RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 TEX35Q5T0J7 233 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 GNAI3P08754 354 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 HIP1O00291 1037 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 AK7Q96M32 723 aa14.78□□□□□ -0.04
KCNQ3-201ENST00000388996 EPRSP07814 1512 aaKnown RBP14.77□□□□□ -0.04
KCNQ3-201ENST00000388996 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.04
KCNQ3-201ENST00000388996 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
KCNQ3-201ENST00000388996 PDCP20941 246 aa14.77□□□□□ -0.05
KCNQ3-201ENST00000388996 PLEKHO1Q53GL0 409 aaPredicted RBP14.77□□□□□ -0.05
KCNQ3-201ENST00000388996 RUFY1Q96T51 708 aa14.77□□□□□ -0.05
KCNQ3-201ENST00000388996 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.05
KCNQ3-201ENST00000388996 ODF2Q5BJF6 829 aa14.76□□□□□ -0.05
KCNQ3-201ENST00000388996 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 CCDC141Q6ZP82 1450 aa14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 RDXP35241 583 aaKnown RBP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 KINO60870 393 aaKnown RBP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.05
KCNQ3-201ENST00000388996 CTTNBP2Q8WZ74 1663 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 ERBINQ96RT1 1412 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 MTHFSP49914 203 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 CLASRPQ8N2M8 674 aaKnown RBP14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 NASPP49321 788 aaPredicted RBP14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 OFD1O75665 1012 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 SNAPC4Q5SXM2 1469 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 ESCO1Q5FWF5 840 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 KRI1Q8N9T8 703 aaKnown RBP14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 ADAMTS8Q9UP79 889 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
KCNQ3-201ENST00000388996 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 ARGLU1Q9NWB6 273 aaPredicted RBP14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 POGZQ7Z3K3 1410 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 ACBD3Q9H3P7 528 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 CAGE1Q8TC20 777 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 MNS1Q8NEH6 495 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 NESP48681 1621 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 STRN4Q9NRL3 753 aa14.73□□□□□ -0.05
KCNQ3-201ENST00000388996 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 TXLNAP40222 546 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 RABEP1Q15276 862 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 TCP11L2Q8N4U5 519 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 ZNF771Q7L3S4 317 aaPredicted RBP14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 CDR1P51861 262 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 CDK5RAP3Q96JB5 506 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 CCDC39Q9UFE4 941 aa14.72□□□□□ -0.05
KCNQ3-201ENST00000388996 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 PDILTQ8N807 584 aa14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 PPP2R1AP30153 589 aa14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 GNAI2P04899 355 aa14.71□□□□□ -0.05
KCNQ3-201ENST00000388996 ZNF396Q96N95 335 aaPredicted RBP14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 TTC39AQ5SRH9 613 aa14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 PROSER2Q86WR7 435 aaPredicted RBP14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 MBD3O95983 291 aa14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 TMEM132AQ24JP5 1023 aa14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 ZNF530Q6P9A1 599 aaPredicted RBP14.7□□□□□ -0.06
KCNQ3-201ENST00000388996 CCT4P50991 539 aaKnown RBP14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 DAPK1P53355 1430 aa14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 MYO6Q9UM54 1294 aa14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 AFAP1Q8N556 730 aa14.69□□□□□ -0.06
KCNQ3-201ENST00000388996 SMC2O95347 1197 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 TATP17735 454 aaPredicted RBP14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 HDGFL1Q5TGJ6 251 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 HSP90B2PQ58FF3 399 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 RTEL1-TNFRSF6BF6WH68 1400 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 MCM2P49736 904 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
KCNQ3-201ENST00000388996 JMYQ8N9B5 988 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CCP110O43303 1012 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 HSP90AB2PQ58FF8 381 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 MAGEC2Q9UBF1 373 aaPredicted RBP14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 LETM1O95202 739 aaPredicted RBP14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CCAR1Q8IX12 1150 aaKnown RBP14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 TWISTNBQ3B726 338 aaPredicted RBP14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 FAM43AQ8N2R8 423 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 CDK19Q9BWU1 502 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 ANKRD30BQ9BXX2 1392 aa14.67□□□□□ -0.06
KCNQ3-201ENST00000388996 NOB1Q9ULX3 412 aaKnown RBP14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 TRIM5Q9C035 493 aa14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 FAM13BQ9NYF5 915 aa14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 NACAP1Q9BZK3 213 aa14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 KRT18P05783 430 aaKnown RBP14.66□□□□□ -0.06
KCNQ3-201ENST00000388996 STK38Q15208 465 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms