RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
NIFKP3-201ENST00000417799 SPSB2Q99619 263 aa9.86□□□□□ -0.83
NIFKP3-201ENST00000417799 JUNDP17535 347 aa9.85□□□□□ -0.83
NIFKP3-201ENST00000417799 NR6A1Q15406 480 aa9.85□□□□□ -0.83
NIFKP3-201ENST00000417799 ARXQ96QS3 562 aa9.85□□□□□ -0.83
NIFKP3-201ENST00000417799 ARID3AQ99856 593 aa9.85□□□□□ -0.83
NIFKP3-201ENST00000417799 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
NIFKP3-201ENST00000417799 ZPR1O75312 459 aa9.84□□□□□ -0.83
NIFKP3-201ENST00000417799 MSS51Q4VC12 460 aa9.84□□□□□ -0.83
NIFKP3-201ENST00000417799 MTRQ99707 1265 aa9.84□□□□□ -0.83
NIFKP3-201ENST00000417799 FAM160A2Q8N612 972 aaPredicted RBP9.83□□□□□ -0.84
NIFKP3-201ENST00000417799 IRF5Q13568 498 aa9.82□□□□□ -0.84
NIFKP3-201ENST00000417799 PTPRNQ16849 979 aa9.82□□□□□ -0.84
NIFKP3-201ENST00000417799 TLL1O43897 1013 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 GPR37L1O60883 481 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 ADH1BP00325 375 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 IL21Q9HBE4 155 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 PDS5BQ9NTI5 1447 aa9.81□□□□□ -0.84
NIFKP3-201ENST00000417799 DXOO77932 396 aaKnown RBP9.8□□□□□ -0.84
NIFKP3-201ENST00000417799 WASHC4Q2M389 1173 aa9.8□□□□□ -0.84
NIFKP3-201ENST00000417799 CCDC82Q8N4S0 544 aa9.8□□□□□ -0.84
NIFKP3-201ENST00000417799 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
NIFKP3-201ENST00000417799 F12P00748 615 aaPredicted RBP9.79□□□□□ -0.84
NIFKP3-201ENST00000417799 MMP16P51512 607 aa9.79□□□□□ -0.84
NIFKP3-201ENST00000417799 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
NIFKP3-201ENST00000417799 PRDM9Q9NQV7 894 aa9.79□□□□□ -0.84
NIFKP3-201ENST00000417799 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
NIFKP3-201ENST00000417799 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
NIFKP3-201ENST00000417799 CTHP32929 405 aa9.78□□□□□ -0.84
NIFKP3-201ENST00000417799 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
NIFKP3-201ENST00000417799 MAP10Q9P2G4 905 aa9.78□□□□□ -0.84
NIFKP3-201ENST00000417799 PRDM2Q13029 1718 aa9.77□□□□□ -0.85
NIFKP3-201ENST00000417799 CCNYL3P0C7X3 344 aa9.77□□□□□ -0.85
NIFKP3-201ENST00000417799 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.85
NIFKP3-201ENST00000417799 VAC14Q08AM6 782 aa9.76□□□□□ -0.85
NIFKP3-201ENST00000417799 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
NIFKP3-201ENST00000417799 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
NIFKP3-201ENST00000417799 EVA1BQ9NVM1 165 aa9.76□□□□□ -0.85
NIFKP3-201ENST00000417799 SERPINA10Q9UK55 444 aa9.76□□□□□ -0.85
NIFKP3-201ENST00000417799 GLMNQ92990 594 aa9.75□□□□□ -0.85
NIFKP3-201ENST00000417799 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
NIFKP3-201ENST00000417799 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
NIFKP3-201ENST00000417799 CEP164Q9UPV0 1460 aa9.74□□□□□ -0.85
NIFKP3-201ENST00000417799 KCNH2Q12809 1159 aa9.74□□□□□ -0.85
NIFKP3-201ENST00000417799 WRNQ14191 1432 aaPredicted RBP eCLIP9.73□□□□□ -0.85
NIFKP3-201ENST00000417799 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
NIFKP3-201ENST00000417799 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
NIFKP3-201ENST00000417799 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.86
NIFKP3-201ENST00000417799 S1PR4O95977 384 aa9.7□□□□□ -0.86
NIFKP3-201ENST00000417799 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
NIFKP3-201ENST00000417799 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
NIFKP3-201ENST00000417799 SOX11P35716 441 aa9.69□□□□□ -0.86
NIFKP3-201ENST00000417799 KCNC4Q03721 635 aa9.69□□□□□ -0.86
NIFKP3-201ENST00000417799 NR1H3Q13133 447 aa9.69□□□□□ -0.86
NIFKP3-201ENST00000417799 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 RGS20O76081 388 aa9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 GPKOWQ92917 476 aaPredicted RBP eCLIP9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 ALG2Q9H553 416 aa9.68□□□□□ -0.86
NIFKP3-201ENST00000417799 CUX1P39880 1505 aa9.67□□□□□ -0.86
NIFKP3-201ENST00000417799 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
NIFKP3-201ENST00000417799 NBPF14Q5TI25 921 aa9.67□□□□□ -0.86
NIFKP3-201ENST00000417799 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 PDXDC2PQ6P474 469 aa9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
NIFKP3-201ENST00000417799 TOP2BQ02880 1626 aa9.65□□□□□ -0.86
NIFKP3-201ENST00000417799 PTK2Q05397 1052 aa9.65□□□□□ -0.86
NIFKP3-201ENST00000417799 GPSM3Q9Y4H4 160 aa9.65□□□□□ -0.86
NIFKP3-201ENST00000417799 DNMBPQ6XZF7 1577 aa9.65□□□□□ -0.86
NIFKP3-201ENST00000417799 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
NIFKP3-201ENST00000417799 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
NIFKP3-201ENST00000417799 WDR62O43379 1518 aa9.62□□□□□ -0.87
NIFKP3-201ENST00000417799 PPEF1O14829 653 aaPredicted RBP9.62□□□□□ -0.87
NIFKP3-201ENST00000417799 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
NIFKP3-201ENST00000417799 BAP1Q92560 729 aa9.61□□□□□ -0.87
NIFKP3-201ENST00000417799 ARHGAP9Q9BRR9 750 aa9.61□□□□□ -0.87
NIFKP3-201ENST00000417799 FGD5Q6ZNL6 1462 aa9.6□□□□□ -0.87
NIFKP3-201ENST00000417799 GGCXP38435 758 aa9.6□□□□□ -0.87
NIFKP3-201ENST00000417799 OCSTAMPQ9BR26 566 aa9.6□□□□□ -0.87
NIFKP3-201ENST00000417799 PPP1R12CQ9BZL4 782 aa9.6□□□□□ -0.87
NIFKP3-201ENST00000417799 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
NIFKP3-201ENST00000417799 RNF223E7ERA6 249 aa9.59□□□□□ -0.87
NIFKP3-201ENST00000417799 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
NIFKP3-201ENST00000417799 UCN2Q96RP3 112 aa9.59□□□□□ -0.87
NIFKP3-201ENST00000417799 SOGA1O94964 1423 aa9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms