RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
COL11A1-205ENST00000447608 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
COL11A1-205ENST00000447608 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
COL11A1-205ENST00000447608 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
COL11A1-205ENST00000447608 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
COL11A1-205ENST00000447608 ADRA2BP18089 450 aa18.08■□□□□ 0.48
COL11A1-205ENST00000447608 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
COL11A1-205ENST00000447608 FOXD1Q16676 465 aa17.77■□□□□ 0.44
COL11A1-205ENST00000447608 KCNA4P22459 653 aa17.76■□□□□ 0.43
COL11A1-205ENST00000447608 EHMT2Q96KQ7 1210 aa17.67■□□□□ 0.42
COL11A1-205ENST00000447608 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
COL11A1-205ENST00000447608 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
COL11A1-205ENST00000447608 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
COL11A1-205ENST00000447608 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
COL11A1-205ENST00000447608 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
COL11A1-205ENST00000447608 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
COL11A1-205ENST00000447608 ZBTB22O15209 634 aa16.38■□□□□ 0.21
COL11A1-205ENST00000447608 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
COL11A1-205ENST00000447608 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
COL11A1-205ENST00000447608 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
COL11A1-205ENST00000447608 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
COL11A1-205ENST00000447608 MSH5O43196 834 aa15.96■□□□□ 0.15
COL11A1-205ENST00000447608 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
COL11A1-205ENST00000447608 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
COL11A1-205ENST00000447608 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
COL11A1-205ENST00000447608 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
COL11A1-205ENST00000447608 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
COL11A1-205ENST00000447608 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
COL11A1-205ENST00000447608 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
COL11A1-205ENST00000447608 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
COL11A1-205ENST00000447608 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
COL11A1-205ENST00000447608 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
COL11A1-205ENST00000447608 FKBP8Q14318 412 aa15.32■□□□□ 0.04
COL11A1-205ENST00000447608 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-205ENST00000447608 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
COL11A1-205ENST00000447608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL11A1-205ENST00000447608 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
COL11A1-205ENST00000447608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
COL11A1-205ENST00000447608 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
COL11A1-205ENST00000447608 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
COL11A1-205ENST00000447608 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
COL11A1-205ENST00000447608 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
COL11A1-205ENST00000447608 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
COL11A1-205ENST00000447608 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
COL11A1-205ENST00000447608 APLP2Q06481 763 aa14.35□□□□□ -0.11
COL11A1-205ENST00000447608 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
COL11A1-205ENST00000447608 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
COL11A1-205ENST00000447608 PROM2Q8N271 834 aa14.28□□□□□ -0.12
COL11A1-205ENST00000447608 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
COL11A1-205ENST00000447608 IFNLR1Q8IU57 520 aaPredicted RBP14.19□□□□□ -0.14
COL11A1-205ENST00000447608 FBLN2P98095 1184 aa14.17□□□□□ -0.14
COL11A1-205ENST00000447608 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
COL11A1-205ENST00000447608 HAP1P54257 671 aaPredicted RBP14.14□□□□□ -0.15
COL11A1-205ENST00000447608 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
COL11A1-205ENST00000447608 PKD2Q13563 968 aa14.06□□□□□ -0.16
COL11A1-205ENST00000447608 POLA2Q14181 598 aa14.06□□□□□ -0.16
COL11A1-205ENST00000447608 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
COL11A1-205ENST00000447608 BCANQ96GW7 911 aa13.93□□□□□ -0.18
COL11A1-205ENST00000447608 CAPN15O75808 1086 aa13.92□□□□□ -0.18
COL11A1-205ENST00000447608 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
COL11A1-205ENST00000447608 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-205ENST00000447608 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
COL11A1-205ENST00000447608 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
COL11A1-205ENST00000447608 BBXQ8WY36 941 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-205ENST00000447608 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
COL11A1-205ENST00000447608 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
COL11A1-205ENST00000447608 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
COL11A1-205ENST00000447608 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
COL11A1-205ENST00000447608 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
COL11A1-205ENST00000447608 ABCB7O75027 752 aa13.77□□□□□ -0.21
COL11A1-205ENST00000447608 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL11A1-205ENST00000447608 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
COL11A1-205ENST00000447608 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
COL11A1-205ENST00000447608 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
COL11A1-205ENST00000447608 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
COL11A1-205ENST00000447608 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-205ENST00000447608 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
COL11A1-205ENST00000447608 RGL2O15211 777 aa13.65□□□□□ -0.22
COL11A1-205ENST00000447608 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
COL11A1-205ENST00000447608 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
COL11A1-205ENST00000447608 MIER1Q8N108 512 aa13.58□□□□□ -0.24
COL11A1-205ENST00000447608 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
COL11A1-205ENST00000447608 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
COL11A1-205ENST00000447608 TSHZ2Q9NRE2 1034 aa13.55□□□□□ -0.24
COL11A1-205ENST00000447608 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
COL11A1-205ENST00000447608 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
COL11A1-205ENST00000447608 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
COL11A1-205ENST00000447608 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
COL11A1-205ENST00000447608 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL11A1-205ENST00000447608 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
COL11A1-205ENST00000447608 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
COL11A1-205ENST00000447608 DSG3P32926 999 aa13.46□□□□□ -0.25
COL11A1-205ENST00000447608 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
COL11A1-205ENST00000447608 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-205ENST00000447608 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
COL11A1-205ENST00000447608 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
COL11A1-205ENST00000447608 DNAJC5Q9H3Z4 198 aa13.3□□□□□ -0.28
COL11A1-205ENST00000447608 NBR1Q14596 966 aa13.26□□□□□ -0.29
COL11A1-205ENST00000447608 RNF25Q96BH1 459 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-205ENST00000447608 GSE1Q14687 1217 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms