RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 ZFRQ96KR1 1074 aaKnown RBP10.45□□□□□ -0.74
COL11A1-205ENST00000447608 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
COL11A1-205ENST00000447608 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
COL11A1-205ENST00000447608 PLEKHM2Q8IWE5 1019 aa10.44□□□□□ -0.74
COL11A1-205ENST00000447608 FAM174AQ8TBP5 190 aa10.44□□□□□ -0.74
COL11A1-205ENST00000447608 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
COL11A1-205ENST00000447608 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
COL11A1-205ENST00000447608 TXNDC2Q86VQ3 553 aa10.43□□□□□ -0.74
COL11A1-205ENST00000447608 CCER1Q8TC90 406 aaPredicted RBP10.43□□□□□ -0.74
COL11A1-205ENST00000447608 NBPF3Q9H094 633 aa10.43□□□□□ -0.74
COL11A1-205ENST00000447608 MAP10Q9P2G4 905 aa10.43□□□□□ -0.74
COL11A1-205ENST00000447608 ERBB3P21860 1342 aa10.42□□□□□ -0.74
COL11A1-205ENST00000447608 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-205ENST00000447608 CRTC2Q53ET0 693 aaPredicted RBP10.41□□□□□ -0.74
COL11A1-205ENST00000447608 BRICD5Q6PL45 260 aa10.41□□□□□ -0.74
COL11A1-205ENST00000447608 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
COL11A1-205ENST00000447608 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L15C9J2P7 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L12C9JPN9 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L11C9JVI0 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L21D6R901 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L18D6R9N7 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L22D6RA61 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L19D6RCP7 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L20D6RJB6 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 USP17L24Q0WX57 530 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
COL11A1-205ENST00000447608 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
COL11A1-205ENST00000447608 LRCH3Q96II8 777 aa10.39□□□□□ -0.75
COL11A1-205ENST00000447608 SLAIN2Q9P270 581 aa10.39□□□□□ -0.75
COL11A1-205ENST00000447608 CEP126Q9P2H0 1117 aa10.39□□□□□ -0.75
COL11A1-205ENST00000447608 IGSF3O75054 1194 aa10.38□□□□□ -0.75
COL11A1-205ENST00000447608 SSFA2P28290 1259 aa10.38□□□□□ -0.75
COL11A1-205ENST00000447608 CTHP32929 405 aa10.38□□□□□ -0.75
COL11A1-205ENST00000447608 PBX2P40425 430 aa10.38□□□□□ -0.75
COL11A1-205ENST00000447608 LARP1Q6PKG0 1096 aaKnown RBP10.38□□□□□ -0.75
COL11A1-205ENST00000447608 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-205ENST00000447608 JUNDP17535 347 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 RASA1P20936 1047 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-205ENST00000447608 PTK7Q13308 1070 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 NCOA4Q13772 614 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 PTPRNQ16849 979 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 SLFNL1Q499Z3 407 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 FAM200AQ8TCP9 573 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 PRR14Q9BWN1 585 aa10.37□□□□□ -0.75
COL11A1-205ENST00000447608 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-205ENST00000447608 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
COL11A1-205ENST00000447608 FAM69CQ0P6D2 419 aa10.36□□□□□ -0.75
COL11A1-205ENST00000447608 SCUBE3Q8IX30 993 aa10.36□□□□□ -0.75
COL11A1-205ENST00000447608 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
COL11A1-205ENST00000447608 THAP11Q96EK4 314 aa10.36□□□□□ -0.75
COL11A1-205ENST00000447608 LOC105371045A0A1W2PR82 267 aa10.35□□□□□ -0.75
COL11A1-205ENST00000447608 UNCXA6NJT0 531 aa10.35□□□□□ -0.75
COL11A1-205ENST00000447608 RNF135Q8IUD6 432 aa10.35□□□□□ -0.75
COL11A1-205ENST00000447608 PHTF2Q8N3S3 785 aa10.35□□□□□ -0.75
COL11A1-205ENST00000447608 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
COL11A1-205ENST00000447608 PTK2Q05397 1052 aa10.34□□□□□ -0.75
COL11A1-205ENST00000447608 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
COL11A1-205ENST00000447608 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
COL11A1-205ENST00000447608 KCNH2Q12809 1159 aa10.33□□□□□ -0.76
COL11A1-205ENST00000447608 ANKMY2Q8IV38 441 aa10.33□□□□□ -0.76
COL11A1-205ENST00000447608 PLPP7Q8NBV4 271 aa10.33□□□□□ -0.76
COL11A1-205ENST00000447608 CLP1Q92989 425 aaKnown RBP10.33□□□□□ -0.76
COL11A1-205ENST00000447608 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
COL11A1-205ENST00000447608 APLP1P51693 650 aa10.32□□□□□ -0.76
COL11A1-205ENST00000447608 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
COL11A1-205ENST00000447608 GPSM3Q9Y4H4 160 aa10.32□□□□□ -0.76
COL11A1-205ENST00000447608 RBM47A0AV96 593 aaKnown RBP10.31□□□□□ -0.76
COL11A1-205ENST00000447608 NR1I2O75469 434 aa10.31□□□□□ -0.76
COL11A1-205ENST00000447608 ATP2B4P23634 1241 aa10.31□□□□□ -0.76
COL11A1-205ENST00000447608 PPP4CP60510 307 aa10.31□□□□□ -0.76
COL11A1-205ENST00000447608 ZNF687Q8N1G0 1237 aa10.31□□□□□ -0.76
COL11A1-205ENST00000447608 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
COL11A1-205ENST00000447608 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 TK2O00142 265 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 LZTS3O60299 673 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-205ENST00000447608 CCNYL3P0C7X3 344 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 SERPINB4P48594 390 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 MCCD1P59942 119 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-205ENST00000447608 DPYDQ12882 1025 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 DNAJC14Q6Y2X3 702 aaPredicted RBP10.3□□□□□ -0.76
COL11A1-205ENST00000447608 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 ARMC2Q8NEN0 867 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
COL11A1-205ENST00000447608 SCNN1AP37088 669 aa10.29□□□□□ -0.76
COL11A1-205ENST00000447608 EML3Q32P44 896 aa10.29□□□□□ -0.76
COL11A1-205ENST00000447608 CLDN10P78369 228 aa10.28□□□□□ -0.76
COL11A1-205ENST00000447608 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
COL11A1-205ENST00000447608 GPKOWQ92917 476 aaPredicted RBP eCLIP10.28□□□□□ -0.76
COL11A1-205ENST00000447608 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
COL11A1-205ENST00000447608 CHIC2Q9UKJ5 165 aa10.28□□□□□ -0.76
COL11A1-205ENST00000447608 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
COL11A1-205ENST00000447608 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
COL11A1-205ENST00000447608 MAP7D1Q3KQU3 841 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms