RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 CTNNA3Q9UI47 895 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
DMD-209ENST00000378702 TERF2Q15554 542 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 CDCA8Q53HL2 280 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 CALCOCO1Q9P1Z2 691 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 SYCP1Q15431 976 aa12.59□□□□□ -0.39
DMD-209ENST00000378702 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
DMD-209ENST00000378702 DDX41Q9UJV9 622 aaKnown RBP12.59□□□□□ -0.39
DMD-209ENST00000378702 SYNMO15061 1565 aa12.59□□□□□ -0.39
DMD-209ENST00000378702 CFAP74Q9C0B2 1584 aa12.59□□□□□ -0.39
DMD-209ENST00000378702 WDR62O43379 1518 aa12.59□□□□□ -0.39
DMD-209ENST00000378702 ANKRD50Q9ULJ7 1429 aa12.59□□□□□ -0.39
DMD-209ENST00000378702 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
DMD-209ENST00000378702 MBD3O95983 291 aa12.58□□□□□ -0.39
DMD-209ENST00000378702 TSPY26PQ9H489 355 aa12.58□□□□□ -0.39
DMD-209ENST00000378702 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
DMD-209ENST00000378702 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.4
DMD-209ENST00000378702 MORC2Q9Y6X9 1032 aaPredicted RBP12.58□□□□□ -0.4
DMD-209ENST00000378702 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
DMD-209ENST00000378702 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
DMD-209ENST00000378702 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 NUP155O75694 1391 aa12.57□□□□□ -0.4
DMD-209ENST00000378702 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 UVSSAQ2YD98 709 aa12.57□□□□□ -0.4
DMD-209ENST00000378702 TTC12Q9H892 705 aaPredicted RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 FAM193AP78312 1265 aa12.57□□□□□ -0.4
DMD-209ENST00000378702 PKP1Q13835 747 aa12.57□□□□□ -0.4
DMD-209ENST00000378702 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
DMD-209ENST00000378702 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 NUCB1Q02818 461 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 YY1AP1Q9H869 796 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 PTPRGP23470 1445 aa12.56□□□□□ -0.4
DMD-209ENST00000378702 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
DMD-209ENST00000378702 KANK1Q14678 1352 aa12.55□□□□□ -0.4
DMD-209ENST00000378702 CREBRFQ8IUR6 639 aa12.55□□□□□ -0.4
DMD-209ENST00000378702 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
DMD-209ENST00000378702 UHRF1BP1LA0JNW5 1464 aa12.55□□□□□ -0.4
DMD-209ENST00000378702 RABEP1Q15276 862 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 KIAA1524Q8TCG1 905 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 ZDHHC9Q9Y397 364 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 RNF17Q9BXT8 1623 aaKnown RBP12.54□□□□□ -0.4
DMD-209ENST00000378702 MMP14P50281 582 aa12.54□□□□□ -0.4
DMD-209ENST00000378702 CCDC141Q6ZP82 1450 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
DMD-209ENST00000378702 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
DMD-209ENST00000378702 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 A2MP01023 1474 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
DMD-209ENST00000378702 NUP160Q12769 1436 aa12.52□□□□□ -0.4
DMD-209ENST00000378702 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.4
DMD-209ENST00000378702 MPNDQ8N594 471 aa12.52□□□□□ -0.4
DMD-209ENST00000378702 DDX19BQ9UMR2 479 aa12.52□□□□□ -0.4
DMD-209ENST00000378702 ADCY10Q96PN6 1610 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 MYOM1P52179 1685 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 PBRM1Q86U86 1689 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 WDR63Q8IWG1 891 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
DMD-209ENST00000378702 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 FEZ2Q9UHY8 353 aaPredicted RBP12.52□□□□□ -0.41
DMD-209ENST00000378702 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 REREQ9P2R6 1566 aa12.52□□□□□ -0.41
DMD-209ENST00000378702 ADCY5O95622 1261 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 GEMIN8Q9NWZ8 242 aaKnown RBP12.51□□□□□ -0.41
DMD-209ENST00000378702 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 CADPSQ9ULU8 1353 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 PHF14O94880 888 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 CHD1LQ86WJ1 897 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 FAM53CQ9NYF3 392 aa12.51□□□□□ -0.41
DMD-209ENST00000378702 SCAF11Q99590 1463 aaKnown RBP12.49□□□□□ -0.41
DMD-209ENST00000378702 TPM3P06753 285 aa12.49□□□□□ -0.41
DMD-209ENST00000378702 PYCARDQ9ULZ3 195 aa12.49□□□□□ -0.41
DMD-209ENST00000378702 SHPRHQ149N8 1683 aa12.49□□□□□ -0.41
DMD-209ENST00000378702 ERICH4A6NGS2 130 aa12.48□□□□□ -0.41
DMD-209ENST00000378702 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
DMD-209ENST00000378702 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
DMD-209ENST00000378702 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
DMD-209ENST00000378702 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
DMD-209ENST00000378702 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
DMD-209ENST00000378702 ZGPATQ8N5A5 531 aaKnown RBP12.48□□□□□ -0.41
DMD-209ENST00000378702 SOX12O15370 315 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 SHANK2Q9UPX8 1470 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 TRIM27P14373 513 aa12.47□□□□□ -0.41
DMD-209ENST00000378702 CT47B1P0C2W7 299 aaPredicted RBP12.46□□□□□ -0.41
DMD-209ENST00000378702 PSEN1P49768 467 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms