RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 GSE1Q14687 1217 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 AK7Q96M32 723 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 SYNJ2O15056 1496 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
TRERF1-204ENST00000372922 DNAJC2Q99543 621 aaKnown RBP11.84□□□□□ -0.51
TRERF1-204ENST00000372922 TNNT1P13805 278 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 MTHFSP49914 203 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 CABP4P57796 275 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRERF1-204ENST00000372922 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
TRERF1-204ENST00000372922 TXLNAP40222 546 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
TRERF1-204ENST00000372922 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 PNISRQ8TF01 805 aaKnown RBP11.83□□□□□ -0.52
TRERF1-204ENST00000372922 IGF1RP08069 1367 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
TRERF1-204ENST00000372922 ACBD3Q9H3P7 528 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
TRERF1-204ENST00000372922 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
TRERF1-204ENST00000372922 SDF4Q9BRK5 362 aa11.82□□□□□ -0.52
TRERF1-204ENST00000372922 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
TRERF1-204ENST00000372922 GPATCH11Q8N954 259 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 MYO6Q9UM54 1294 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 KIF7Q2M1P5 1343 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 GNAI2P04899 355 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 H0YHG0 523 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 NUTM2BA6NNL0 878 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 NUTM2EB1AL46 878 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 NUTM2AQ8IVF1 878 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 MNS1Q8NEH6 495 aa11.81□□□□□ -0.52
TRERF1-204ENST00000372922 MAGEC2Q9UBF1 373 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-204ENST00000372922 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-204ENST00000372922 WDR70Q9NW82 654 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-204ENST00000372922 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 PDILTQ8N807 584 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 KRT18P05783 430 aaKnown RBP11.8□□□□□ -0.52
TRERF1-204ENST00000372922 PDCP20941 246 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 CCDC66A2RUB6 948 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 NACAP1Q9BZK3 213 aa11.8□□□□□ -0.52
TRERF1-204ENST00000372922 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 PLEKHH2Q8IVE3 1493 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 MCM2P49736 904 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 SYCP1Q15431 976 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 AFAP1Q8N556 730 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 ZNF396Q96N95 335 aaPredicted RBP11.79□□□□□ -0.52
TRERF1-204ENST00000372922 IFT57Q9NWB7 429 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 FILIP1LQ4L180 1135 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
TRERF1-204ENST00000372922 KDM4AO75164 1064 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 ATP2B2Q01814 1243 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 CFAP70Q5T0N1 1121 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 ANKLE2Q86XL3 938 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 TCP11L2Q8N4U5 519 aa11.79□□□□□ -0.52
TRERF1-204ENST00000372922 DDX54Q8TDD1 881 aaKnown RBP11.79□□□□□ -0.52
TRERF1-204ENST00000372922 PIP4K2AP48426 406 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-204ENST00000372922 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 PAF1Q8N7H5 531 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 CDK19Q9BWU1 502 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 NCOA2Q15596 1464 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 HDGFL1Q5TGJ6 251 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 LRRC9Q6ZRR7 1453 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
TRERF1-204ENST00000372922 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
TRERF1-204ENST00000372922 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
TRERF1-204ENST00000372922 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
TRERF1-204ENST00000372922 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.52
TRERF1-204ENST00000372922 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.52
TRERF1-204ENST00000372922 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.53
TRERF1-204ENST00000372922 GCC1Q96CN9 775 aa11.77□□□□□ -0.53
TRERF1-204ENST00000372922 KIF21BO75037 1637 aa11.77□□□□□ -0.53
TRERF1-204ENST00000372922 HFM1A2PYH4 1435 aa11.77□□□□□ -0.53
TRERF1-204ENST00000372922 RBM5P52756 815 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRERF1-204ENST00000372922 CCDC191Q8NCU4 936 aa11.77□□□□□ -0.53
TRERF1-204ENST00000372922 ATP2B1P20020 1258 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 CCDC57Q2TAC2 916 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-204ENST00000372922 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
TRERF1-204ENST00000372922 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms