RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
TRAF3-202ENST00000351691 PCDHB15Q9Y5E8 787 aa18.8■□□□□ 0.6
TRAF3-202ENST00000351691 HSCBQ8IWL3 235 aa18.8■□□□□ 0.6
TRAF3-202ENST00000351691 SNX21Q969T3 373 aa18.8■□□□□ 0.6
TRAF3-202ENST00000351691 PPP1R9BQ96SB3 815 aa18.79■□□□□ 0.6
TRAF3-202ENST00000351691 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
TRAF3-202ENST00000351691 CCDC173Q0VFZ6 552 aa18.78■□□□□ 0.6
TRAF3-202ENST00000351691 MAP7D2Q96T17 732 aa18.78■□□□□ 0.6
TRAF3-202ENST00000351691 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
TRAF3-202ENST00000351691 VGFO15240 615 aaPredicted RBP18.78■□□□□ 0.6
TRAF3-202ENST00000351691 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
TRAF3-202ENST00000351691 GBP4Q96PP9 640 aa18.77■□□□□ 0.6
TRAF3-202ENST00000351691 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
TRAF3-202ENST00000351691 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.6
TRAF3-202ENST00000351691 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.59
TRAF3-202ENST00000351691 WWC1Q8IX03 1113 aa18.77■□□□□ 0.59
TRAF3-202ENST00000351691 SHPRHQ149N8 1683 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 NSD2O96028 1365 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 OFD1O75665 1012 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
TRAF3-202ENST00000351691 ARHGEF28Q8N1W1 1705 aaKnown RBP18.75■□□□□ 0.59
TRAF3-202ENST00000351691 IBTKQ9P2D0 1353 aaPredicted RBP18.75■□□□□ 0.59
TRAF3-202ENST00000351691 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
TRAF3-202ENST00000351691 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
TRAF3-202ENST00000351691 SPRYD3Q8NCJ5 442 aa18.74■□□□□ 0.59
TRAF3-202ENST00000351691 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
TRAF3-202ENST00000351691 ZSCAN30Q86W11 494 aa18.74■□□□□ 0.59
TRAF3-202ENST00000351691 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
TRAF3-202ENST00000351691 RBM25P49756 843 aaKnown RBP18.73■□□□□ 0.59
TRAF3-202ENST00000351691 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
TRAF3-202ENST00000351691 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
TRAF3-202ENST00000351691 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
TRAF3-202ENST00000351691 GAS2L3Q86XJ1 694 aa18.72■□□□□ 0.59
TRAF3-202ENST00000351691 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
TRAF3-202ENST00000351691 HS1BP3Q53T59 392 aa18.72■□□□□ 0.59
TRAF3-202ENST00000351691 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
TRAF3-202ENST00000351691 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
TRAF3-202ENST00000351691 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
TRAF3-202ENST00000351691 TNPO1Q92973 898 aaKnown RBP18.71■□□□□ 0.59
TRAF3-202ENST00000351691 SLC12A5Q9H2X9 1139 aa18.71■□□□□ 0.59
TRAF3-202ENST00000351691 ANKRD36BQ8N2N9 1353 aa18.71■□□□□ 0.59
TRAF3-202ENST00000351691 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
TRAF3-202ENST00000351691 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
TRAF3-202ENST00000351691 TULP4Q9NRJ4 1543 aa18.7■□□□□ 0.58
TRAF3-202ENST00000351691 RLBP1P12271 317 aa18.7■□□□□ 0.58
TRAF3-202ENST00000351691 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
TRAF3-202ENST00000351691 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
TRAF3-202ENST00000351691 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
TRAF3-202ENST00000351691 CLEC17AQ6ZS10 378 aa18.69■□□□□ 0.58
TRAF3-202ENST00000351691 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
TRAF3-202ENST00000351691 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
TRAF3-202ENST00000351691 CCDC27Q2M243 656 aa18.68■□□□□ 0.58
TRAF3-202ENST00000351691 ANP32BQ92688 251 aaKnown RBP18.68■□□□□ 0.58
TRAF3-202ENST00000351691 PRDM4Q9UKN5 801 aa18.67■□□□□ 0.58
TRAF3-202ENST00000351691 MTERF4Q7Z6M4 381 aaKnown RBP18.66■□□□□ 0.58
TRAF3-202ENST00000351691 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
TRAF3-202ENST00000351691 PREX1Q8TCU6 1659 aa18.65■□□□□ 0.58
TRAF3-202ENST00000351691 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-202ENST00000351691 MLECQ14165 292 aa18.65■□□□□ 0.58
TRAF3-202ENST00000351691 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
TRAF3-202ENST00000351691 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
TRAF3-202ENST00000351691 RIPK4P57078 832 aa18.64■□□□□ 0.57
TRAF3-202ENST00000351691 MYO5BQ9ULV0 1848 aa18.64■□□□□ 0.57
TRAF3-202ENST00000351691 AGLP35573 1532 aa18.64■□□□□ 0.57
TRAF3-202ENST00000351691 IDI1Q13907 227 aa18.64■□□□□ 0.57
TRAF3-202ENST00000351691 ZNF500O60304 480 aaPredicted RBP18.62■□□□□ 0.57
TRAF3-202ENST00000351691 MTHFSP49914 203 aa18.62■□□□□ 0.57
TRAF3-202ENST00000351691 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
TRAF3-202ENST00000351691 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
TRAF3-202ENST00000351691 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
TRAF3-202ENST00000351691 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
TRAF3-202ENST00000351691 TCP11L2Q8N4U5 519 aa18.61■□□□□ 0.57
TRAF3-202ENST00000351691 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
TRAF3-202ENST00000351691 MED14O60244 1454 aa18.6■□□□□ 0.57
TRAF3-202ENST00000351691 ATAD2Q6PL18 1390 aa18.6■□□□□ 0.57
TRAF3-202ENST00000351691 ABCC11Q96J66 1382 aa18.6■□□□□ 0.57
TRAF3-202ENST00000351691 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
TRAF3-202ENST00000351691 ZNF445P59923 1031 aa18.6■□□□□ 0.57
TRAF3-202ENST00000351691 SMAP1Q8IYB5 467 aaPredicted RBP18.6■□□□□ 0.57
TRAF3-202ENST00000351691 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
TRAF3-202ENST00000351691 ANKRD26Q9UPS8 1709 aa18.59■□□□□ 0.57
TRAF3-202ENST00000351691 PODXL2Q9NZ53 605 aa18.58■□□□□ 0.57
TRAF3-202ENST00000351691 NOL7Q9UMY1 257 aaKnown RBP18.58■□□□□ 0.57
TRAF3-202ENST00000351691 PTPRMP28827 1452 aa18.58■□□□□ 0.56
TRAF3-202ENST00000351691 MCM5P33992 734 aa18.58■□□□□ 0.56
TRAF3-202ENST00000351691 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
TRAF3-202ENST00000351691 DDX19BQ9UMR2 479 aa18.57■□□□□ 0.56
TRAF3-202ENST00000351691 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
TRAF3-202ENST00000351691 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
TRAF3-202ENST00000351691 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
TRAF3-202ENST00000351691 DYNC1I1O14576 645 aa18.56■□□□□ 0.56
TRAF3-202ENST00000351691 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
TRAF3-202ENST00000351691 PDLIM2Q96JY6 352 aa18.56■□□□□ 0.56
TRAF3-202ENST00000351691 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
TRAF3-202ENST00000351691 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
TRAF3-202ENST00000351691 K7ELQ4 463 aaPredicted RBP18.55■□□□□ 0.56
TRAF3-202ENST00000351691 TERF2IPQ9NYB0 399 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms