RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 TRIM37O94972 964 aa13.33□□□□□ -0.28
SMIM12-201ENST00000417239 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
SMIM12-201ENST00000417239 NRKQ7Z2Y5 1582 aa13.32□□□□□ -0.28
SMIM12-201ENST00000417239 SBF2Q86WG5 1849 aa13.32□□□□□ -0.28
SMIM12-201ENST00000417239 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
SMIM12-201ENST00000417239 ANKARQ7Z5J8 1434 aa13.31□□□□□ -0.28
SMIM12-201ENST00000417239 MYOM1P52179 1685 aa13.31□□□□□ -0.28
SMIM12-201ENST00000417239 APBA3O96018 575 aa13.3□□□□□ -0.28
SMIM12-201ENST00000417239 FAM196AQ6ZSG2 479 aa13.3□□□□□ -0.28
SMIM12-201ENST00000417239 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
SMIM12-201ENST00000417239 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
SMIM12-201ENST00000417239 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
SMIM12-201ENST00000417239 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
SMIM12-201ENST00000417239 CEP350Q5VT06 3117 aa13.29□□□□□ -0.28
SMIM12-201ENST00000417239 ITSN1Q15811 1721 aa13.28□□□□□ -0.28
SMIM12-201ENST00000417239 PEAK1Q9H792 1746 aa13.28□□□□□ -0.28
SMIM12-201ENST00000417239 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
SMIM12-201ENST00000417239 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
SMIM12-201ENST00000417239 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
SMIM12-201ENST00000417239 KCNQ2O43526 872 aa13.27□□□□□ -0.29
SMIM12-201ENST00000417239 PMFBP1Q8TBY8 1022 aa13.27□□□□□ -0.29
SMIM12-201ENST00000417239 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
SMIM12-201ENST00000417239 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
SMIM12-201ENST00000417239 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
SMIM12-201ENST00000417239 NBPF14Q5TI25 921 aa13.26□□□□□ -0.29
SMIM12-201ENST00000417239 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
SMIM12-201ENST00000417239 LMO7Q8WWI1 1683 aa13.26□□□□□ -0.29
SMIM12-201ENST00000417239 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
SMIM12-201ENST00000417239 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
SMIM12-201ENST00000417239 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
SMIM12-201ENST00000417239 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
SMIM12-201ENST00000417239 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
SMIM12-201ENST00000417239 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
SMIM12-201ENST00000417239 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
SMIM12-201ENST00000417239 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
SMIM12-201ENST00000417239 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
SMIM12-201ENST00000417239 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
SMIM12-201ENST00000417239 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
SMIM12-201ENST00000417239 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
SMIM12-201ENST00000417239 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMIM12-201ENST00000417239 AKAP12Q02952 1782 aa13.21□□□□□ -0.29
SMIM12-201ENST00000417239 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.3
SMIM12-201ENST00000417239 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
SMIM12-201ENST00000417239 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 PRR36Q9H6K5 1346 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 PDE3BQ13370 1112 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 C14orf93Q9H972 538 aaKnown RBP13.2□□□□□ -0.3
SMIM12-201ENST00000417239 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
SMIM12-201ENST00000417239 ATP7BP35670 1465 aa13.19□□□□□ -0.3
SMIM12-201ENST00000417239 C1QTNF8P60827 252 aa13.19□□□□□ -0.3
SMIM12-201ENST00000417239 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
SMIM12-201ENST00000417239 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
SMIM12-201ENST00000417239 ANO8Q9HCE9 1232 aaPredicted RBP13.18□□□□□ -0.3
SMIM12-201ENST00000417239 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SMIM12-201ENST00000417239 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
SMIM12-201ENST00000417239 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
SMIM12-201ENST00000417239 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
SMIM12-201ENST00000417239 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
SMIM12-201ENST00000417239 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
SMIM12-201ENST00000417239 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
SMIM12-201ENST00000417239 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
SMIM12-201ENST00000417239 PTGER2P43116 358 aa13.15□□□□□ -0.3
SMIM12-201ENST00000417239 HIRIP3Q9BW71 556 aaPredicted RBP13.15□□□□□ -0.3
SMIM12-201ENST00000417239 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
SMIM12-201ENST00000417239 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
SMIM12-201ENST00000417239 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
SMIM12-201ENST00000417239 POGKQ9P215 609 aa13.14□□□□□ -0.31
SMIM12-201ENST00000417239 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
SMIM12-201ENST00000417239 PLSCR1O15162 318 aa13.13□□□□□ -0.31
SMIM12-201ENST00000417239 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
SMIM12-201ENST00000417239 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
SMIM12-201ENST00000417239 CPDO75976 1380 aa13.12□□□□□ -0.31
SMIM12-201ENST00000417239 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
SMIM12-201ENST00000417239 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
SMIM12-201ENST00000417239 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
SMIM12-201ENST00000417239 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
SMIM12-201ENST00000417239 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
SMIM12-201ENST00000417239 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
SMIM12-201ENST00000417239 EVA1CP58658 441 aa13.11□□□□□ -0.31
SMIM12-201ENST00000417239 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
SMIM12-201ENST00000417239 FHDC1Q9C0D6 1143 aaPredicted RBP13.11□□□□□ -0.31
SMIM12-201ENST00000417239 PAPPAQ13219 1627 aa13.1□□□□□ -0.31
SMIM12-201ENST00000417239 CRB1P82279 1406 aa13.1□□□□□ -0.31
SMIM12-201ENST00000417239 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
SMIM12-201ENST00000417239 COL18A1P39060 1754 aa13.09□□□□□ -0.31
SMIM12-201ENST00000417239 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
SMIM12-201ENST00000417239 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
SMIM12-201ENST00000417239 PROM2Q8N271 834 aa13.09□□□□□ -0.31
SMIM12-201ENST00000417239 POLR3AO14802 1390 aaPredicted RBP13.08□□□□□ -0.31
SMIM12-201ENST00000417239 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
SMIM12-201ENST00000417239 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 USP19O94966 1318 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
SMIM12-201ENST00000417239 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
SMIM12-201ENST00000417239 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms