RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 NBPF8Q3BBV2 869 aa10.66□□□□□ -0.7
LRRC28-203ENST00000447360 NBPF14Q5TI25 921 aa10.66□□□□□ -0.7
LRRC28-203ENST00000447360 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
LRRC28-203ENST00000447360 C14orf93Q9H972 538 aaKnown RBP10.65□□□□□ -0.7
LRRC28-203ENST00000447360 SPON1Q9HCB6 807 aa10.65□□□□□ -0.7
LRRC28-203ENST00000447360 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
LRRC28-203ENST00000447360 SPATA31E1Q6ZUB1 1445 aa10.65□□□□□ -0.7
LRRC28-203ENST00000447360 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.7
LRRC28-203ENST00000447360 ADGRB2O60241 1585 aa10.65□□□□□ -0.71
LRRC28-203ENST00000447360 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.71
LRRC28-203ENST00000447360 NINLQ9Y2I6 1382 aa10.65□□□□□ -0.71
LRRC28-203ENST00000447360 KNDC1Q76NI1 1749 aa10.64□□□□□ -0.71
LRRC28-203ENST00000447360 NRAPQ86VF7 1730 aa10.64□□□□□ -0.71
LRRC28-203ENST00000447360 SPATA31A1Q5TZJ5 1347 aa10.64□□□□□ -0.71
LRRC28-203ENST00000447360 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-203ENST00000447360 PRDM11Q9NQV5 511 aa10.64□□□□□ -0.71
LRRC28-203ENST00000447360 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
LRRC28-203ENST00000447360 DHX57Q6P158 1386 aaKnown RBP10.64□□□□□ -0.71
LRRC28-203ENST00000447360 THSD7AQ9UPZ6 1657 aa10.63□□□□□ -0.71
LRRC28-203ENST00000447360 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
LRRC28-203ENST00000447360 KCNQ2O43526 872 aa10.63□□□□□ -0.71
LRRC28-203ENST00000447360 PRAM1Q96QH2 718 aa10.63□□□□□ -0.71
LRRC28-203ENST00000447360 ABCA3Q99758 1704 aa10.63□□□□□ -0.71
LRRC28-203ENST00000447360 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
LRRC28-203ENST00000447360 TNS1Q9HBL0 1735 aaKnown RBP10.62□□□□□ -0.71
LRRC28-203ENST00000447360 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
LRRC28-203ENST00000447360 PDE3BQ13370 1112 aa10.62□□□□□ -0.71
LRRC28-203ENST00000447360 SAFB2Q14151 953 aaKnown RBP eCLIP10.61□□□□□ -0.71
LRRC28-203ENST00000447360 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
LRRC28-203ENST00000447360 POGKQ9P215 609 aa10.61□□□□□ -0.71
LRRC28-203ENST00000447360 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-203ENST00000447360 CFAP70Q5T0N1 1121 aa10.6□□□□□ -0.71
LRRC28-203ENST00000447360 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-203ENST00000447360 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
LRRC28-203ENST00000447360 PAK3O75914 559 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-203ENST00000447360 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
LRRC28-203ENST00000447360 KIAA0232Q92628 1395 aa10.59□□□□□ -0.71
LRRC28-203ENST00000447360 IFT172Q9UG01 1749 aa10.58□□□□□ -0.72
LRRC28-203ENST00000447360 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
LRRC28-203ENST00000447360 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-203ENST00000447360 NGDNQ8NEJ9 315 aaKnown RBP10.58□□□□□ -0.72
LRRC28-203ENST00000447360 TRPM3Q9HCF6 1732 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-203ENST00000447360 RGPD8O14715 1765 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-203ENST00000447360 ALS2Q96Q42 1657 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 EVA1CP58658 441 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 CHRNA2Q15822 529 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 THRAP3Q9Y2W1 955 aaKnown RBP10.57□□□□□ -0.72
LRRC28-203ENST00000447360 DLC1Q96QB1 1528 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 PRR36Q9H6K5 1346 aa10.57□□□□□ -0.72
LRRC28-203ENST00000447360 WASLO00401 505 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-203ENST00000447360 PLSCR1O15162 318 aa10.56□□□□□ -0.72
LRRC28-203ENST00000447360 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
LRRC28-203ENST00000447360 MPHOSPH9Q99550 1183 aa10.56□□□□□ -0.72
LRRC28-203ENST00000447360 HIRIP3Q9BW71 556 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-203ENST00000447360 RREB1Q92766 1687 aa10.56□□□□□ -0.72
LRRC28-203ENST00000447360 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
LRRC28-203ENST00000447360 ZC3H6P61129 1189 aaKnown RBP10.55□□□□□ -0.72
LRRC28-203ENST00000447360 IFFO2Q5TF58 517 aa10.55□□□□□ -0.72
LRRC28-203ENST00000447360 SSH2Q76I76 1423 aa10.55□□□□□ -0.72
LRRC28-203ENST00000447360 TULP4Q9NRJ4 1543 aa10.54□□□□□ -0.72
LRRC28-203ENST00000447360 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
LRRC28-203ENST00000447360 NUP188Q5SRE5 1749 aa10.54□□□□□ -0.72
LRRC28-203ENST00000447360 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
LRRC28-203ENST00000447360 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
LRRC28-203ENST00000447360 C1QTNF8P60827 252 aa10.53□□□□□ -0.72
LRRC28-203ENST00000447360 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
LRRC28-203ENST00000447360 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
LRRC28-203ENST00000447360 CPDO75976 1380 aa10.52□□□□□ -0.72
LRRC28-203ENST00000447360 PTGER2P43116 358 aa10.52□□□□□ -0.73
LRRC28-203ENST00000447360 ATP7BP35670 1465 aa10.52□□□□□ -0.73
LRRC28-203ENST00000447360 CRYBG1Q9Y4K1 1723 aa10.52□□□□□ -0.73
LRRC28-203ENST00000447360 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
LRRC28-203ENST00000447360 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-203ENST00000447360 OVOS2A0A0G2JMS6 1433 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 OVOS2A0A0J9YW53 1432 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 OVOS2Q6IE36 1432 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
LRRC28-203ENST00000447360 ZBTB7AO95365 584 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 NUTM2GQ5VZR2 741 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 SYT17Q9BSW7 474 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
LRRC28-203ENST00000447360 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 CAMTA1Q9Y6Y1 1673 aa10.5□□□□□ -0.73
LRRC28-203ENST00000447360 PROM2Q8N271 834 aa10.49□□□□□ -0.73
LRRC28-203ENST00000447360 PDGFDQ9GZP0 370 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-203ENST00000447360 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-203ENST00000447360 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
LRRC28-203ENST00000447360 FHDC1Q9C0D6 1143 aaPredicted RBP10.48□□□□□ -0.73
LRRC28-203ENST00000447360 USP19O94966 1318 aa10.48□□□□□ -0.73
LRRC28-203ENST00000447360 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
LRRC28-203ENST00000447360 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 GCP02774 474 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 DDB1Q16531 1140 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 MTFR1LQ9H019 292 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-203ENST00000447360 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 ACEP12821 1306 aa10.47□□□□□ -0.73
LRRC28-203ENST00000447360 BCL9O00512 1426 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms