RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
DSP-202ENST00000418664 GTF2F1P35269 517 aaKnown RBP eCLIP13.99□□□□□ -0.17
DSP-202ENST00000418664 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
DSP-202ENST00000418664 CFAP58Q5T655 872 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 ERCC3P19447 782 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 ATP2B1P20020 1258 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 PDCL2Q8N4E4 241 aa13.98□□□□□ -0.17
DSP-202ENST00000418664 FBF1Q8TES7 1133 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 C6orf163Q5TEZ5 329 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 IQCEQ6IPM2 695 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 CEP83Q9Y592 693 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 CCDC6Q16204 474 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 SWAP70Q9UH65 585 aa13.97□□□□□ -0.17
DSP-202ENST00000418664 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
DSP-202ENST00000418664 MRE11P49959 708 aa13.96□□□□□ -0.17
DSP-202ENST00000418664 CAVIN1Q6NZI2 390 aaKnown RBP13.96□□□□□ -0.17
DSP-202ENST00000418664 NUP133Q8WUM0 1156 aa13.96□□□□□ -0.17
DSP-202ENST00000418664 PABPN1LA6NDY0 278 aaKnown RBP13.96□□□□□ -0.17
DSP-202ENST00000418664 FERP16591 822 aa13.96□□□□□ -0.17
DSP-202ENST00000418664 TMF1P82094 1093 aa13.96□□□□□ -0.17
DSP-202ENST00000418664 TSPY26PQ9H489 355 aa13.96□□□□□ -0.17
DSP-202ENST00000418664 TPD52P55327 224 aaPredicted RBP13.96□□□□□ -0.17
DSP-202ENST00000418664 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
DSP-202ENST00000418664 SARNPP82979 210 aaKnown RBP13.95□□□□□ -0.18
DSP-202ENST00000418664 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
DSP-202ENST00000418664 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
DSP-202ENST00000418664 TXLNBQ8N3L3 684 aa13.95□□□□□ -0.18
DSP-202ENST00000418664 HDGFP51858 240 aaKnown RBP13.95□□□□□ -0.18
DSP-202ENST00000418664 GBP7Q8N8V2 638 aaPredicted RBP13.95□□□□□ -0.18
DSP-202ENST00000418664 ARL1P40616 181 aaPredicted RBP13.95□□□□□ -0.18
DSP-202ENST00000418664 JAKMIP3Q5VZ66 844 aa13.95□□□□□ -0.18
DSP-202ENST00000418664 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
DSP-202ENST00000418664 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■□□□□ 9.5
DSP-202ENST00000418664 V9GYY5 206 aaPredicted RBP13.94□□□□□ -0.18
DSP-202ENST00000418664 CA8P35219 290 aa13.94□□□□□ -0.18
DSP-202ENST00000418664 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
DSP-202ENST00000418664 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
DSP-202ENST00000418664 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
DSP-202ENST00000418664 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
DSP-202ENST00000418664 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
DSP-202ENST00000418664 PDE4AP27815 886 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 PSMC4P43686 418 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 KIAA1328Q86T90 577 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 MXRA7P84157 204 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 PPP1R9BQ96SB3 815 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 FAM114A2Q9NRY5 505 aa13.93□□□□□ -0.18
DSP-202ENST00000418664 GOLGA6L9A6NEM1 432 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 TRIM21P19474 475 aaKnown RBP13.92□□□□□ -0.18
DSP-202ENST00000418664 FAM107BQ9H098 131 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 PLIN1O60240 522 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 XBP1P17861 261 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 RAB3IL1Q8TBN0 382 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 AMPHP49418 695 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 LCA5Q86VQ0 697 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 GCOM1H8Y6P7 765 aaPredicted RBP13.92□□□□□ -0.18
DSP-202ENST00000418664 MYZAPP0CAP1 466 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
DSP-202ENST00000418664 TAF4BQ92750 862 aa13.91□□□□□ -0.18
DSP-202ENST00000418664 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
DSP-202ENST00000418664 EPB41L2O43491 1005 aaKnown RBP13.91□□□□□ -0.18
DSP-202ENST00000418664 MORC4Q8TE76 937 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
DSP-202ENST00000418664 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
DSP-202ENST00000418664 CHMP2AO43633 222 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
DSP-202ENST00000418664 DRC1Q96MC2 740 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 SSX2IPQ9Y2D8 614 aa13.9□□□□□ -0.18
DSP-202ENST00000418664 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 CEP57Q86XR8 500 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 SATB1Q01826 763 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 LRRC43Q8N309 656 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
DSP-202ENST00000418664 ZMYND15Q9H091 742 aa13.89□□□□□ -0.19
DSP-202ENST00000418664 SH3BP5O60239 455 aa13.88□□□□□ -0.19
DSP-202ENST00000418664 WASHC4Q2M389 1173 aa13.88□□□□□ -0.19
DSP-202ENST00000418664 UBXN4Q92575 508 aa13.88□□□□□ -0.19
DSP-202ENST00000418664 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
DSP-202ENST00000418664 DNA2P51530 1060 aa13.88□□□□□ -0.19
DSP-202ENST00000418664 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
DSP-202ENST00000418664 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
DSP-202ENST00000418664 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
DSP-202ENST00000418664 SPECC1LQ69YQ0 1117 aa13.87□□□□□ -0.19
DSP-202ENST00000418664 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms