RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CHMP5Q9NZZ3 219 aa21.53■■□□□ 1.04
SNX27-203ENST00000368843 RUFY1Q96T51 708 aa21.52■■□□□ 1.04
SNX27-203ENST00000368843 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
SNX27-203ENST00000368843 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.52■■□□□ 1.04
SNX27-203ENST00000368843 PRKAR2BP31323 418 aa21.52■■□□□ 1.04
SNX27-203ENST00000368843 CCDC158Q5M9N0 1113 aa21.52■■□□□ 1.04
SNX27-203ENST00000368843 NUCB2P80303 420 aa21.52■■□□□ 1.03
SNX27-203ENST00000368843 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
SNX27-203ENST00000368843 MYL6BP14649 208 aa21.51■■□□□ 1.03
SNX27-203ENST00000368843 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
SNX27-203ENST00000368843 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
SNX27-203ENST00000368843 DHX37Q8IY37 1157 aaKnown RBP21.5■■□□□ 1.03
SNX27-203ENST00000368843 GNAI3P08754 354 aa21.5■■□□□ 1.03
SNX27-203ENST00000368843 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
SNX27-203ENST00000368843 PAF1Q8N7H5 531 aa21.49■■□□□ 1.03
SNX27-203ENST00000368843 NAT10Q9H0A0 1025 aaKnown RBP21.49■■□□□ 1.03
SNX27-203ENST00000368843 KRT18P05783 430 aaKnown RBP21.49■■□□□ 1.03
SNX27-203ENST00000368843 CDK19Q9BWU1 502 aa21.49■■□□□ 1.03
SNX27-203ENST00000368843 SIL1Q9H173 461 aa21.49■■□□□ 1.03
SNX27-203ENST00000368843 IFT57Q9NWB7 429 aa21.49■■□□□ 1.03
SNX27-203ENST00000368843 STAC3Q96MF2 364 aa21.48■■□□□ 1.03
SNX27-203ENST00000368843 SDF4Q9BRK5 362 aa21.48■■□□□ 1.03
SNX27-203ENST00000368843 THEMISQ8N1K5 641 aaPredicted RBP21.47■■□□□ 1.03
SNX27-203ENST00000368843 ADAMTS8Q9UP79 889 aa21.47■■□□□ 1.03
SNX27-203ENST00000368843 CAGE1Q8TC20 777 aa21.46■■□□□ 1.03
SNX27-203ENST00000368843 AK7Q96M32 723 aa21.46■■□□□ 1.03
SNX27-203ENST00000368843 SPG7Q9UQ90 795 aa21.46■■□□□ 1.03
SNX27-203ENST00000368843 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX27-203ENST00000368843 ERC1Q8IUD2 1116 aa21.46■■□□□ 1.03
SNX27-203ENST00000368843 SYNJ2O15056 1496 aa21.46■■□□□ 1.03
SNX27-203ENST00000368843 TWISTNBQ3B726 338 aaPredicted RBP21.46■■□□□ 1.03
SNX27-203ENST00000368843 IGF1RP08069 1367 aa21.45■■□□□ 1.02
SNX27-203ENST00000368843 HIP1O00291 1037 aa21.45■■□□□ 1.02
SNX27-203ENST00000368843 GNAI2P04899 355 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 MAP4K4O95819 1239 aaPredicted RBP21.44■■□□□ 1.02
SNX27-203ENST00000368843 TXLNAP40222 546 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 SULT6B1Q6IMI4 303 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 MNS1Q8NEH6 495 aa21.44■■□□□ 1.02
SNX27-203ENST00000368843 MAGEC2Q9UBF1 373 aaPredicted RBP21.44■■□□□ 1.02
SNX27-203ENST00000368843 NCOA2Q15596 1464 aa21.43■■□□□ 1.02
SNX27-203ENST00000368843 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
SNX27-203ENST00000368843 CEBPZQ03701 1054 aaKnown RBP21.43■■□□□ 1.02
SNX27-203ENST00000368843 CCDC173Q0VFZ6 552 aa21.43■■□□□ 1.02
SNX27-203ENST00000368843 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
SNX27-203ENST00000368843 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
SNX27-203ENST00000368843 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
SNX27-203ENST00000368843 MPHOSPH8Q99549 860 aa21.43■■□□□ 1.02
SNX27-203ENST00000368843 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
SNX27-203ENST00000368843 XPCQ01831 940 aaPredicted RBP21.42■■□□□ 1.02
SNX27-203ENST00000368843 BRPF1P55201 1214 aaPredicted RBP21.42■■□□□ 1.02
SNX27-203ENST00000368843 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
SNX27-203ENST00000368843 TEX35Q5T0J7 233 aa21.42■■□□□ 1.02
SNX27-203ENST00000368843 BICDL1Q6ZP65 573 aa21.42■■□□□ 1.02
SNX27-203ENST00000368843 SYCP1Q15431 976 aa21.42■■□□□ 1.02
SNX27-203ENST00000368843 CDR1P51861 262 aa21.41■■□□□ 1.02
SNX27-203ENST00000368843 CABP1Q9NZU7 370 aa21.4■■□□□ 1.02
SNX27-203ENST00000368843 SMC2O95347 1197 aa21.4■■□□□ 1.02
SNX27-203ENST00000368843 ZSCAN29Q8IWY8 852 aaPredicted RBP21.4■■□□□ 1.02
SNX27-203ENST00000368843 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
SNX27-203ENST00000368843 STK3Q13188 491 aa21.4■■□□□ 1.02
SNX27-203ENST00000368843 ZHX3Q9H4I2 956 aa21.4■■□□□ 1.02
SNX27-203ENST00000368843 SPINK5Q9NQ38 1064 aaPredicted RBP21.4■■□□□ 1.02
SNX27-203ENST00000368843 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.02
SNX27-203ENST00000368843 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
SNX27-203ENST00000368843 RSPH6AQ9H0K4 717 aa21.39■■□□□ 1.01
SNX27-203ENST00000368843 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
SNX27-203ENST00000368843 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
SNX27-203ENST00000368843 ANKLE2Q86XL3 938 aa21.38■■□□□ 1.01
SNX27-203ENST00000368843 RDXP35241 583 aaKnown RBP21.38■■□□□ 1.01
SNX27-203ENST00000368843 NUP133Q8WUM0 1156 aa21.37■■□□□ 1.01
SNX27-203ENST00000368843 PRDM11Q9NQV5 511 aa21.37■■□□□ 1.01
SNX27-203ENST00000368843 FKBP4Q02790 459 aaKnown RBP eCLIP21.37■■□□□ 1.01
SNX27-203ENST00000368843 NACAP1Q9BZK3 213 aa21.37■■□□□ 1.01
SNX27-203ENST00000368843 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
SNX27-203ENST00000368843 KINO60870 393 aaKnown RBP21.37■■□□□ 1.01
SNX27-203ENST00000368843 BTBD11A6QL63 1104 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 MPNDQ8N594 471 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 NEK4P51957 841 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 RTEL1-TNFRSF6BF6WH68 1400 aa21.36■■□□□ 1.01
SNX27-203ENST00000368843 FILIP1LQ4L180 1135 aa21.35■■□□□ 1.01
SNX27-203ENST00000368843 ZNF396Q96N95 335 aaPredicted RBP21.35■■□□□ 1.01
SNX27-203ENST00000368843 AAMPQ13685 434 aa21.35■■□□□ 1.01
SNX27-203ENST00000368843 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
SNX27-203ENST00000368843 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
SNX27-203ENST00000368843 ACBD3Q9H3P7 528 aa21.35■■□□□ 1.01
SNX27-203ENST00000368843 MPHOSPH10O00566 681 aaKnown RBP21.34■■□□□ 1.01
SNX27-203ENST00000368843 BRD4O60885 1362 aaPredicted RBP21.34■■□□□ 1.01
SNX27-203ENST00000368843 ARGLU1Q9NWB6 273 aaPredicted RBP21.34■■□□□ 1.01
SNX27-203ENST00000368843 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
SNX27-203ENST00000368843 IBSPP21815 317 aaPredicted RBP21.34■■□□□ 1.01
SNX27-203ENST00000368843 STK38Q15208 465 aa21.34■■□□□ 1.01
SNX27-203ENST00000368843 SMARCE1Q969G3 411 aa21.34■■□□□ 1.01
SNX27-203ENST00000368843 SCAPERQ9BY12 1400 aa21.33■■□□□ 1.01
SNX27-203ENST00000368843 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
SNX27-203ENST00000368843 SOGA3Q5TF21 947 aa21.33■■□□□ 1.01
SNX27-203ENST00000368843 CDCA7LQ96GN5 454 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms