RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
ABCF1-203ENST00000441867 ANKARQ7Z5J8 1434 aa13.77□□□□□ -0.21
ABCF1-203ENST00000441867 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
ABCF1-203ENST00000441867 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
ABCF1-203ENST00000441867 PPP1R1BQ9UD71 204 aaPredicted RBP13.77□□□□□ -0.21
ABCF1-203ENST00000441867 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
ABCF1-203ENST00000441867 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
ABCF1-203ENST00000441867 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
ABCF1-203ENST00000441867 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
ABCF1-203ENST00000441867 PRAM1Q96QH2 718 aa13.75□□□□□ -0.21
ABCF1-203ENST00000441867 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
ABCF1-203ENST00000441867 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
ABCF1-203ENST00000441867 KNDC1Q76NI1 1749 aa13.74□□□□□ -0.21
ABCF1-203ENST00000441867 POGKQ9P215 609 aa13.74□□□□□ -0.21
ABCF1-203ENST00000441867 EIF3AQ14152 1382 aaKnown RBP13.73□□□□□ -0.21
ABCF1-203ENST00000441867 PDE3BQ13370 1112 aa13.73□□□□□ -0.21
ABCF1-203ENST00000441867 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
ABCF1-203ENST00000441867 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
ABCF1-203ENST00000441867 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
ABCF1-203ENST00000441867 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
ABCF1-203ENST00000441867 KCNQ2O43526 872 aa13.72□□□□□ -0.21
ABCF1-203ENST00000441867 NRAPQ86VF7 1730 aa13.71□□□□□ -0.21
ABCF1-203ENST00000441867 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
ABCF1-203ENST00000441867 THSD7AQ9UPZ6 1657 aa13.7□□□□□ -0.22
ABCF1-203ENST00000441867 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-203ENST00000441867 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
ABCF1-203ENST00000441867 BARGINQ6ZT62 677 aa13.7□□□□□ -0.22
ABCF1-203ENST00000441867 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
ABCF1-203ENST00000441867 NGDNQ8NEJ9 315 aaKnown RBP13.7□□□□□ -0.22
ABCF1-203ENST00000441867 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
ABCF1-203ENST00000441867 TNS1Q9HBL0 1735 aaKnown RBP13.68□□□□□ -0.22
ABCF1-203ENST00000441867 EVA1CP58658 441 aa13.68□□□□□ -0.22
ABCF1-203ENST00000441867 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
ABCF1-203ENST00000441867 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
ABCF1-203ENST00000441867 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
ABCF1-203ENST00000441867 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
ABCF1-203ENST00000441867 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
ABCF1-203ENST00000441867 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
ABCF1-203ENST00000441867 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
ABCF1-203ENST00000441867 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
ABCF1-203ENST00000441867 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
ABCF1-203ENST00000441867 TCP11L2Q8N4U5 519 aa13.65□□□□□ -0.22
ABCF1-203ENST00000441867 HIRIP3Q9BW71 556 aaPredicted RBP13.65□□□□□ -0.22
ABCF1-203ENST00000441867 THRAP3Q9Y2W1 955 aaKnown RBP13.65□□□□□ -0.22
ABCF1-203ENST00000441867 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
ABCF1-203ENST00000441867 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
ABCF1-203ENST00000441867 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
ABCF1-203ENST00000441867 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
ABCF1-203ENST00000441867 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
ABCF1-203ENST00000441867 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
ABCF1-203ENST00000441867 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
ABCF1-203ENST00000441867 UTRNP46939 3433 aa13.63□□□□□ -0.23
ABCF1-203ENST00000441867 PLSCR1O15162 318 aa13.62□□□□□ -0.23
ABCF1-203ENST00000441867 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
ABCF1-203ENST00000441867 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
ABCF1-203ENST00000441867 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
ABCF1-203ENST00000441867 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
ABCF1-203ENST00000441867 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
ABCF1-203ENST00000441867 ATP7BP35670 1465 aa13.6□□□□□ -0.23
ABCF1-203ENST00000441867 RREB1Q92766 1687 aa13.59□□□□□ -0.23
ABCF1-203ENST00000441867 NUDT16Q96DE0 195 aaKnown RBP13.59□□□□□ -0.23
ABCF1-203ENST00000441867 CPDO75976 1380 aa13.58□□□□□ -0.23
ABCF1-203ENST00000441867 NUP188Q5SRE5 1749 aa13.58□□□□□ -0.24
ABCF1-203ENST00000441867 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
ABCF1-203ENST00000441867 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
ABCF1-203ENST00000441867 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
ABCF1-203ENST00000441867 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
ABCF1-203ENST00000441867 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
ABCF1-203ENST00000441867 GIGYF1O75420 1035 aaPredicted RBP13.56□□□□□ -0.24
ABCF1-203ENST00000441867 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
ABCF1-203ENST00000441867 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
ABCF1-203ENST00000441867 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
ABCF1-203ENST00000441867 ADGRB1O14514 1584 aa13.55□□□□□ -0.24
ABCF1-203ENST00000441867 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
ABCF1-203ENST00000441867 PTGER2P43116 358 aa13.55□□□□□ -0.24
ABCF1-203ENST00000441867 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
ABCF1-203ENST00000441867 CRYBG1Q9Y4K1 1723 aa13.55□□□□□ -0.24
ABCF1-203ENST00000441867 DDB1Q16531 1140 aa13.54□□□□□ -0.24
ABCF1-203ENST00000441867 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
ABCF1-203ENST00000441867 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
ABCF1-203ENST00000441867 STK32BQ9NY57 414 aa13.54□□□□□ -0.24
ABCF1-203ENST00000441867 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
ABCF1-203ENST00000441867 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
ABCF1-203ENST00000441867 SYT17Q9BSW7 474 aa13.53□□□□□ -0.24
ABCF1-203ENST00000441867 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
ABCF1-203ENST00000441867 USP19O94966 1318 aa13.53□□□□□ -0.24
ABCF1-203ENST00000441867 ACEP12821 1306 aa13.53□□□□□ -0.24
ABCF1-203ENST00000441867 GCP02774 474 aa13.52□□□□□ -0.25
ABCF1-203ENST00000441867 CDK19Q9BWU1 502 aa13.52□□□□□ -0.25
ABCF1-203ENST00000441867 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
ABCF1-203ENST00000441867 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
ABCF1-203ENST00000441867 MTFR1LQ9H019 292 aa13.52□□□□□ -0.25
ABCF1-203ENST00000441867 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
ABCF1-203ENST00000441867 CRB1P82279 1406 aa13.52□□□□□ -0.25
ABCF1-203ENST00000441867 CHD4Q14839 1912 aa13.51□□□□□ -0.25
ABCF1-203ENST00000441867 PROM2Q8N271 834 aa13.51□□□□□ -0.25
ABCF1-203ENST00000441867 BCL9O00512 1426 aa13.5□□□□□ -0.25
ABCF1-203ENST00000441867 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
ABCF1-203ENST00000441867 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
ABCF1-203ENST00000441867 NRKQ7Z2Y5 1582 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms