RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 RIPK4P57078 832 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 PDE4AP27815 886 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 NEFHP12036 1026 aa13.14□□□□□ -0.31
CACNA1C-216ENST00000399638 MYL6BP14649 208 aa13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 PSMD1Q99460 953 aa13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
CACNA1C-216ENST00000399638 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 POLD1P28340 1107 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 ERC2O15083 957 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 DESP17661 470 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 USP5P45974 858 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
CACNA1C-216ENST00000399638 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 PANK3Q9H999 370 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 GPS2Q13227 327 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
CACNA1C-216ENST00000399638 H0YHG0 523 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
CACNA1C-216ENST00000399638 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 MTHFSP49914 203 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 ATP6V1DQ9Y5K8 247 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
CACNA1C-216ENST00000399638 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-216ENST00000399638 FAM161AQ3B820 660 aa13.08□□□□□ -0.31
CACNA1C-216ENST00000399638 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
CACNA1C-216ENST00000399638 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-216ENST00000399638 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 AAMPQ13685 434 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 TXLNAP40222 546 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 TNIP1Q15025 636 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 E9PSI1 815 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
CACNA1C-216ENST00000399638 TOM1O60784 492 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
CACNA1C-216ENST00000399638 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 STARD3NLO95772 234 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CACNA1C-216ENST00000399638 TEX35Q5T0J7 233 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 GAS2L2Q8NHY3 880 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 NF2P35240 595 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 LIG1P18858 919 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CACNA1C-216ENST00000399638 SIL1Q9H173 461 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms