RNA–Protein interactions for RNA: ENST00000419781.5

CCNT2-204, Transcript of cyclin T2, humanhuman

TSL 1 (best)

Gene CCNT2, Length 5,414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT2-204ENST00000419781 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
CCNT2-204ENST00000419781 KIAA0556O60303 1618 aa18.35■□□□□ 0.53
CCNT2-204ENST00000419781 NLRP6P59044 892 aa18.35■□□□□ 0.53
CCNT2-204ENST00000419781 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
CCNT2-204ENST00000419781 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
CCNT2-204ENST00000419781 AAMPQ13685 434 aa18.34■□□□□ 0.53
CCNT2-204ENST00000419781 ATP10BO94823 1461 aa18.34■□□□□ 0.53
CCNT2-204ENST00000419781 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
CCNT2-204ENST00000419781 CCDC73Q6ZRK6 1079 aa18.34■□□□□ 0.53
CCNT2-204ENST00000419781 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
CCNT2-204ENST00000419781 INTS3Q68E01 1043 aaKnown RBP18.33■□□□□ 0.53
CCNT2-204ENST00000419781 GNL3LQ9NVN8 582 aaKnown RBP18.33■□□□□ 0.52
CCNT2-204ENST00000419781 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
CCNT2-204ENST00000419781 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
CCNT2-204ENST00000419781 APAF1O14727 1248 aa18.32■□□□□ 0.52
CCNT2-204ENST00000419781 EPS15P42566 896 aa18.32■□□□□ 0.52
CCNT2-204ENST00000419781 OFD1O75665 1012 aa18.32■□□□□ 0.52
CCNT2-204ENST00000419781 UBTFL1P0CB47 393 aaPredicted RBP18.31■□□□□ 0.52
CCNT2-204ENST00000419781 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
CCNT2-204ENST00000419781 CCDC173Q0VFZ6 552 aa18.31■□□□□ 0.52
CCNT2-204ENST00000419781 TMEM132AQ24JP5 1023 aa18.31■□□□□ 0.52
CCNT2-204ENST00000419781 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
CCNT2-204ENST00000419781 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
CCNT2-204ENST00000419781 RPGRIP1LQ68CZ1 1315 aa18.3■□□□□ 0.52
CCNT2-204ENST00000419781 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
CCNT2-204ENST00000419781 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
CCNT2-204ENST00000419781 FYB1O15117 783 aa18.3■□□□□ 0.52
CCNT2-204ENST00000419781 PSMA5P28066 241 aa18.3■□□□□ 0.52
CCNT2-204ENST00000419781 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
CCNT2-204ENST00000419781 PAF1Q8N7H5 531 aa18.3■□□□□ 0.52
CCNT2-204ENST00000419781 CABP2Q9NPB3 220 aa18.29■□□□□ 0.52
CCNT2-204ENST00000419781 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
CCNT2-204ENST00000419781 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
CCNT2-204ENST00000419781 SASS6Q6UVJ0 657 aa18.28■□□□□ 0.52
CCNT2-204ENST00000419781 GNAI3P08754 354 aa18.28■□□□□ 0.52
CCNT2-204ENST00000419781 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
CCNT2-204ENST00000419781 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CCNT2-204ENST00000419781 THEMISQ8N1K5 641 aaPredicted RBP18.28■□□□□ 0.52
CCNT2-204ENST00000419781 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
CCNT2-204ENST00000419781 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
CCNT2-204ENST00000419781 FANCAO15360 1455 aa18.27■□□□□ 0.52
CCNT2-204ENST00000419781 VPS37CA5D8V6 355 aaPredicted RBP18.27■□□□□ 0.52
CCNT2-204ENST00000419781 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
CCNT2-204ENST00000419781 HIP1O00291 1037 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
CCNT2-204ENST00000419781 ESCO1Q5FWF5 840 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 CLASRPQ8N2M8 674 aaKnown RBP18.26■□□□□ 0.51
CCNT2-204ENST00000419781 ZFYVE27Q5T4F4 411 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 ABTB2Q8N961 1025 aa18.26■□□□□ 0.51
CCNT2-204ENST00000419781 NUCB2P80303 420 aa18.25■□□□□ 0.51
CCNT2-204ENST00000419781 FOXD4L6Q3SYB3 417 aaPredicted RBP18.25■□□□□ 0.51
CCNT2-204ENST00000419781 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
CCNT2-204ENST00000419781 FOXD4L3Q6VB84 417 aaPredicted RBP18.25■□□□□ 0.51
CCNT2-204ENST00000419781 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
CCNT2-204ENST00000419781 PLIN1O60240 522 aa18.25■□□□□ 0.51
CCNT2-204ENST00000419781 RRP1P56182 461 aaKnown RBP18.25■□□□□ 0.51
CCNT2-204ENST00000419781 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
CCNT2-204ENST00000419781 PTPRKQ15262 1439 aa18.25■□□□□ 0.51
CCNT2-204ENST00000419781 RUFY1Q96T51 708 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 NAT10Q9H0A0 1025 aaKnown RBP18.24■□□□□ 0.51
CCNT2-204ENST00000419781 PPP1R1BQ9UD71 204 aaPredicted RBP18.24■□□□□ 0.51
CCNT2-204ENST00000419781 ACBD3Q9H3P7 528 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 TXLNAP40222 546 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 CDK5RAP3Q96JB5 506 aa18.24■□□□□ 0.51
CCNT2-204ENST00000419781 AK7Q96M32 723 aa18.23■□□□□ 0.51
CCNT2-204ENST00000419781 NUP160Q12769 1436 aa18.23■□□□□ 0.51
CCNT2-204ENST00000419781 RPRD2Q5VT52 1461 aaKnown RBP18.23■□□□□ 0.51
CCNT2-204ENST00000419781 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
CCNT2-204ENST00000419781 HSP90AB2PQ58FF8 381 aa18.22■□□□□ 0.51
CCNT2-204ENST00000419781 FSD1Q9BTV5 496 aa18.22■□□□□ 0.51
CCNT2-204ENST00000419781 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
CCNT2-204ENST00000419781 PNISRQ8TF01 805 aaKnown RBP18.22■□□□□ 0.51
CCNT2-204ENST00000419781 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
CCNT2-204ENST00000419781 PLCH2O75038 1416 aa18.22■□□□□ 0.51
CCNT2-204ENST00000419781 CALRP27797 417 aaKnown RBP18.21■□□□□ 0.51
CCNT2-204ENST00000419781 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
CCNT2-204ENST00000419781 HMOX1P09601 288 aa18.21■□□□□ 0.51
CCNT2-204ENST00000419781 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCNT2-204ENST00000419781 STRN4Q9NRL3 753 aa18.21■□□□□ 0.51
CCNT2-204ENST00000419781 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
CCNT2-204ENST00000419781 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
CCNT2-204ENST00000419781 CRBNQ96SW2 442 aa18.2■□□□□ 0.5
CCNT2-204ENST00000419781 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.2■□□□□ 0.5
CCNT2-204ENST00000419781 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
CCNT2-204ENST00000419781 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
CCNT2-204ENST00000419781 CNNM1Q9NRU3 951 aa18.2■□□□□ 0.5
CCNT2-204ENST00000419781 SYCP1Q15431 976 aa18.19■□□□□ 0.5
CCNT2-204ENST00000419781 ZNF592Q92610 1267 aa18.19■□□□□ 0.5
CCNT2-204ENST00000419781 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
CCNT2-204ENST00000419781 PDE4AP27815 886 aa18.19■□□□□ 0.5
CCNT2-204ENST00000419781 CHMP5Q9NZZ3 219 aa18.19■□□□□ 0.5
CCNT2-204ENST00000419781 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
CCNT2-204ENST00000419781 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
CCNT2-204ENST00000419781 TEX35Q5T0J7 233 aa18.18■□□□□ 0.5
CCNT2-204ENST00000419781 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms