953 NUDT16Q96DE0 195 aaKnown RBP19.44■□□□□ 0.7
SNHG17-208ENST00000456953 C11orf95C9JLR9 678 aaPredicted RBP19.43■□□□□ 0.7
SNHG17-208ENST00000456953 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
SNHG17-208ENST00000456953 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
SNHG17-208ENST00000456953 NUTM2GQ5VZR2 741 aa19.42■□□□□ 0.7
SNHG17-208ENST00000456953 THRAP3Q9Y2W1 955 aaKnown RBP19.42■□□□□ 0.7
SNHG17-208ENST00000456953 CPDO75976 1380 aa19.42■□□□□ 0.7
SNHG17-208ENST00000456953 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
SNHG17-208ENST00000456953 POLR3AO14802 1390 aaPredicted RBP19.41■□□□□ 0.7
SNHG17-208ENST00000456953 LMO7Q8WWI1 1683 aa19.4■□□□□ 0.7
SNHG17-208ENST00000456953 PARP4Q9UKK3 1724 aaKnown RBP19.39■□□□□ 0.7
SNHG17-208ENST00000456953 RGPD3A6NKT7 1758 aaPredicted RBP19.39■□□□□ 0.69
SNHG17-208ENST00000456953 RGPD4Q7Z3J3 1758 aa19.39■□□□□ 0.69
SNHG17-208ENST00000456953 ARHGEF28Q8N1W1 1705 aaKnown RBP19.38■□□□□ 0.69
SNHG17-208ENST00000456953 STAC3Q96MF2 364 aa19.38■□□□□ 0.69
SNHG17-208ENST00000456953 OVOS2A0A0G2JMS6 1433 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 OVOS2A0A0J9YW53 1432 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 OVOS2Q6IE36 1432 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 USP19O94966 1318 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 ACEP12821 1306 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 KDM2AQ9Y2K7 1162 aa19.37■□□□□ 0.69
SNHG17-208ENST00000456953 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
SNHG17-208ENST00000456953 PLSCR1O15162 318 aa19.36■□□□□ 0.69
SNHG17-208ENST00000456953 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
SNHG17-208ENST00000456953 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
SNHG17-208ENST00000456953 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
SNHG17-208ENST00000456953 PEAK1Q9H792 1746 aa19.35■□□□□ 0.69
SNHG17-208ENST00000456953 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
SNHG17-208ENST00000456953 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
SNHG17-208ENST00000456953 PLEKHG3A1L390 1219 aa19.34■□□□□ 0.69
SNHG17-208ENST00000456953 CASZ1Q86V15 1759 aa19.34■□□□□ 0.69
SNHG17-208ENST00000456953 CRB1P82279 1406 aa19.33■□□□□ 0.68
SNHG17-208ENST00000456953 GCP02774 474 aa19.32■□□□□ 0.68
SNHG17-208ENST00000456953 ANO8Q9HCE9 1232 aaPredicted RBP19.32■□□□□ 0.68
SNHG17-208ENST00000456953 NLRP13Q86W25 1043 aa19.31■□□□□ 0.68
SNHG17-208ENST00000456953 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
SNHG17-208ENST00000456953 ZNF784Q8NCA9 323 aaPredicted RBP19.3■□□□□ 0.68
SNHG17-208ENST00000456953 BCL11BQ9C0K0 894 aaPredicted RBP19.3■□□□□ 0.68
SNHG17-208ENST00000456953 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
SNHG17-208ENST00000456953 DDB1Q16531 1140 aa19.28■□□□□ 0.68
SNHG17-208ENST00000456953 ZBTB7AO95365 584 aa19.27■□□□□ 0.68
SNHG17-208ENST00000456953 PDGFDQ9GZP0 370 aaPredicted RBP19.27■□□□□ 0.68
SNHG17-208ENST00000456953 AATKQ6ZMQ8 1374 aa19.27■□□□□ 0.68
SNHG17-208ENST00000456953 MYOM1P52179 1685 aa19.27■□□□□ 0.67
SNHG17-208ENST00000456953 PTGER2P43116 358 aa19.26■□□□□ 0.67
SNHG17-208ENST00000456953 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
SNHG17-208ENST00000456953 BCL9O00512 1426 aa19.25■□□□□ 0.67
SNHG17-208ENST00000456953 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
SNHG17-208ENST00000456953 PTF1AQ7RTS3 328 aa19.25■□□□□ 0.67
SNHG17-208ENST00000456953 PROM2Q8N271 834 aa19.25■□□□□ 0.67
SNHG17-208ENST00000456953 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
SNHG17-208ENST00000456953 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
SNHG17-208ENST00000456953 CDCA7Q9BWT1 371 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms