RNA–Protein interactions for RNA: ENST00000416262.6

NRXN1-213, Transcript of neurexin 1, humanhuman

TSL 2

Gene NRXN1, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-213ENST00000416262 SH3BP2P78314 561 aa8.29□□□□□ -1.08
NRXN1-213ENST00000416262 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.29□□□□□ -1.08
NRXN1-213ENST00000416262 ABCC8Q09428 1581 aa8.29□□□□□ -1.08
NRXN1-213ENST00000416262 GNPATO15228 680 aa8.28□□□□□ -1.08
NRXN1-213ENST00000416262 IRS1P35568 1242 aa8.28□□□□□ -1.08
NRXN1-213ENST00000416262 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
NRXN1-213ENST00000416262 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
NRXN1-213ENST00000416262 KCNV2Q8TDN2 545 aa8.27□□□□□ -1.09
NRXN1-213ENST00000416262 TLL2Q9Y6L7 1015 aa8.27□□□□□ -1.09
NRXN1-213ENST00000416262 EEA1Q15075 1411 aa8.27□□□□□ -1.09
NRXN1-213ENST00000416262 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 CD46P15529 392 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
NRXN1-213ENST00000416262 USP46P62068 366 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 PTCRAQ6ISU1 281 aaPredicted RBP8.26□□□□□ -1.09
NRXN1-213ENST00000416262 SVOPQ8N4V2 548 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
NRXN1-213ENST00000416262 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
NRXN1-213ENST00000416262 KDM4AO75164 1064 aa8.25□□□□□ -1.09
NRXN1-213ENST00000416262 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
NRXN1-213ENST00000416262 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
NRXN1-213ENST00000416262 NESP48681 1621 aa8.23□□□□□ -1.09
NRXN1-213ENST00000416262 TOP2BQ02880 1626 aa8.23□□□□□ -1.09
NRXN1-213ENST00000416262 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
NRXN1-213ENST00000416262 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
NRXN1-213ENST00000416262 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
NRXN1-213ENST00000416262 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
NRXN1-213ENST00000416262 CEP164Q9UPV0 1460 aa8.22□□□□□ -1.09
NRXN1-213ENST00000416262 SLURP2P0DP57 97 aa8.22□□□□□ -1.09
NRXN1-213ENST00000416262 FAM9AQ8IZU1 332 aaPredicted RBP8.22□□□□□ -1.09
NRXN1-213ENST00000416262 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
NRXN1-213ENST00000416262 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
NRXN1-213ENST00000416262 PRDM2Q13029 1718 aa8.22□□□□□ -1.09
NRXN1-213ENST00000416262 NANOS1Q8WY41 292 aaKnown RBP8.21□□□□□ -1.1
NRXN1-213ENST00000416262 SYNJ1O43426 1573 aa8.21□□□□□ -1.1
NRXN1-213ENST00000416262 GPR37O15354 613 aa8.2□□□□□ -1.1
NRXN1-213ENST00000416262 HOXA2O43364 376 aa8.2□□□□□ -1.1
NRXN1-213ENST00000416262 CCNYL3P0C7X3 344 aa8.2□□□□□ -1.1
NRXN1-213ENST00000416262 MARSP56192 900 aaKnown RBP8.2□□□□□ -1.1
NRXN1-213ENST00000416262 RETREG3Q86VR2 466 aa8.2□□□□□ -1.1
NRXN1-213ENST00000416262 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
NRXN1-213ENST00000416262 BIVM-ERCC5R4GMW8 1640 aa8.2□□□□□ -1.1
NRXN1-213ENST00000416262 CUX1P39880 1505 aa8.19□□□□□ -1.1
NRXN1-213ENST00000416262 MSTNO14793 375 aa8.19□□□□□ -1.1
NRXN1-213ENST00000416262 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
NRXN1-213ENST00000416262 HLA-CQ95604 372 aa8.18□□□□□ -1.1
NRXN1-213ENST00000416262 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
NRXN1-213ENST00000416262 SOGA1O94964 1423 aa8.18□□□□□ -1.1
NRXN1-213ENST00000416262 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
NRXN1-213ENST00000416262 C6orf118Q5T5N4 469 aa8.17□□□□□ -1.1
NRXN1-213ENST00000416262 ZNF511Q8NB15 262 aa8.17□□□□□ -1.1
NRXN1-213ENST00000416262 DNMT3LQ9UJW3 386 aa8.17□□□□□ -1.1
NRXN1-213ENST00000416262 SOS2Q07890 1332 aaPredicted RBP8.17□□□□□ -1.1
NRXN1-213ENST00000416262 KIF27Q86VH2 1401 aa8.17□□□□□ -1.1
NRXN1-213ENST00000416262 UPP2O95045 317 aa8.16□□□□□ -1.1
NRXN1-213ENST00000416262 ZIC2O95409 532 aaPredicted RBP8.16□□□□□ -1.1
NRXN1-213ENST00000416262 PTPRNQ16849 979 aa8.16□□□□□ -1.1
NRXN1-213ENST00000416262 DNMBPQ6XZF7 1577 aa8.16□□□□□ -1.1
NRXN1-213ENST00000416262 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
NRXN1-213ENST00000416262 TOPBP1Q92547 1522 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 MS4A1P11836 297 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 BMP2P12643 396 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 PLA2G4EQ3MJ16 856 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 PAXIP1Q6ZW49 1069 aaPredicted RBP8.15□□□□□ -1.1
NRXN1-213ENST00000416262 WHAMMQ8TF30 809 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 CFAP44Q96MT7 982 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 SPOCK3Q9BQ16 436 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
NRXN1-213ENST00000416262 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 SEMA3EO15041 775 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.14□□□□□ -1.11
NRXN1-213ENST00000416262 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 MEIOBQ8N635 442 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 BAP1Q92560 729 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 EVA1BQ9NVM1 165 aa8.14□□□□□ -1.11
NRXN1-213ENST00000416262 MRC2Q9UBG0 1479 aa8.13□□□□□ -1.11
NRXN1-213ENST00000416262 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
NRXN1-213ENST00000416262 NR5A1Q13285 461 aa8.12□□□□□ -1.11
NRXN1-213ENST00000416262 P3H3Q8IVL6 736 aa8.12□□□□□ -1.11
NRXN1-213ENST00000416262 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
NRXN1-213ENST00000416262 URB2Q14146 1524 aaKnown RBP8.12□□□□□ -1.11
NRXN1-213ENST00000416262 RUSC2Q8N2Y8 1516 aa8.12□□□□□ -1.11
NRXN1-213ENST00000416262 ERCC6Q03468 1493 aa8.12□□□□□ -1.11
NRXN1-213ENST00000416262 PROCP04070 461 aa8.11□□□□□ -1.11
NRXN1-213ENST00000416262 RBM26Q5T8P6 1007 aaKnown RBP8.11□□□□□ -1.11
NRXN1-213ENST00000416262 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
NRXN1-213ENST00000416262 Q8N3U1 123 aa8.11□□□□□ -1.11
NRXN1-213ENST00000416262 POLA1P09884 1462 aaPredicted RBP8.11□□□□□ -1.11
NRXN1-213ENST00000416262 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
NRXN1-213ENST00000416262 GUCA2AQ02747 115 aa8.1□□□□□ -1.11
NRXN1-213ENST00000416262 PTSQ03393 145 aa8.1□□□□□ -1.11
NRXN1-213ENST00000416262 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
NRXN1-213ENST00000416262 CUX2O14529 1486 aa8.1□□□□□ -1.11
NRXN1-213ENST00000416262 ABCA10Q8WWZ4 1543 aa8.09□□□□□ -1.11
NRXN1-213ENST00000416262 GOLGA3Q08378 1498 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms