RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
CACNA1C-210ENST00000399606 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1C-210ENST00000399606 CUX1P39880 1505 aa13.15□□□□□ -0.3
CACNA1C-210ENST00000399606 KIF15Q9NS87 1388 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 RIPK4P57078 832 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 PDE4AP27815 886 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 NEFHP12036 1026 aa13.14□□□□□ -0.31
CACNA1C-210ENST00000399606 MYL6BP14649 208 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 ATP6V1DQ9Y5K8 247 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 PSMD1Q99460 953 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
CACNA1C-210ENST00000399606 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 LRRC9Q6ZRR7 1453 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 POLD1P28340 1107 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 CCDC158Q5M9N0 1113 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 ERC2O15083 957 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 DESP17661 470 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 USP5P45974 858 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 SOGA3Q5TF21 947 aa13.12□□□□□ -0.31
CACNA1C-210ENST00000399606 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 CENPQQ7L2Z9 268 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 PANK3Q9H999 370 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
CACNA1C-210ENST00000399606 H0YHG0 523 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
CACNA1C-210ENST00000399606 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 RAI14Q9P0K7 980 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 MTHFSP49914 203 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
CACNA1C-210ENST00000399606 IGHMBP2P38935 993 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-210ENST00000399606 DCTN1Q14203 1278 aa13.08□□□□□ -0.31
CACNA1C-210ENST00000399606 FAM161AQ3B820 660 aa13.08□□□□□ -0.31
CACNA1C-210ENST00000399606 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
CACNA1C-210ENST00000399606 ARGLU1Q9NWB6 273 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-210ENST00000399606 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-210ENST00000399606 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 AAMPQ13685 434 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 VPS37CA5D8V6 355 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 TXLNAP40222 546 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 TNIP1Q15025 636 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 ROCK1Q13464 1354 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 E9PSI1 815 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 FGD6Q6ZV73 1430 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
CACNA1C-210ENST00000399606 TOM1O60784 492 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 GGNBP2Q9H3C7 697 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
CACNA1C-210ENST00000399606 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 MNS1Q8NEH6 495 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 STARD3NLO95772 234 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
CACNA1C-210ENST00000399606 FEZ1Q99689 392 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms