RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
TRAPPC3-203ENST00000373163 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
TRAPPC3-203ENST00000373163 APBA3O96018 575 aa23.54■■□□□ 1.36
TRAPPC3-203ENST00000373163 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
TRAPPC3-203ENST00000373163 PRDM11Q9NQV5 511 aa23.53■■□□□ 1.36
TRAPPC3-203ENST00000373163 TRPM3Q9HCF6 1732 aaPredicted RBP23.51■■□□□ 1.35
TRAPPC3-203ENST00000373163 SPATA31A1Q5TZJ5 1347 aa23.51■■□□□ 1.35
TRAPPC3-203ENST00000373163 CFAP70Q5T0N1 1121 aa23.5■■□□□ 1.35
TRAPPC3-203ENST00000373163 POGKQ9P215 609 aa23.5■■□□□ 1.35
TRAPPC3-203ENST00000373163 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
TRAPPC3-203ENST00000373163 ALS2Q96Q42 1657 aa23.49■■□□□ 1.35
TRAPPC3-203ENST00000373163 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
TRAPPC3-203ENST00000373163 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
TRAPPC3-203ENST00000373163 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC3-203ENST00000373163 DCAF8L1A6NGE4 600 aa23.47■■□□□ 1.35
TRAPPC3-203ENST00000373163 SPON1Q9HCB6 807 aa23.46■■□□□ 1.35
TRAPPC3-203ENST00000373163 STRN4Q9NRL3 753 aa23.46■■□□□ 1.35
TRAPPC3-203ENST00000373163 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC3-203ENST00000373163 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
TRAPPC3-203ENST00000373163 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
TRAPPC3-203ENST00000373163 KIAA0232Q92628 1395 aa23.44■■□□□ 1.34
TRAPPC3-203ENST00000373163 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
TRAPPC3-203ENST00000373163 NINLQ9Y2I6 1382 aa23.43■■□□□ 1.34
TRAPPC3-203ENST00000373163 PRR36Q9H6K5 1346 aa23.43■■□□□ 1.34
TRAPPC3-203ENST00000373163 PDE3BQ13370 1112 aa23.43■■□□□ 1.34
TRAPPC3-203ENST00000373163 CHRNA2Q15822 529 aa23.43■■□□□ 1.34
TRAPPC3-203ENST00000373163 MPHOSPH9Q99550 1183 aa23.43■■□□□ 1.34
TRAPPC3-203ENST00000373163 RREB1Q92766 1687 aa23.42■■□□□ 1.34
TRAPPC3-203ENST00000373163 KCNQ2O43526 872 aa23.42■■□□□ 1.34
TRAPPC3-203ENST00000373163 NGDNQ8NEJ9 315 aaKnown RBP23.42■■□□□ 1.34
TRAPPC3-203ENST00000373163 USP35Q9P2H5 1018 aa23.42■■□□□ 1.34
TRAPPC3-203ENST00000373163 CRYBG1Q9Y4K1 1723 aa23.41■■□□□ 1.34
TRAPPC3-203ENST00000373163 NUP188Q5SRE5 1749 aa23.4■■□□□ 1.34
TRAPPC3-203ENST00000373163 BARGINQ6ZT62 677 aa23.4■■□□□ 1.34
TRAPPC3-203ENST00000373163 TULP4Q9NRJ4 1543 aa23.39■■□□□ 1.34
TRAPPC3-203ENST00000373163 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
TRAPPC3-203ENST00000373163 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC3-203ENST00000373163 EVA1CP58658 441 aa23.36■■□□□ 1.33
TRAPPC3-203ENST00000373163 ZC3H6P61129 1189 aaKnown RBP23.36■■□□□ 1.33
TRAPPC3-203ENST00000373163 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
TRAPPC3-203ENST00000373163 SSH2Q76I76 1423 aa23.35■■□□□ 1.33
TRAPPC3-203ENST00000373163 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
TRAPPC3-203ENST00000373163 LARP1Q6PKG0 1096 aaKnown RBP23.32■■□□□ 1.32
TRAPPC3-203ENST00000373163 TCP11L2Q8N4U5 519 aa23.32■■□□□ 1.32
TRAPPC3-203ENST00000373163 ATP7BP35670 1465 aa23.3■■□□□ 1.32
TRAPPC3-203ENST00000373163 NUTM2GQ5VZR2 741 aa23.3■■□□□ 1.32
TRAPPC3-203ENST00000373163 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
TRAPPC3-203ENST00000373163 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC3-203ENST00000373163 THRAP3Q9Y2W1 955 aaKnown RBP23.27■■□□□ 1.32
TRAPPC3-203ENST00000373163 CAMTA1Q9Y6Y1 1673 aa23.27■■□□□ 1.32
TRAPPC3-203ENST00000373163 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC3-203ENST00000373163 NUDT16Q96DE0 195 aaKnown RBP23.25■■□□□ 1.31
TRAPPC3-203ENST00000373163 ANO8Q9HCE9 1232 aaPredicted RBP23.24■■□□□ 1.31
TRAPPC3-203ENST00000373163 CPDO75976 1380 aa23.23■■□□□ 1.31
TRAPPC3-203ENST00000373163 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
TRAPPC3-203ENST00000373163 PLSCR1O15162 318 aa23.22■■□□□ 1.31
TRAPPC3-203ENST00000373163 OVOS2A0A0G2JMS6 1433 aa23.22■■□□□ 1.31
TRAPPC3-203ENST00000373163 OVOS2A0A0J9YW53 1432 aa23.22■■□□□ 1.31
TRAPPC3-203ENST00000373163 OVOS2Q6IE36 1432 aa23.22■■□□□ 1.31
TRAPPC3-203ENST00000373163 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
TRAPPC3-203ENST00000373163 POLR3AO14802 1390 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC3-203ENST00000373163 ZBTB7AO95365 584 aa23.2■■□□□ 1.3
TRAPPC3-203ENST00000373163 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC3-203ENST00000373163 LMO7Q8WWI1 1683 aa23.19■■□□□ 1.3
TRAPPC3-203ENST00000373163 ACEP12821 1306 aa23.19■■□□□ 1.3
TRAPPC3-203ENST00000373163 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
TRAPPC3-203ENST00000373163 ITSN1Q15811 1721 aa23.19■■□□□ 1.3
TRAPPC3-203ENST00000373163 CASZ1Q86V15 1759 aa23.18■■□□□ 1.3
TRAPPC3-203ENST00000373163 PARP4Q9UKK3 1724 aaKnown RBP23.18■■□□□ 1.3
TRAPPC3-203ENST00000373163 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 USP19O94966 1318 aa23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 PTGER2P43116 358 aa23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 BCL11BQ9C0K0 894 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 RGPD3A6NKT7 1758 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 RGPD4Q7Z3J3 1758 aa23.17■■□□□ 1.3
TRAPPC3-203ENST00000373163 KDM2AQ9Y2K7 1162 aa23.16■■□□□ 1.3
TRAPPC3-203ENST00000373163 CRB1P82279 1406 aa23.16■■□□□ 1.3
TRAPPC3-203ENST00000373163 CDK19Q9BWU1 502 aa23.15■■□□□ 1.3
TRAPPC3-203ENST00000373163 PEAK1Q9H792 1746 aa23.15■■□□□ 1.3
TRAPPC3-203ENST00000373163 MYOM1P52179 1685 aa23.14■■□□□ 1.29
TRAPPC3-203ENST00000373163 GCP02774 474 aa23.14■■□□□ 1.29
TRAPPC3-203ENST00000373163 C1QTNF8P60827 252 aa23.14■■□□□ 1.29
TRAPPC3-203ENST00000373163 ATF5Q9Y2D1 282 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC3-203ENST00000373163 DDB1Q16531 1140 aa23.13■■□□□ 1.29
TRAPPC3-203ENST00000373163 PTF1AQ7RTS3 328 aa23.13■■□□□ 1.29
TRAPPC3-203ENST00000373163 SYT17Q9BSW7 474 aa23.13■■□□□ 1.29
TRAPPC3-203ENST00000373163 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-203ENST00000373163 CCDC61Q9Y6R9 512 aa23.13■■□□□ 1.29
TRAPPC3-203ENST00000373163 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
TRAPPC3-203ENST00000373163 PROM2Q8N271 834 aa23.12■■□□□ 1.29
TRAPPC3-203ENST00000373163 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
TRAPPC3-203ENST00000373163 PLEKHG3A1L390 1219 aa23.11■■□□□ 1.29
TRAPPC3-203ENST00000373163 LRRC37A3O60309 1634 aa23.09■■□□□ 1.29
TRAPPC3-203ENST00000373163 STK32BQ9NY57 414 aa23.09■■□□□ 1.29
TRAPPC3-203ENST00000373163 ZBTB7CA1YPR0 619 aa23.08■■□□□ 1.29
TRAPPC3-203ENST00000373163 IFFO2Q5TF58 517 aa23.08■■□□□ 1.29
TRAPPC3-203ENST00000373163 TOPAZ1Q8N9V7 1692 aa23.08■■□□□ 1.29
TRAPPC3-203ENST00000373163 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
TRAPPC3-203ENST00000373163 SLC15A2Q16348 729 aa23.06■■□□□ 1.28
TRAPPC3-203ENST00000373163 TOM1L2Q6ZVM7 507 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms