RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 C14orf93Q9H972 538 aaKnown RBP26.62■■□□□ 1.85
VCP-202ENST00000417448 NUP188Q5SRE5 1749 aa26.61■■□□□ 1.85
VCP-202ENST00000417448 CFAP70Q5T0N1 1121 aa26.59■■□□□ 1.85
VCP-202ENST00000417448 TRIM37O94972 964 aa26.58■■□□□ 1.85
VCP-202ENST00000417448 YY1P25490 414 aa26.58■■□□□ 1.85
VCP-202ENST00000417448 DLC1Q96QB1 1528 aa26.58■■□□□ 1.85
VCP-202ENST00000417448 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.84
VCP-202ENST00000417448 PRR36Q9H6K5 1346 aa26.55■■□□□ 1.84
VCP-202ENST00000417448 SPATA31A1Q5TZJ5 1347 aa26.54■■□□□ 1.84
VCP-202ENST00000417448 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
VCP-202ENST00000417448 GPRASP1Q5JY77 1395 aa26.53■■□□□ 1.84
VCP-202ENST00000417448 PARD3Q8TEW0 1356 aa26.53■■□□□ 1.84
VCP-202ENST00000417448 PRDM11Q9NQV5 511 aa26.52■■□□□ 1.84
VCP-202ENST00000417448 PHRF1Q9P1Y6 1649 aaKnown RBP26.52■■□□□ 1.84
VCP-202ENST00000417448 APBA3O96018 575 aa26.51■■□□□ 1.83
VCP-202ENST00000417448 FAM196AQ6ZSG2 479 aa26.51■■□□□ 1.83
VCP-202ENST00000417448 ADGRB1O14514 1584 aa26.5■■□□□ 1.83
VCP-202ENST00000417448 TULP4Q9NRJ4 1543 aa26.5■■□□□ 1.83
VCP-202ENST00000417448 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
VCP-202ENST00000417448 HIRIP3Q9BW71 556 aaPredicted RBP26.5■■□□□ 1.83
VCP-202ENST00000417448 POGKQ9P215 609 aa26.5■■□□□ 1.83
VCP-202ENST00000417448 KIAA0232Q92628 1395 aa26.48■■□□□ 1.83
VCP-202ENST00000417448 RAB3GAP2Q9H2M9 1393 aa26.47■■□□□ 1.83
VCP-202ENST00000417448 CHRNA2Q15822 529 aa26.46■■□□□ 1.83
VCP-202ENST00000417448 CAMTA1Q9Y6Y1 1673 aa26.45■■□□□ 1.82
VCP-202ENST00000417448 STRN4Q9NRL3 753 aa26.44■■□□□ 1.82
VCP-202ENST00000417448 MINK1Q8N4C8 1332 aaPredicted RBP26.43■■□□□ 1.82
VCP-202ENST00000417448 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
VCP-202ENST00000417448 EIF3AQ14152 1382 aaKnown RBP26.42■■□□□ 1.82
VCP-202ENST00000417448 ITSN1Q15811 1721 aa26.42■■□□□ 1.82
VCP-202ENST00000417448 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
VCP-202ENST00000417448 NGDNQ8NEJ9 315 aaKnown RBP26.4■■□□□ 1.82
VCP-202ENST00000417448 TRAK1Q9UPV9 953 aa26.4■■□□□ 1.82
VCP-202ENST00000417448 UTRNP46939 3433 aa26.39■■□□□ 1.82
VCP-202ENST00000417448 WASLO00401 505 aaPredicted RBP26.39■■□□□ 1.82
VCP-202ENST00000417448 SSH2Q76I76 1423 aa26.39■■□□□ 1.81
VCP-202ENST00000417448 ZC3H6P61129 1189 aaKnown RBP26.38■■□□□ 1.81
VCP-202ENST00000417448 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
VCP-202ENST00000417448 ATP7BP35670 1465 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 NINLQ9Y2I6 1382 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 NBPF8Q3BBV2 869 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 NBPF14Q5TI25 921 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 SPON1Q9HCB6 807 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 LMO7Q8WWI1 1683 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 NRKQ7Z2Y5 1582 aa26.37■■□□□ 1.81
VCP-202ENST00000417448 PDE3BQ13370 1112 aa26.36■■□□□ 1.81
VCP-202ENST00000417448 PPP1R1BQ9UD71 204 aaPredicted RBP26.36■■□□□ 1.81
VCP-202ENST00000417448 KCNQ2O43526 872 aa26.35■■□□□ 1.81
VCP-202ENST00000417448 TRIM26Q12899 539 aaPredicted RBP26.35■■□□□ 1.81
VCP-202ENST00000417448 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
VCP-202ENST00000417448 CASZ1Q86V15 1759 aa26.34■■□□□ 1.81
VCP-202ENST00000417448 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.81
VCP-202ENST00000417448 LARP1Q6PKG0 1096 aaKnown RBP26.33■■□□□ 1.81
VCP-202ENST00000417448 ARHGEF28Q8N1W1 1705 aaKnown RBP26.33■■□□□ 1.81
VCP-202ENST00000417448 PEAK1Q9H792 1746 aa26.32■■□□□ 1.8
VCP-202ENST00000417448 RGPD3A6NKT7 1758 aaPredicted RBP26.32■■□□□ 1.8
VCP-202ENST00000417448 RGPD4Q7Z3J3 1758 aa26.32■■□□□ 1.8
VCP-202ENST00000417448 SBF2Q86WG5 1849 aa26.31■■□□□ 1.8
VCP-202ENST00000417448 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
VCP-202ENST00000417448 EVA1CP58658 441 aa26.29■■□□□ 1.8
VCP-202ENST00000417448 TCP11L2Q8N4U5 519 aa26.29■■□□□ 1.8
VCP-202ENST00000417448 NUDT16Q96DE0 195 aaKnown RBP26.27■■□□□ 1.8
VCP-202ENST00000417448 MYOM1P52179 1685 aa26.26■■□□□ 1.79
VCP-202ENST00000417448 DCAF8L1A6NGE4 600 aa26.25■■□□□ 1.79
VCP-202ENST00000417448 ANO8Q9HCE9 1232 aaPredicted RBP26.25■■□□□ 1.79
VCP-202ENST00000417448 LRRC37A3O60309 1634 aa26.25■■□□□ 1.79
VCP-202ENST00000417448 POLR3AO14802 1390 aaPredicted RBP26.24■■□□□ 1.79
VCP-202ENST00000417448 CPDO75976 1380 aa26.24■■□□□ 1.79
VCP-202ENST00000417448 PDGFDQ9GZP0 370 aaPredicted RBP26.23■■□□□ 1.79
VCP-202ENST00000417448 COL5A2P05997 1499 aaPredicted RBP26.23■■□□□ 1.79
VCP-202ENST00000417448 THRAP3Q9Y2W1 955 aaKnown RBP26.21■■□□□ 1.79
VCP-202ENST00000417448 OVOS2A0A0G2JMS6 1433 aa26.21■■□□□ 1.79
VCP-202ENST00000417448 OVOS2A0A0J9YW53 1432 aa26.21■■□□□ 1.79
VCP-202ENST00000417448 OVOS2Q6IE36 1432 aa26.21■■□□□ 1.79
VCP-202ENST00000417448 USP19O94966 1318 aa26.2■■□□□ 1.79
VCP-202ENST00000417448 ACEP12821 1306 aa26.2■■□□□ 1.79
VCP-202ENST00000417448 ZNF784Q8NCA9 323 aaPredicted RBP26.2■■□□□ 1.78
VCP-202ENST00000417448 PTF1AQ7RTS3 328 aa26.18■■□□□ 1.78
VCP-202ENST00000417448 WNK3Q9BYP7 1800 aa26.17■■□□□ 1.78
VCP-202ENST00000417448 PLSCR1O15162 318 aa26.17■■□□□ 1.78
VCP-202ENST00000417448 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
VCP-202ENST00000417448 ABTB2Q8N961 1025 aa26.16■■□□□ 1.78
VCP-202ENST00000417448 CDK19Q9BWU1 502 aa26.16■■□□□ 1.78
VCP-202ENST00000417448 CRB1P82279 1406 aa26.15■■□□□ 1.78
VCP-202ENST00000417448 PTGER2P43116 358 aa26.15■■□□□ 1.78
VCP-202ENST00000417448 CHD4Q14839 1912 aa26.14■■□□□ 1.78
VCP-202ENST00000417448 ZBTB7AO95365 584 aa26.14■■□□□ 1.78
VCP-202ENST00000417448 DCAF11Q8TEB1 546 aa26.14■■□□□ 1.78
VCP-202ENST00000417448 C11orf95C9JLR9 678 aaPredicted RBP26.13■■□□□ 1.77
VCP-202ENST00000417448 PROM2Q8N271 834 aa26.13■■□□□ 1.77
VCP-202ENST00000417448 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
VCP-202ENST00000417448 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
VCP-202ENST00000417448 PLEKHG3A1L390 1219 aa26.11■■□□□ 1.77
VCP-202ENST00000417448 GCP02774 474 aa26.11■■□□□ 1.77
VCP-202ENST00000417448 CCDC61Q9Y6R9 512 aa26.11■■□□□ 1.77
VCP-202ENST00000417448 BCL11BQ9C0K0 894 aaPredicted RBP26.09■■□□□ 1.77
VCP-202ENST00000417448 COL18A1P39060 1754 aa26.08■■□□□ 1.77
VCP-202ENST00000417448 DDB1Q16531 1140 aa26.07■■□□□ 1.76
VCP-202ENST00000417448 ATF5Q9Y2D1 282 aaPredicted RBP26.07■■□□□ 1.76
VCP-202ENST00000417448 SENP3-EIF4A1A0A087X0R7 540 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms