RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.2□□□□□ -0.14
NPHS1-202ENST00000378910 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
NPHS1-202ENST00000378910 RSPH14Q9UHP6 348 aa14.2□□□□□ -0.14
NPHS1-202ENST00000378910 EVC2Q86UK5 1308 aa14.2□□□□□ -0.14
NPHS1-202ENST00000378910 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
NPHS1-202ENST00000378910 SLC26A8Q96RN1 970 aa14.19□□□□□ -0.14
NPHS1-202ENST00000378910 MBD3O95983 291 aa14.19□□□□□ -0.14
NPHS1-202ENST00000378910 IGHDP01880 384 aa14.19□□□□□ -0.14
NPHS1-202ENST00000378910 IRX5P78411 483 aaPredicted RBP14.19□□□□□ -0.14
NPHS1-202ENST00000378910 RABEP1Q15276 862 aa14.19□□□□□ -0.14
NPHS1-202ENST00000378910 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
NPHS1-202ENST00000378910 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
NPHS1-202ENST00000378910 ANAPC15P60006 121 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.18□□□□□ -0.14
NPHS1-202ENST00000378910 ANO2Q9NQ90 1003 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 LRCH2Q5VUJ6 765 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
NPHS1-202ENST00000378910 CCDC91Q7Z6B0 441 aa14.17□□□□□ -0.14
NPHS1-202ENST00000378910 GIMAP7Q8NHV1 300 aa14.17□□□□□ -0.14
NPHS1-202ENST00000378910 CFAP70Q5T0N1 1121 aa14.17□□□□□ -0.14
NPHS1-202ENST00000378910 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
NPHS1-202ENST00000378910 ATF7IPQ6VMQ6 1270 aa14.16□□□□□ -0.14
NPHS1-202ENST00000378910 NOB1Q9ULX3 412 aaKnown RBP14.16□□□□□ -0.14
NPHS1-202ENST00000378910 NKTRP30414 1462 aaKnown RBP14.16□□□□□ -0.14
NPHS1-202ENST00000378910 ABCC5O15440 1437 aa14.16□□□□□ -0.14
NPHS1-202ENST00000378910 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
NPHS1-202ENST00000378910 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPHS1-202ENST00000378910 CT47A1Q5JQC4 288 aaPredicted RBP14.16□□□□□ -0.14
NPHS1-202ENST00000378910 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
NPHS1-202ENST00000378910 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
NPHS1-202ENST00000378910 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
NPHS1-202ENST00000378910 RARSP54136 660 aaKnown RBP14.15□□□□□ -0.14
NPHS1-202ENST00000378910 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.14
NPHS1-202ENST00000378910 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
NPHS1-202ENST00000378910 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
NPHS1-202ENST00000378910 GCC1Q96CN9 775 aa14.15□□□□□ -0.14
NPHS1-202ENST00000378910 MPNDQ8N594 471 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 TNPO1Q92973 898 aaKnown RBP14.14□□□□□ -0.15
NPHS1-202ENST00000378910 CHMP3Q9Y3E7 222 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
NPHS1-202ENST00000378910 USP8P40818 1118 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
NPHS1-202ENST00000378910 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 NEK4P51957 841 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 PRIMPOLQ96LW4 560 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 TSPY26PQ9H489 355 aa14.14□□□□□ -0.15
NPHS1-202ENST00000378910 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
NPHS1-202ENST00000378910 GABPB1Q06547 395 aaPredicted RBP14.13□□□□□ -0.15
NPHS1-202ENST00000378910 GOLGA6L19H0YKK7 550 aa14.13□□□□□ -0.15
NPHS1-202ENST00000378910 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
NPHS1-202ENST00000378910 C10orf67Q8IYJ2 551 aa14.13□□□□□ -0.15
NPHS1-202ENST00000378910 DRC1Q96MC2 740 aa14.13□□□□□ -0.15
NPHS1-202ENST00000378910 GEMIN8Q9NWZ8 242 aaKnown RBP14.13□□□□□ -0.15
NPHS1-202ENST00000378910 CEP83Q9Y592 693 aa14.13□□□□□ -0.15
NPHS1-202ENST00000378910 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
NPHS1-202ENST00000378910 ZSCAN20P17040 1043 aaPredicted RBP14.12□□□□□ -0.15
NPHS1-202ENST00000378910 GNAI1P63096 354 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 PIK3R5Q8WYR1 880 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
NPHS1-202ENST00000378910 SLC12A5Q9H2X9 1139 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 FEZ1Q99689 392 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 CWC22Q9HCG8 908 aaKnown RBP14.12□□□□□ -0.15
NPHS1-202ENST00000378910 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 PTPRGP23470 1445 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 KCNG1Q9UIX4 513 aa14.12□□□□□ -0.15
NPHS1-202ENST00000378910 BECN2A8MW95 431 aa14.11□□□□□ -0.15
NPHS1-202ENST00000378910 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
NPHS1-202ENST00000378910 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
NPHS1-202ENST00000378910 MCM5P33992 734 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
NPHS1-202ENST00000378910 CEP120Q8N960 986 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 SMC3Q9UQE7 1217 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 TPM4P67936 248 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 LEKR1Q6ZMV7 388 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 GPATCH3Q96I76 525 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 OGFRQ9NZT2 677 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
NPHS1-202ENST00000378910 ZNF853P0CG23 659 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 LIG1P18858 919 aa14.1□□□□□ -0.15
NPHS1-202ENST00000378910 HMOX1P09601 288 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 SSFA2P28290 1259 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 CCDC172P0C7W6 258 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 SATB1Q01826 763 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
NPHS1-202ENST00000378910 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.15
NPHS1-202ENST00000378910 KRT222Q8N1A0 295 aa14.08□□□□□ -0.15
NPHS1-202ENST00000378910 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
NPHS1-202ENST00000378910 HMGXB3Q12766 1538 aa14.08□□□□□ -0.16
NPHS1-202ENST00000378910 SEC24BO95487 1268 aa14.08□□□□□ -0.16
NPHS1-202ENST00000378910 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
NPHS1-202ENST00000378910 AK7Q96M32 723 aa14.08□□□□□ -0.16
NPHS1-202ENST00000378910 MCM2P49736 904 aa14.07□□□□□ -0.16
NPHS1-202ENST00000378910 YY1AP1Q9H869 796 aa14.07□□□□□ -0.16
NPHS1-202ENST00000378910 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
NPHS1-202ENST00000378910 SYCE3A1L190 88 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms