RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 VIRMAQ69YN4 1812 aaKnown RBP8.73□□□□□ -1.01
LINC00390-201ENST00000432331 LETM1O95202 739 aaPredicted RBP8.73□□□□□ -1.01
LINC00390-201ENST00000432331 BECN1Q14457 450 aa8.73□□□□□ -1.01
LINC00390-201ENST00000432331 NBPF1Q3BBV0 1214 aa8.73□□□□□ -1.01
LINC00390-201ENST00000432331 KLHL34Q8N239 644 aa8.73□□□□□ -1.01
LINC00390-201ENST00000432331 PRKRIP1Q9H875 184 aaPredicted RBP8.73□□□□□ -1.01
LINC00390-201ENST00000432331 MRS2Q9HD23 443 aa8.73□□□□□ -1.01
LINC00390-201ENST00000432331 SETD1AO15047 1707 aaKnown RBP8.73□□□□□ -1.01
LINC00390-201ENST00000432331 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
LINC00390-201ENST00000432331 YTHDC2Q9H6S0 1430 aaKnown RBP8.72□□□□□ -1.01
LINC00390-201ENST00000432331 PTMSP20962 102 aa8.72□□□□□ -1.01
LINC00390-201ENST00000432331 HSPA2P54652 639 aa8.72□□□□□ -1.01
LINC00390-201ENST00000432331 TEX2Q8IWB9 1127 aa8.72□□□□□ -1.01
LINC00390-201ENST00000432331 INSRP06213 1382 aa8.72□□□□□ -1.01
LINC00390-201ENST00000432331 LRPPRCP42704 1394 aaKnown RBP8.72□□□□□ -1.01
LINC00390-201ENST00000432331 KTN1Q86UP2 1357 aaKnown RBP8.72□□□□□ -1.01
LINC00390-201ENST00000432331 CPS1P31327 1500 aa8.71□□□□□ -1.01
LINC00390-201ENST00000432331 DLC1Q96QB1 1528 aa8.71□□□□□ -1.01
LINC00390-201ENST00000432331 RRP1P56182 461 aaKnown RBP8.71□□□□□ -1.02
LINC00390-201ENST00000432331 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 FAM161AQ3B820 660 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 FTSJ3Q8IY81 847 aaKnown RBP8.71□□□□□ -1.02
LINC00390-201ENST00000432331 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 TBX22Q9Y458 520 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 METP08581 1390 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 TECPR2O15040 1411 aa8.71□□□□□ -1.02
LINC00390-201ENST00000432331 DYNC1I1O14576 645 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 OFD1O75665 1012 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 HSPA5P11021 654 aaKnown RBP8.7□□□□□ -1.02
LINC00390-201ENST00000432331 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC00390-201ENST00000432331 HS1BP3Q53T59 392 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 PTCH1Q13635 1447 aa8.7□□□□□ -1.02
LINC00390-201ENST00000432331 KNDC1Q76NI1 1749 aa8.69□□□□□ -1.02
LINC00390-201ENST00000432331 SLC20A2Q08357 652 aa8.69□□□□□ -1.02
LINC00390-201ENST00000432331 ABCC11Q96J66 1382 aa8.69□□□□□ -1.02
LINC00390-201ENST00000432331 SBNO2Q9Y2G9 1366 aa8.69□□□□□ -1.02
LINC00390-201ENST00000432331 CHRM1P11229 460 aaPredicted RBP8.68□□□□□ -1.02
LINC00390-201ENST00000432331 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
LINC00390-201ENST00000432331 STK26Q9P289 416 aa8.68□□□□□ -1.02
LINC00390-201ENST00000432331 TRAK1Q9UPV9 953 aa8.68□□□□□ -1.02
LINC00390-201ENST00000432331 FAM135BQ49AJ0 1406 aa8.68□□□□□ -1.02
LINC00390-201ENST00000432331 NWD1Q149M9 1564 aa8.68□□□□□ -1.02
LINC00390-201ENST00000432331 XRN1Q8IZH2 1706 aaKnown RBP8.68□□□□□ -1.02
LINC00390-201ENST00000432331 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
LINC00390-201ENST00000432331 ST20-MTHFSA0A0A6YYL1 179 aa8.67□□□□□ -1.02
LINC00390-201ENST00000432331 NKTRP30414 1462 aaKnown RBP8.67□□□□□ -1.02
LINC00390-201ENST00000432331 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
LINC00390-201ENST00000432331 PPP4R3BQ5MIZ7 849 aa8.67□□□□□ -1.02
LINC00390-201ENST00000432331 CCDC7Q96M83 1385 aa8.67□□□□□ -1.02
LINC00390-201ENST00000432331 POGKQ9P215 609 aa8.67□□□□□ -1.02
LINC00390-201ENST00000432331 BCCIPQ9P287 314 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00390-201ENST00000432331 ZNF219Q9P2Y4 722 aaPredicted RBP8.67□□□□□ -1.02
LINC00390-201ENST00000432331 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
LINC00390-201ENST00000432331 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
LINC00390-201ENST00000432331 DSG3P32926 999 aa8.66□□□□□ -1.02
LINC00390-201ENST00000432331 CCDC173Q0VFZ6 552 aa8.66□□□□□ -1.02
LINC00390-201ENST00000432331 CENPQQ7L2Z9 268 aaPredicted RBP8.66□□□□□ -1.02
LINC00390-201ENST00000432331 CCDC94Q9BW85 323 aaPredicted RBP8.66□□□□□ -1.02
LINC00390-201ENST00000432331 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 ROBO2Q9HCK4 1378 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 ZSCAN30Q86W11 494 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 FAM9BQ8IZU0 186 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 PRAM1Q96QH2 718 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 CHMP4BQ9H444 224 aaKnown RBP8.65□□□□□ -1.02
LINC00390-201ENST00000432331 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
LINC00390-201ENST00000432331 AMOTL2Q9Y2J4 779 aa8.65□□□□□ -1.02
LINC00390-201ENST00000432331 STRCQ7RTU9 1775 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 CDK11BP21127 795 aaKnown RBP8.64□□□□□ -1.03
LINC00390-201ENST00000432331 MCM5P33992 734 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 TMF1P82094 1093 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 HOMEZQ8IX15 550 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 TESK2Q96S53 571 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
LINC00390-201ENST00000432331 GRPEL1Q9HAV7 217 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 ADGRB2O60241 1585 aa8.64□□□□□ -1.03
LINC00390-201ENST00000432331 IBTKQ9P2D0 1353 aaPredicted RBP8.63□□□□□ -1.03
LINC00390-201ENST00000432331 KCNA6P17658 529 aa8.63□□□□□ -1.03
LINC00390-201ENST00000432331 CDCA8Q53HL2 280 aa8.63□□□□□ -1.03
LINC00390-201ENST00000432331 TSPYL1Q9H0U9 437 aa8.63□□□□□ -1.03
LINC00390-201ENST00000432331 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
LINC00390-201ENST00000432331 TULP4Q9NRJ4 1543 aa8.63□□□□□ -1.03
LINC00390-201ENST00000432331 DISP3Q9P2K9 1392 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 PLEKHH1Q9ULM0 1364 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 EVC2Q86UK5 1308 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 ABCB7O75027 752 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 MSNP26038 577 aaKnown RBP8.62□□□□□ -1.03
LINC00390-201ENST00000432331 RIPK4P57078 832 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 SAFB2Q14151 953 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00390-201ENST00000432331 PAXIP1Q6ZW49 1069 aaPredicted RBP8.62□□□□□ -1.03
LINC00390-201ENST00000432331 PPP1R9BQ96SB3 815 aa8.62□□□□□ -1.03
LINC00390-201ENST00000432331 NINLQ9Y2I6 1382 aa8.61□□□□□ -1.03
LINC00390-201ENST00000432331 KIF7Q2M1P5 1343 aa8.61□□□□□ -1.03
LINC00390-201ENST00000432331 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
LINC00390-201ENST00000432331 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
LINC00390-201ENST00000432331 ZNF500O60304 480 aaPredicted RBP8.61□□□□□ -1.03
LINC00390-201ENST00000432331 SKOR2Q2VWA4 1001 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms