RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
EPHA4-208ENST00000441679 ATP10BO94823 1461 aa11.32□□□□□ -0.6
EPHA4-208ENST00000441679 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
EPHA4-208ENST00000441679 APBB1O00213 710 aa11.32□□□□□ -0.6
EPHA4-208ENST00000441679 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
EPHA4-208ENST00000441679 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
EPHA4-208ENST00000441679 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
EPHA4-208ENST00000441679 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
EPHA4-208ENST00000441679 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
EPHA4-208ENST00000441679 CFHP08603 1231 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
EPHA4-208ENST00000441679 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
EPHA4-208ENST00000441679 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
EPHA4-208ENST00000441679 AP1G2O75843 785 aa11.3□□□□□ -0.6
EPHA4-208ENST00000441679 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
EPHA4-208ENST00000441679 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 SOCS7O14512 581 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 HRCP23327 699 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 KMT5BQ4FZB7 885 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
EPHA4-208ENST00000441679 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
EPHA4-208ENST00000441679 LRRC9Q6ZRR7 1453 aa11.28□□□□□ -0.6
EPHA4-208ENST00000441679 LSM11P83369 360 aaKnown RBP eCLIP11.28□□□□□ -0.6
EPHA4-208ENST00000441679 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
EPHA4-208ENST00000441679 LRCH3Q96II8 777 aa11.28□□□□□ -0.6
EPHA4-208ENST00000441679 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
EPHA4-208ENST00000441679 PCF11O94913 1555 aaKnown RBP11.28□□□□□ -0.6
EPHA4-208ENST00000441679 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
EPHA4-208ENST00000441679 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.6
EPHA4-208ENST00000441679 GUCA2AQ02747 115 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 FUT2Q10981 343 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 MTMR2Q13614 643 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
EPHA4-208ENST00000441679 ADGRD1Q6QNK2 874 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 PCDHGC3Q9UN70 934 aa11.27□□□□□ -0.61
EPHA4-208ENST00000441679 ATP6V1AP38606 617 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
EPHA4-208ENST00000441679 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 ARID3AQ99856 593 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
EPHA4-208ENST00000441679 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
EPHA4-208ENST00000441679 HLA-CQ95604 372 aa11.25□□□□□ -0.61
EPHA4-208ENST00000441679 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.25□□□□□ -0.61
EPHA4-208ENST00000441679 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
EPHA4-208ENST00000441679 GOLGA8CPA6NN73 597 aa11.24□□□□□ -0.61
EPHA4-208ENST00000441679 FNBP4Q8N3X1 1017 aaPredicted RBP11.24□□□□□ -0.61
EPHA4-208ENST00000441679 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
EPHA4-208ENST00000441679 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
EPHA4-208ENST00000441679 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
EPHA4-208ENST00000441679 EFCAB2Q5VUJ9 269 aa11.23□□□□□ -0.61
EPHA4-208ENST00000441679 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
EPHA4-208ENST00000441679 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
EPHA4-208ENST00000441679 ASXL2Q76L83 1435 aa11.23□□□□□ -0.61
EPHA4-208ENST00000441679 EHBP1L1Q8N3D4 1523 aa11.23□□□□□ -0.61
EPHA4-208ENST00000441679 PHLDB1Q86UU1 1377 aa11.22□□□□□ -0.61
EPHA4-208ENST00000441679 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
EPHA4-208ENST00000441679 ADCY10Q96PN6 1610 aa11.22□□□□□ -0.61
EPHA4-208ENST00000441679 WDR7Q9Y4E6 1490 aa11.22□□□□□ -0.61
EPHA4-208ENST00000441679 TSC1Q92574 1164 aa11.21□□□□□ -0.61
EPHA4-208ENST00000441679 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
EPHA4-208ENST00000441679 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
EPHA4-208ENST00000441679 MIA2Q96PC5 1412 aa11.2□□□□□ -0.62
EPHA4-208ENST00000441679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.2□□□□□ -0.62
EPHA4-208ENST00000441679 HRO43593 1189 aa11.2□□□□□ -0.62
EPHA4-208ENST00000441679 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
EPHA4-208ENST00000441679 ZNF777Q9ULD5 760 aaPredicted RBP11.2□□□□□ -0.62
EPHA4-208ENST00000441679 SUPT6HQ7KZ85 1726 aaKnown RBP11.2□□□□□ -0.62
EPHA4-208ENST00000441679 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
EPHA4-208ENST00000441679 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
EPHA4-208ENST00000441679 FAM69CQ0P6D2 419 aa11.19□□□□□ -0.62
EPHA4-208ENST00000441679 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
EPHA4-208ENST00000441679 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
EPHA4-208ENST00000441679 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
EPHA4-208ENST00000441679 ABL2P42684 1182 aa11.18□□□□□ -0.62
EPHA4-208ENST00000441679 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
EPHA4-208ENST00000441679 CCDC82Q8N4S0 544 aa11.18□□□□□ -0.62
EPHA4-208ENST00000441679 KIF14Q15058 1648 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 TSPY4P0CV99 314 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 TSPY10P0CW01 314 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 Q3C1V9 767 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 NDUFB9Q9Y6M9 179 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 NCOA2Q15596 1464 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
EPHA4-208ENST00000441679 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 PPP4CP60510 307 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 CTDSPL2Q05D32 466 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 MORN1Q5T089 497 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 PLCH2O75038 1416 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 CD109Q6YHK3 1445 aa11.16□□□□□ -0.62
EPHA4-208ENST00000441679 PLEKHH2Q8IVE3 1493 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms