RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
APTX-207ENST00000397172 MCM4P33991 863 aa12.53□□□□□ -0.4
APTX-207ENST00000397172 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
APTX-207ENST00000397172 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
APTX-207ENST00000397172 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
APTX-207ENST00000397172 NRXN3Q9Y4C0 1643 aa12.53□□□□□ -0.4
APTX-207ENST00000397172 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.41
APTX-207ENST00000397172 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
APTX-207ENST00000397172 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.41
APTX-207ENST00000397172 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
APTX-207ENST00000397172 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
APTX-207ENST00000397172 TRAK2O60296 914 aa12.51□□□□□ -0.41
APTX-207ENST00000397172 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
APTX-207ENST00000397172 ALKQ9UM73 1620 aa12.5□□□□□ -0.41
APTX-207ENST00000397172 NINLQ9Y2I6 1382 aa12.5□□□□□ -0.41
APTX-207ENST00000397172 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
APTX-207ENST00000397172 MSNP26038 577 aaKnown RBP12.5□□□□□ -0.41
APTX-207ENST00000397172 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
APTX-207ENST00000397172 LAMC1P11047 1609 aa12.49□□□□□ -0.41
APTX-207ENST00000397172 KCNA6P17658 529 aa12.49□□□□□ -0.41
APTX-207ENST00000397172 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
APTX-207ENST00000397172 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
APTX-207ENST00000397172 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
APTX-207ENST00000397172 RGS3P49796 1198 aa12.48□□□□□ -0.41
APTX-207ENST00000397172 METP08581 1390 aa12.48□□□□□ -0.41
APTX-207ENST00000397172 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
APTX-207ENST00000397172 PLIN1O60240 522 aa12.48□□□□□ -0.41
APTX-207ENST00000397172 OFD1O75665 1012 aa12.48□□□□□ -0.41
APTX-207ENST00000397172 UTP14CQ5TAP6 766 aaKnown RBP12.48□□□□□ -0.41
APTX-207ENST00000397172 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 NWD1Q149M9 1564 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 PDE4CQ08493 712 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
APTX-207ENST00000397172 RALGAPBQ86X10 1494 aa12.47□□□□□ -0.41
APTX-207ENST00000397172 CPS1P31327 1500 aa12.46□□□□□ -0.41
APTX-207ENST00000397172 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
APTX-207ENST00000397172 ZSCAN30Q86W11 494 aa12.46□□□□□ -0.41
APTX-207ENST00000397172 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
APTX-207ENST00000397172 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.41
APTX-207ENST00000397172 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
APTX-207ENST00000397172 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
APTX-207ENST00000397172 GBP4Q96PP9 640 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
APTX-207ENST00000397172 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
APTX-207ENST00000397172 DSG3P32926 999 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 PANK2Q9BZ23 570 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 CGNL1Q0VF96 1302 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
APTX-207ENST00000397172 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 ARXQ96QS3 562 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 TECPR2O15040 1411 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
APTX-207ENST00000397172 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 USP19O94966 1318 aa12.43□□□□□ -0.42
APTX-207ENST00000397172 DYNC1I1O14576 645 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
APTX-207ENST00000397172 STRCP1A6NGW2 1772 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 POTEHQ6S545 545 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
APTX-207ENST00000397172 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
APTX-207ENST00000397172 CIZ1Q9ULV3 898 aaPredicted RBP12.42□□□□□ -0.42
APTX-207ENST00000397172 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
APTX-207ENST00000397172 PPP1R9BQ96SB3 815 aa12.41□□□□□ -0.42
APTX-207ENST00000397172 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
APTX-207ENST00000397172 IQSEC2Q5JU85 1478 aa12.41□□□□□ -0.42
APTX-207ENST00000397172 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
APTX-207ENST00000397172 TRPM1Q7Z4N2 1603 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 MCM5P33992 734 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 GOLGA2Q08379 1002 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 HSCBQ8IWL3 235 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 DLC1Q96QB1 1528 aa12.4□□□□□ -0.42
APTX-207ENST00000397172 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.43
APTX-207ENST00000397172 PROSER2Q86WR7 435 aaPredicted RBP12.4□□□□□ -0.43
APTX-207ENST00000397172 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
APTX-207ENST00000397172 CAPN15O75808 1086 aa12.39□□□□□ -0.43
APTX-207ENST00000397172 KIF20AO95235 890 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 SKAP1Q86WV1 359 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
APTX-207ENST00000397172 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 ROBO2Q9HCK4 1378 aa12.38□□□□□ -0.43
APTX-207ENST00000397172 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms