RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 NUP155O75694 1391 aa14.87□□□□□ -0.03
CFTRP3-201ENST00000376400 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.87□□□□□ -0.03
CFTRP3-201ENST00000376400 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
CFTRP3-201ENST00000376400 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
CFTRP3-201ENST00000376400 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
CFTRP3-201ENST00000376400 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.86□□□□□ -0.03
CFTRP3-201ENST00000376400 COL16A1Q07092 1604 aaPredicted RBP14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 NCOA3Q9Y6Q9 1424 aa14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 PDE4AP27815 886 aa14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 DOK7Q18PE1 504 aa14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
CFTRP3-201ENST00000376400 XRN1Q8IZH2 1706 aaKnown RBP14.84□□□□□ -0.03
CFTRP3-201ENST00000376400 TRPM2O94759 1503 aa14.84□□□□□ -0.03
CFTRP3-201ENST00000376400 ITGAEP38570 1179 aa14.84□□□□□ -0.03
CFTRP3-201ENST00000376400 SLAIN2Q9P270 581 aa14.84□□□□□ -0.03
CFTRP3-201ENST00000376400 PTPRUQ92729 1446 aa14.83□□□□□ -0.03
CFTRP3-201ENST00000376400 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.04
CFTRP3-201ENST00000376400 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
CFTRP3-201ENST00000376400 CRISPLD2Q9H0B8 497 aa14.83□□□□□ -0.04
CFTRP3-201ENST00000376400 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
CFTRP3-201ENST00000376400 HOXB3P14651 431 aaPredicted RBP14.81□□□□□ -0.04
CFTRP3-201ENST00000376400 FOXK1P85037 733 aa14.81□□□□□ -0.04
CFTRP3-201ENST00000376400 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
CFTRP3-201ENST00000376400 RRBP1Q9P2E9 1410 aaKnown RBP14.81□□□□□ -0.04
CFTRP3-201ENST00000376400 AHDC1Q5TGY3 1603 aaPredicted RBP14.81□□□□□ -0.04
CFTRP3-201ENST00000376400 ST18O60284 1047 aa14.8□□□□□ -0.04
CFTRP3-201ENST00000376400 ZNF710Q8N1W2 664 aa14.8□□□□□ -0.04
CFTRP3-201ENST00000376400 RIMBP2O15034 1052 aa14.79□□□□□ -0.04
CFTRP3-201ENST00000376400 NEXMIFQ5QGS0 1516 aa14.79□□□□□ -0.04
CFTRP3-201ENST00000376400 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
CFTRP3-201ENST00000376400 JCADQ9P266 1359 aa14.79□□□□□ -0.04
CFTRP3-201ENST00000376400 KIF1BO60333 1816 aa14.78□□□□□ -0.04
CFTRP3-201ENST00000376400 SHPRHQ149N8 1683 aa14.78□□□□□ -0.04
CFTRP3-201ENST00000376400 NAIPQ13075 1403 aa14.78□□□□□ -0.04
CFTRP3-201ENST00000376400 DSG2Q14126 1118 aa14.78□□□□□ -0.04
CFTRP3-201ENST00000376400 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
CFTRP3-201ENST00000376400 LARP6Q9BRS8 491 aaKnown RBP14.77□□□□□ -0.05
CFTRP3-201ENST00000376400 C19orf44Q9H6X5 657 aa14.77□□□□□ -0.05
CFTRP3-201ENST00000376400 AMOTL2Q9Y2J4 779 aa14.77□□□□□ -0.05
CFTRP3-201ENST00000376400 LRP6O75581 1613 aa14.77□□□□□ -0.05
CFTRP3-201ENST00000376400 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
CFTRP3-201ENST00000376400 DCCP43146 1447 aa14.75□□□□□ -0.05
CFTRP3-201ENST00000376400 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
CFTRP3-201ENST00000376400 LCE2DQ5TA82 110 aaPredicted RBP14.75□□□□□ -0.05
CFTRP3-201ENST00000376400 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
CFTRP3-201ENST00000376400 NALCNQ8IZF0 1738 aa14.75□□□□□ -0.05
CFTRP3-201ENST00000376400 METP08581 1390 aa14.74□□□□□ -0.05
CFTRP3-201ENST00000376400 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
CFTRP3-201ENST00000376400 ATF3P18847 181 aa14.73□□□□□ -0.05
CFTRP3-201ENST00000376400 PPP1R15BQ5SWA1 713 aa14.73□□□□□ -0.05
CFTRP3-201ENST00000376400 DDX27Q96GQ7 796 aaKnown RBP14.73□□□□□ -0.05
CFTRP3-201ENST00000376400 ASXL1Q8IXJ9 1541 aa14.72□□□□□ -0.05
CFTRP3-201ENST00000376400 MST1RQ04912 1400 aa14.72□□□□□ -0.05
CFTRP3-201ENST00000376400 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.05
CFTRP3-201ENST00000376400 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
CFTRP3-201ENST00000376400 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
CFTRP3-201ENST00000376400 HFM1A2PYH4 1435 aa14.71□□□□□ -0.05
CFTRP3-201ENST00000376400 SPATA31A6Q5VVP1 1343 aa14.7□□□□□ -0.06
CFTRP3-201ENST00000376400 ADGRL3Q9HAR2 1447 aa14.7□□□□□ -0.06
CFTRP3-201ENST00000376400 PPLO60437 1756 aa14.7□□□□□ -0.06
CFTRP3-201ENST00000376400 SLC34A2O95436 690 aa14.69□□□□□ -0.06
CFTRP3-201ENST00000376400 TSHZ2Q9NRE2 1034 aa14.69□□□□□ -0.06
CFTRP3-201ENST00000376400 MFSD10Q14728 455 aa14.68□□□□□ -0.06
CFTRP3-201ENST00000376400 PRAG1Q86YV5 1406 aa14.66□□□□□ -0.06
CFTRP3-201ENST00000376400 SETD5Q9C0A6 1442 aa14.66□□□□□ -0.06
CFTRP3-201ENST00000376400 LAMC1P11047 1609 aa14.66□□□□□ -0.06
CFTRP3-201ENST00000376400 HOXB1P14653 301 aaPredicted RBP14.66□□□□□ -0.06
CFTRP3-201ENST00000376400 PTCH1Q13635 1447 aa14.66□□□□□ -0.06
CFTRP3-201ENST00000376400 POTEMA6NI47 508 aa14.64□□□□□ -0.07
CFTRP3-201ENST00000376400 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
CFTRP3-201ENST00000376400 ARSIQ5FYB1 569 aa14.63□□□□□ -0.07
CFTRP3-201ENST00000376400 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
CFTRP3-201ENST00000376400 MARVELD3Q96A59 401 aa14.63□□□□□ -0.07
CFTRP3-201ENST00000376400 ROBO2Q9HCK4 1378 aa14.62□□□□□ -0.07
CFTRP3-201ENST00000376400 WDR70Q9NW82 654 aa14.62□□□□□ -0.07
CFTRP3-201ENST00000376400 IFT172Q9UG01 1749 aa14.62□□□□□ -0.07
CFTRP3-201ENST00000376400 PCDHGA4Q9Y5G9 962 aa14.62□□□□□ -0.07
CFTRP3-201ENST00000376400 EMP3P54852 163 aa14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 MEX3CQ5U5Q3 659 aaKnown RBP14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 PTCD2Q8WV60 388 aaKnown RBP14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 C1orf167Q5SNV9 1468 aa14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
CFTRP3-201ENST00000376400 TBC1D12O60347 775 aa14.6□□□□□ -0.07
CFTRP3-201ENST00000376400 DDX17Q92841 729 aaKnown RBP14.6□□□□□ -0.07
CFTRP3-201ENST00000376400 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
CFTRP3-201ENST00000376400 NUTM2BA6NNL0 878 aaPredicted RBP14.58□□□□□ -0.08
CFTRP3-201ENST00000376400 NUTM2EB1AL46 878 aaPredicted RBP14.58□□□□□ -0.08
CFTRP3-201ENST00000376400 HAP1P54257 671 aaPredicted RBP14.58□□□□□ -0.08
CFTRP3-201ENST00000376400 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.08
CFTRP3-201ENST00000376400 LRRC59Q96AG4 307 aaKnown RBP14.58□□□□□ -0.08
CFTRP3-201ENST00000376400 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
CFTRP3-201ENST00000376400 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.08
CFTRP3-201ENST00000376400 SPATA31E1Q6ZUB1 1445 aa14.57□□□□□ -0.08
CFTRP3-201ENST00000376400 CDC42BPGQ6DT37 1551 aa14.56□□□□□ -0.08
CFTRP3-201ENST00000376400 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
CFTRP3-201ENST00000376400 KNDC1Q76NI1 1749 aa14.55□□□□□ -0.08
CFTRP3-201ENST00000376400 AFF2P51816 1311 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms