RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 ZNF428Q96B54 188 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 PDCL3Q9H2J4 239 aa13.14□□□□□ -0.31
EBF3-202ENST00000368648 IDI1Q13907 227 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 CCDC39Q9UFE4 941 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 GTF2E1P29083 439 aaPredicted RBP13.13□□□□□ -0.31
EBF3-202ENST00000368648 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 ABCC5O15440 1437 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 BECN2A8MW95 431 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
EBF3-202ENST00000368648 CLCN1P35523 988 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
EBF3-202ENST00000368648 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
EBF3-202ENST00000368648 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
EBF3-202ENST00000368648 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
EBF3-202ENST00000368648 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
EBF3-202ENST00000368648 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
EBF3-202ENST00000368648 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 HMMRO75330 724 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 RAPGEF4Q8WZA2 1011 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 REC8O95072 547 aa13.11□□□□□ -0.31
EBF3-202ENST00000368648 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
EBF3-202ENST00000368648 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
EBF3-202ENST00000368648 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
EBF3-202ENST00000368648 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
EBF3-202ENST00000368648 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 GPRASP1Q5JY77 1395 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 TAF7LQ5H9L4 462 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
EBF3-202ENST00000368648 KIF14Q15058 1648 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 PLCH2O75038 1416 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 CDC45O75419 566 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
EBF3-202ENST00000368648 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
EBF3-202ENST00000368648 HSPA2P54652 639 aa13.08□□□□□ -0.32
EBF3-202ENST00000368648 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
EBF3-202ENST00000368648 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
EBF3-202ENST00000368648 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
EBF3-202ENST00000368648 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 TRIM5Q9C035 493 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 PCDHB15Q9Y5E8 787 aa13.07□□□□□ -0.32
EBF3-202ENST00000368648 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
EBF3-202ENST00000368648 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 WWC1Q8IX03 1113 aa13.06□□□□□ -0.32
EBF3-202ENST00000368648 SF3A1Q15459 793 aaKnown RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 ZBTB9Q96C00 473 aa13.06□□□□□ -0.32
EBF3-202ENST00000368648 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
EBF3-202ENST00000368648 DIAPH3Q9NSV4 1193 aa13.06□□□□□ -0.32
EBF3-202ENST00000368648 TPD52L1Q16890 204 aaPredicted RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
EBF3-202ENST00000368648 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
EBF3-202ENST00000368648 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
EBF3-202ENST00000368648 TMEM57Q8N5G2 664 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 TBC1D32Q96NH3 1257 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 H3BQV1 296 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
EBF3-202ENST00000368648 USP25Q9UHP3 1055 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
EBF3-202ENST00000368648 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
EBF3-202ENST00000368648 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
EBF3-202ENST00000368648 ANKRD30BQ9BXX2 1392 aa13.04□□□□□ -0.32
EBF3-202ENST00000368648 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
EBF3-202ENST00000368648 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
EBF3-202ENST00000368648 PDCL2Q8N4E4 241 aa13.04□□□□□ -0.32
EBF3-202ENST00000368648 ZC3H6P61129 1189 aaKnown RBP13.04□□□□□ -0.32
EBF3-202ENST00000368648 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
EBF3-202ENST00000368648 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
EBF3-202ENST00000368648 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
EBF3-202ENST00000368648 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
EBF3-202ENST00000368648 TSPOAP1O95153 1857 aa13.03□□□□□ -0.32
EBF3-202ENST00000368648 MAP4K4O95819 1239 aaPredicted RBP13.03□□□□□ -0.32
EBF3-202ENST00000368648 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
EBF3-202ENST00000368648 ATF7IPQ6VMQ6 1270 aa13.03□□□□□ -0.32
EBF3-202ENST00000368648 RARSP54136 660 aaKnown RBP13.02□□□□□ -0.32
EBF3-202ENST00000368648 HMGN5P82970 282 aaKnown RBP13.02□□□□□ -0.32
EBF3-202ENST00000368648 TSC1Q92574 1164 aa13.02□□□□□ -0.32
EBF3-202ENST00000368648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms