RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 USP17L2Q6R6M4 530 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 USP17L1Q7RTZ2 530 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 PLEKHM2Q8IWE5 1019 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 PHTF2Q8N3S3 785 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 MAP10Q9P2G4 905 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 AMOTL2Q9Y2J4 779 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 LOC105371045A0A1W2PR82 267 aa7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 RNF40O75150 1001 aa7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 Q3C1V9 767 aa7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 NOM1Q5C9Z4 860 aaKnown RBP7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 DEPDC4Q8N2C3 294 aa7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 USB1Q9BQ65 265 aaKnown RBP7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
HMGN3P1-201ENST00000453847 UNCXA6NJT0 531 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L5A8MUK1 530 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 IGSF3O75054 1194 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 SKIP12755 728 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 SSFA2P28290 1259 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
HMGN3P1-201ENST00000453847 E9PSI1 815 aa7.06□□□□□ -1.28
HMGN3P1-201ENST00000453847 PTK7Q13308 1070 aa7.06□□□□□ -1.28
HMGN3P1-201ENST00000453847 TSGA10IPQ3SY00 556 aa7.06□□□□□ -1.28
HMGN3P1-201ENST00000453847 SCUBE3Q8IX30 993 aa7.06□□□□□ -1.28
HMGN3P1-201ENST00000453847 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
HMGN3P1-201ENST00000453847 ERBB3P21860 1342 aa7.05□□□□□ -1.28
HMGN3P1-201ENST00000453847 PBX2P40425 430 aa7.05□□□□□ -1.28
HMGN3P1-201ENST00000453847 APLP1P51693 650 aa7.05□□□□□ -1.28
HMGN3P1-201ENST00000453847 MKRN1Q9UHC7 482 aaKnown RBP7.05□□□□□ -1.28
HMGN3P1-201ENST00000453847 CHIC2Q9UKJ5 165 aa7.05□□□□□ -1.28
HMGN3P1-201ENST00000453847 POTEB3A0JP26 581 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L15C9J2P7 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L10C9JJH3 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L13C9JLJ4 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L12C9JPN9 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L11C9JVI0 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L21D6R901 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L18D6R9N7 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L22D6RA61 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L17D6RBQ6 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L19D6RCP7 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L20D6RJB6 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 JUNDP17535 347 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 SCNN1AP37088 669 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 USP17L24Q0WX57 530 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 POTEBQ6S5H4 581 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
HMGN3P1-201ENST00000453847 ZC3H4Q9UPT8 1303 aaKnown RBP7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 DKK1O94907 266 aa7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 NCOA4Q13772 614 aa7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 PTPRNQ16849 979 aa7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 FAM160A2Q8N612 972 aaPredicted RBP7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 NBPF3Q9H094 633 aa7.03□□□□□ -1.28
HMGN3P1-201ENST00000453847 KCNH2Q12809 1159 aa7.02□□□□□ -1.29
HMGN3P1-201ENST00000453847 CLP1Q92989 425 aaKnown RBP7.02□□□□□ -1.29
HMGN3P1-201ENST00000453847 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
HMGN3P1-201ENST00000453847 EVA1BQ9NVM1 165 aa7.02□□□□□ -1.29
HMGN3P1-201ENST00000453847 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.02□□□□□ -1.29
HMGN3P1-201ENST00000453847 TK2O00142 265 aa7.01□□□□□ -1.29
HMGN3P1-201ENST00000453847 HRO43593 1189 aa7.01□□□□□ -1.29
HMGN3P1-201ENST00000453847 TRAF7Q6Q0C0 670 aa7.01□□□□□ -1.29
HMGN3P1-201ENST00000453847 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
HMGN3P1-201ENST00000453847 CDCA7Q9BWT1 371 aaPredicted RBP7.01□□□□□ -1.29
HMGN3P1-201ENST00000453847 RBM47A0AV96 593 aaKnown RBP7□□□□□ -1.29
HMGN3P1-201ENST00000453847 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
HMGN3P1-201ENST00000453847 FMNL1O95466 1100 aaPredicted RBP7□□□□□ -1.29
HMGN3P1-201ENST00000453847 RASA1P20936 1047 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 ARID4AP29374 1257 aaPredicted RBP7□□□□□ -1.29
HMGN3P1-201ENST00000453847 CLDN10P78369 228 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 B4GALNT3Q6L9W6 998 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 PDXDC2PQ6P474 469 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 MRPL50Q8N5N7 158 aaKnown RBP7□□□□□ -1.29
HMGN3P1-201ENST00000453847 PLPP7Q8NBV4 271 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 IGSF5Q9NSI5 407 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 GPSM3Q9Y4H4 160 aa7□□□□□ -1.29
HMGN3P1-201ENST00000453847 SOWAHDA6NJG2 315 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 ST18O60284 1047 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 DXOO77932 396 aaKnown RBP6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 CTHP32929 405 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 RNF135Q8IUD6 432 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 ANKMY2Q8IV38 441 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 FAM200AQ8TCP9 573 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 MARVELD3Q96A59 401 aa6.99□□□□□ -1.29
HMGN3P1-201ENST00000453847 SOWAHBA6NEL2 793 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 SERPINB4P48594 390 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 BCAMP50895 628 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 MMP16P51512 607 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 PTK2Q05397 1052 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 DPYDQ12882 1025 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 SLFNL1Q499Z3 407 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 LARP1Q6PKG0 1096 aaKnown RBP6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 ADGRD1Q6QNK2 874 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 PRDM9Q9NQV7 894 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 KIAA1522Q9P206 1035 aaPredicted RBP6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
HMGN3P1-201ENST00000453847 PCDHB9Q9Y5E1 797 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms