RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 MRRFQ96E11 262 aaKnown RBP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 HIRIP3Q9BW71 556 aaPredicted RBP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 NUB1Q9Y5A7 615 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 FANCD2Q9BXW9 1451 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 CEP162Q5TB80 1403 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 IRX5P78411 483 aaPredicted RBP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 CSPP1Q1MSJ5 1256 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 ZKSCAN2Q63HK3 967 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 PDCD7Q8N8D1 485 aaKnown RBP6.22□□□□□ -1.41
EPHA3-202ENST00000452448 MICAL1Q8TDZ2 1067 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 CEP83Q9Y592 693 aa6.22□□□□□ -1.41
EPHA3-202ENST00000452448 CALRP27797 417 aaKnown RBP6.21□□□□□ -1.42
EPHA3-202ENST00000452448 LONRF3Q496Y0 759 aa6.21□□□□□ -1.42
EPHA3-202ENST00000452448 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
EPHA3-202ENST00000452448 MKL1Q969V6 931 aa6.21□□□□□ -1.42
EPHA3-202ENST00000452448 GTPBP4Q9BZE4 634 aaKnown RBP6.21□□□□□ -1.42
EPHA3-202ENST00000452448 IGF1RP08069 1367 aa6.21□□□□□ -1.42
EPHA3-202ENST00000452448 MAP4K4O95819 1239 aaPredicted RBP6.21□□□□□ -1.42
EPHA3-202ENST00000452448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.21□□□□□ -1.42
EPHA3-202ENST00000452448 C19orf67A6NJJ6 358 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 PAX3P23760 479 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 ZRSR2Q15696 482 aaKnown RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 CT47A1Q5JQC4 288 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 GPIHBP1Q8IV16 184 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 RBM28Q9NW13 759 aaKnown RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 CCDC88BA6NC98 1476 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 GOLGA6L3A6NEY3 463 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 MPHOSPH10O00566 681 aaKnown RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 ZSCAN20P17040 1043 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 SREK1Q8WXA9 508 aaKnown RBP6.2□□□□□ -1.42
EPHA3-202ENST00000452448 FRMD4BQ9Y2L6 1034 aa6.2□□□□□ -1.42
EPHA3-202ENST00000452448 RBM47A0AV96 593 aaKnown RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 HAX1O00165 279 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 CCDC184Q52MB2 194 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 ITFG2Q969R8 447 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 FEZ2Q9UHY8 353 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 COLQQ9Y215 455 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 GOLGA3Q08378 1498 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 WDR97A6NE52 1622 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 SKIV2LQ15477 1246 aaKnown RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 ZCRB1Q8TBF4 217 aaKnown RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 DCAF11Q8TEB1 546 aa6.19□□□□□ -1.42
EPHA3-202ENST00000452448 IPO9Q96P70 1041 aaKnown RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 CCDC94Q9BW85 323 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 RYDENQ9NUL5 291 aaKnown RBP6.19□□□□□ -1.42
EPHA3-202ENST00000452448 TDO2P48775 406 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 PRIM1P49642 420 aaKnown RBP6.18□□□□□ -1.42
EPHA3-202ENST00000452448 MLECQ14165 292 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 RPGRIP1LQ68CZ1 1315 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 FRAT1Q92837 279 aaPredicted RBP6.18□□□□□ -1.42
EPHA3-202ENST00000452448 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
EPHA3-202ENST00000452448 RAB11FIP3O75154 756 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 FECHP22830 423 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 SMYD5Q6GMV2 418 aa6.18□□□□□ -1.42
EPHA3-202ENST00000452448 UPF1Q92900 1129 aaKnown RBP eCLIP6.18□□□□□ -1.42
EPHA3-202ENST00000452448 SOCS7O14512 581 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 CCDC172P0C7W6 258 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 GOLGA2Q08379 1002 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 PPP1R15AO75807 674 aaPredicted RBP6.17□□□□□ -1.42
EPHA3-202ENST00000452448 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 MAMSTRQ6ZN01 415 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 PAIP2Q9BPZ3 127 aaKnown RBP6.17□□□□□ -1.42
EPHA3-202ENST00000452448 SMC3Q9UQE7 1217 aa6.17□□□□□ -1.42
EPHA3-202ENST00000452448 CFTRP13569 1480 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 SH3BP5O60239 455 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 WDR78Q5VTH9 848 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 MICALL2Q8IY33 904 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 MYCBPQ99417 103 aaPredicted RBP6.16□□□□□ -1.42
EPHA3-202ENST00000452448 POTEFA5A3E0 1075 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 C2orf72A6NCS6 295 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 TCF3P15923 654 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 CCT2P78371 535 aaKnown RBP6.16□□□□□ -1.42
EPHA3-202ENST00000452448 NEXNQ0ZGT2 675 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
EPHA3-202ENST00000452448 MTERF4Q7Z6M4 381 aaKnown RBP6.16□□□□□ -1.42
EPHA3-202ENST00000452448 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
EPHA3-202ENST00000452448 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
EPHA3-202ENST00000452448 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
EPHA3-202ENST00000452448 ACRBPQ8NEB7 543 aa6.15□□□□□ -1.42
EPHA3-202ENST00000452448 FAM13BQ9NYF5 915 aa6.15□□□□□ -1.42
EPHA3-202ENST00000452448 SYNJ1O43426 1573 aa6.15□□□□□ -1.43
EPHA3-202ENST00000452448 UVSSAQ2YD98 709 aa6.15□□□□□ -1.43
EPHA3-202ENST00000452448 PPP1R15BQ5SWA1 713 aa6.15□□□□□ -1.43
EPHA3-202ENST00000452448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.15□□□□□ -1.43
EPHA3-202ENST00000452448 HELBQ8NG08 1087 aaPredicted RBP6.15□□□□□ -1.43
EPHA3-202ENST00000452448 TMC1Q8TDI8 760 aa6.15□□□□□ -1.43
EPHA3-202ENST00000452448 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.43
EPHA3-202ENST00000452448 ZNF330Q9Y3S2 320 aaPredicted RBP6.15□□□□□ -1.43
EPHA3-202ENST00000452448 SOGA1O94964 1423 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 URB2Q14146 1524 aaKnown RBP6.14□□□□□ -1.43
EPHA3-202ENST00000452448 CAPN2P17655 700 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 PARP9Q8IXQ6 854 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 VTI1AQ96AJ9 217 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 CLASP1Q7Z460 1538 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 KIF21BO75037 1637 aa6.14□□□□□ -1.43
EPHA3-202ENST00000452448 CREB3O43889 395 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms