RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 SULT6B1Q6IMI4 303 aa9.22□□□□□ -0.93
ABCD3-202ENST00000370214 TBC1D32Q96NH3 1257 aa9.22□□□□□ -0.93
ABCD3-202ENST00000370214 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
ABCD3-202ENST00000370214 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.93
ABCD3-202ENST00000370214 E9PCH4 1651 aa9.21□□□□□ -0.94
ABCD3-202ENST00000370214 LMOD2Q6P5Q4 547 aa9.21□□□□□ -0.94
ABCD3-202ENST00000370214 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
ABCD3-202ENST00000370214 POLKQ9UBT6 870 aa9.21□□□□□ -0.94
ABCD3-202ENST00000370214 PREX2Q70Z35 1606 aa9.2□□□□□ -0.94
ABCD3-202ENST00000370214 TRAK2O60296 914 aa9.2□□□□□ -0.94
ABCD3-202ENST00000370214 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
ABCD3-202ENST00000370214 PIK3C2GO75747 1445 aa9.2□□□□□ -0.94
ABCD3-202ENST00000370214 CD109Q6YHK3 1445 aa9.2□□□□□ -0.94
ABCD3-202ENST00000370214 CLTCL1P53675 1640 aa9.2□□□□□ -0.94
ABCD3-202ENST00000370214 MAP4K4O95819 1239 aaPredicted RBP9.2□□□□□ -0.94
ABCD3-202ENST00000370214 MBIPQ9NS73 344 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 NPATQ14207 1427 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 CHD1O14646 1710 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 GOLGA6L3A6NEY3 463 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 CHD1LQ86WJ1 897 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 RRAGDQ9NQL2 400 aaPredicted RBP9.19□□□□□ -0.94
ABCD3-202ENST00000370214 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 UNC13BO14795 1591 aa9.19□□□□□ -0.94
ABCD3-202ENST00000370214 IPO8O15397 1037 aaKnown RBP9.18□□□□□ -0.94
ABCD3-202ENST00000370214 MCM4P33991 863 aa9.18□□□□□ -0.94
ABCD3-202ENST00000370214 HSP90AB2PQ58FF8 381 aa9.18□□□□□ -0.94
ABCD3-202ENST00000370214 POLR3AO14802 1390 aaPredicted RBP9.18□□□□□ -0.94
ABCD3-202ENST00000370214 XRCC6P12956 609 aaKnown RBP eCLIP9.18□□□□□ -0.94
ABCD3-202ENST00000370214 USHBP1Q8N6Y0 703 aa9.18□□□□□ -0.94
ABCD3-202ENST00000370214 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
ABCD3-202ENST00000370214 SYNMO15061 1565 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 SSFA2P28290 1259 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
ABCD3-202ENST00000370214 PLXNC1O60486 1568 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 COG3Q96JB2 828 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 EXOC6BQ9Y2D4 811 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 ZBTB40Q9NUA8 1239 aa9.17□□□□□ -0.94
ABCD3-202ENST00000370214 MYO5CQ9NQX4 1742 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 EIF2S2P20042 333 aaKnown RBP9.16□□□□□ -0.94
ABCD3-202ENST00000370214 PKP1Q13835 747 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 TBC1D9Q6ZT07 1266 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 RILPL2Q969X0 211 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 VAMP4O75379 141 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 SLC4A2P04920 1241 aa9.16□□□□□ -0.94
ABCD3-202ENST00000370214 ANXA1P04083 346 aa9.15□□□□□ -0.94
ABCD3-202ENST00000370214 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.94
ABCD3-202ENST00000370214 TNPO1Q92973 898 aaKnown RBP9.15□□□□□ -0.94
ABCD3-202ENST00000370214 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
ABCD3-202ENST00000370214 TRIM6-TRIM34B2RNG4 842 aa9.15□□□□□ -0.94
ABCD3-202ENST00000370214 ATP7AQ04656 1500 aa9.15□□□□□ -0.94
ABCD3-202ENST00000370214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.95
ABCD3-202ENST00000370214 XPCQ01831 940 aaPredicted RBP9.15□□□□□ -0.95
ABCD3-202ENST00000370214 MCTP1Q6DN14 999 aa9.15□□□□□ -0.95
ABCD3-202ENST00000370214 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.95
ABCD3-202ENST00000370214 MEIS3Q99687 375 aa9.15□□□□□ -0.95
ABCD3-202ENST00000370214 G2E3Q7L622 706 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 ANTXR1Q9H6X2 564 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 CHMP5Q9NZZ3 219 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 YEATS2Q9ULM3 1422 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 ABCC1P33527 1531 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 ZCCHC11Q5TAX3 1644 aaKnown RBP9.14□□□□□ -0.95
ABCD3-202ENST00000370214 MADDQ8WXG6 1647 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 NEURL4Q96JN8 1562 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 RNF214Q8ND24 703 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
ABCD3-202ENST00000370214 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 IL1RAPL2Q9NP60 686 aa9.14□□□□□ -0.95
ABCD3-202ENST00000370214 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 IQGAP3Q86VI3 1631 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
ABCD3-202ENST00000370214 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 NFE2L2Q16236 605 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 GAS2L3Q86XJ1 694 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 DDX49Q9Y6V7 483 aaKnown RBP9.13□□□□□ -0.95
ABCD3-202ENST00000370214 ZGPATQ8N5A5 531 aaKnown RBP9.13□□□□□ -0.95
ABCD3-202ENST00000370214 NGDNQ8NEJ9 315 aaKnown RBP9.13□□□□□ -0.95
ABCD3-202ENST00000370214 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
ABCD3-202ENST00000370214 TRIM44Q96DX7 344 aaPredicted RBP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 STAC3Q96MF2 364 aa9.12□□□□□ -0.95
ABCD3-202ENST00000370214 RBM27Q9P2N5 1060 aaKnown RBP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 ZFYVE16Q7Z3T8 1539 aa9.12□□□□□ -0.95
ABCD3-202ENST00000370214 NUCB1Q02818 461 aa9.12□□□□□ -0.95
ABCD3-202ENST00000370214 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 UPF3BQ9BZI7 483 aaKnown RBP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
ABCD3-202ENST00000370214 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
ABCD3-202ENST00000370214 FCHSD2O94868 740 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 PRKCSHP14314 528 aaPredicted RBP9.11□□□□□ -0.95
ABCD3-202ENST00000370214 AMPHP49418 695 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 CAVIN1Q6NZI2 390 aaKnown RBP9.11□□□□□ -0.95
ABCD3-202ENST00000370214 TRPM2O94759 1503 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 ZNF518AQ6AHZ1 1483 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
ABCD3-202ENST00000370214 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 PHF23Q9BUL5 403 aaPredicted RBP9.11□□□□□ -0.95
ABCD3-202ENST00000370214 TSPYL4Q9UJ04 414 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 ARAP3Q8WWN8 1544 aa9.11□□□□□ -0.95
ABCD3-202ENST00000370214 GSPT1P15170 499 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms