RNA–Protein interactions for RNA: ENST00000349004.5

NDRG3-201, Transcript of NDRG family member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NDRG3, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG3-201ENST00000349004 STRN4Q9NRL3 753 aa7.94□□□□□ -1.14
NDRG3-201ENST00000349004 CENPJQ9HC77 1338 aaPredicted RBP7.93□□□□□ -1.14
NDRG3-201ENST00000349004 ADGRB1O14514 1584 aa7.93□□□□□ -1.14
NDRG3-201ENST00000349004 C11orf95C9JLR9 678 aaPredicted RBP7.93□□□□□ -1.14
NDRG3-201ENST00000349004 ACEP12821 1306 aa7.93□□□□□ -1.14
NDRG3-201ENST00000349004 WASHC2AQ641Q2 1341 aa7.93□□□□□ -1.14
NDRG3-201ENST00000349004 ANP32CO43423 234 aa7.93□□□□□ -1.14
NDRG3-201ENST00000349004 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
NDRG3-201ENST00000349004 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
NDRG3-201ENST00000349004 MYOM2P54296 1465 aa7.92□□□□□ -1.14
NDRG3-201ENST00000349004 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
NDRG3-201ENST00000349004 NRXN1Q9ULB1 1477 aa7.92□□□□□ -1.14
NDRG3-201ENST00000349004 ABTB2Q8N961 1025 aa7.92□□□□□ -1.14
NDRG3-201ENST00000349004 RXRBP28702 533 aa7.91□□□□□ -1.14
NDRG3-201ENST00000349004 SLC12A5Q9H2X9 1139 aa7.91□□□□□ -1.14
NDRG3-201ENST00000349004 SENP3-EIF4A1A0A087X0R7 540 aa7.91□□□□□ -1.14
NDRG3-201ENST00000349004 FAM83GA6ND36 823 aa7.91□□□□□ -1.14
NDRG3-201ENST00000349004 SPATA31A3Q5VYP0 1347 aa7.91□□□□□ -1.14
NDRG3-201ENST00000349004 BTG4Q9NY30 223 aa7.9□□□□□ -1.14
NDRG3-201ENST00000349004 DCCP43146 1447 aa7.9□□□□□ -1.14
NDRG3-201ENST00000349004 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.15
NDRG3-201ENST00000349004 TECPR2O15040 1411 aa7.9□□□□□ -1.15
NDRG3-201ENST00000349004 NCOA3Q9Y6Q9 1424 aa7.9□□□□□ -1.15
NDRG3-201ENST00000349004 FAM98CQ17RN3 349 aaKnown RBP7.89□□□□□ -1.15
NDRG3-201ENST00000349004 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
NDRG3-201ENST00000349004 CCDC61Q9Y6R9 512 aa7.89□□□□□ -1.15
NDRG3-201ENST00000349004 NLRP6P59044 892 aa7.89□□□□□ -1.15
NDRG3-201ENST00000349004 PXDNQ92626 1479 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
NDRG3-201ENST00000349004 GPRASP1Q5JY77 1395 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 AHDC1Q5TGY3 1603 aaPredicted RBP7.88□□□□□ -1.15
NDRG3-201ENST00000349004 USP32Q8NFA0 1604 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 ARHGEF28Q8N1W1 1705 aaKnown RBP7.88□□□□□ -1.15
NDRG3-201ENST00000349004 BCL11AQ9H165 835 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 CDC42BPGQ6DT37 1551 aa7.88□□□□□ -1.15
NDRG3-201ENST00000349004 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
NDRG3-201ENST00000349004 ZNF772Q68DY9 489 aaPredicted RBP7.87□□□□□ -1.15
NDRG3-201ENST00000349004 NHSL1Q5SYE7 1610 aa7.87□□□□□ -1.15
NDRG3-201ENST00000349004 FMN2Q9NZ56 1722 aa7.87□□□□□ -1.15
NDRG3-201ENST00000349004 KIAA0232Q92628 1395 aa7.86□□□□□ -1.15
NDRG3-201ENST00000349004 TNNT2P45379 298 aaPredicted RBP7.86□□□□□ -1.15
NDRG3-201ENST00000349004 NME9Q86XW9 330 aa7.86□□□□□ -1.15
NDRG3-201ENST00000349004 LTV1Q96GA3 475 aaPredicted RBP7.86□□□□□ -1.15
NDRG3-201ENST00000349004 ATP7BP35670 1465 aa7.86□□□□□ -1.15
NDRG3-201ENST00000349004 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
NDRG3-201ENST00000349004 EVC2Q86UK5 1308 aa7.85□□□□□ -1.15
NDRG3-201ENST00000349004 TNS3Q68CZ2 1445 aa7.85□□□□□ -1.15
NDRG3-201ENST00000349004 EVA1CP58658 441 aa7.85□□□□□ -1.15
NDRG3-201ENST00000349004 LARP1Q6PKG0 1096 aaKnown RBP7.84□□□□□ -1.15
NDRG3-201ENST00000349004 DEFB132Q7Z7B7 95 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 TULP4Q9NRJ4 1543 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 SIRT1Q96EB6 747 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 GJD4Q96KN9 370 aaPredicted RBP7.84□□□□□ -1.15
NDRG3-201ENST00000349004 TRPC5Q9UL62 973 aaPredicted RBP7.84□□□□□ -1.15
NDRG3-201ENST00000349004 LAMC1P11047 1609 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 KAT6BQ8WYB5 2073 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 KNDC1Q76NI1 1749 aa7.84□□□□□ -1.15
NDRG3-201ENST00000349004 QRICH2Q9H0J4 1663 aa7.84□□□□□ -1.16
NDRG3-201ENST00000349004 BCL9LQ86UU0 1499 aa7.84□□□□□ -1.16
NDRG3-201ENST00000349004 TRPM1Q7Z4N2 1603 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 PPM1GO15355 546 aaPredicted RBP7.83□□□□□ -1.16
NDRG3-201ENST00000349004 GCP02774 474 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 RBM6P78332 1123 aaKnown RBP7.83□□□□□ -1.16
NDRG3-201ENST00000349004 UNC5CLQ8IV45 518 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 FAM9BQ8IZU0 186 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 AXIN2Q9Y2T1 843 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 RGS12O14924 1447 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 GGNBP2Q9H3C7 697 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 SHPRHQ149N8 1683 aa7.83□□□□□ -1.16
NDRG3-201ENST00000349004 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
NDRG3-201ENST00000349004 RBM19Q9Y4C8 960 aaKnown RBP7.83□□□□□ -1.16
NDRG3-201ENST00000349004 NEFLP07196 543 aa7.82□□□□□ -1.16
NDRG3-201ENST00000349004 FNBP4Q8N3X1 1017 aaPredicted RBP7.82□□□□□ -1.16
NDRG3-201ENST00000349004 UPF1Q92900 1129 aaKnown RBP eCLIP7.82□□□□□ -1.163e-12■■□□□ 13.1
NDRG3-201ENST00000349004 USP47Q96K76 1375 aa7.82□□□□□ -1.16
NDRG3-201ENST00000349004 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
NDRG3-201ENST00000349004 TESK2Q96S53 571 aa7.82□□□□□ -1.16
NDRG3-201ENST00000349004 KTN1Q86UP2 1357 aaKnown RBP7.82□□□□□ -1.16
NDRG3-201ENST00000349004 RRS1Q15050 365 aaKnown RBP7.81□□□□□ -1.16
NDRG3-201ENST00000349004 DLC1Q96QB1 1528 aa7.81□□□□□ -1.16
NDRG3-201ENST00000349004 CCDC7Q96M83 1385 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 KIF7Q2M1P5 1343 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 TTC21BQ7Z4L5 1316 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 PTF1AQ7RTS3 328 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 STAC3Q96MF2 364 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 TOM1L2Q6ZVM7 507 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 NLRP13Q86W25 1043 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 USHBP1Q8N6Y0 703 aa7.8□□□□□ -1.16
NDRG3-201ENST00000349004 PRKRIP1Q9H875 184 aaPredicted RBP7.8□□□□□ -1.16
NDRG3-201ENST00000349004 ARHGEF10O15013 1369 aa7.79□□□□□ -1.16
NDRG3-201ENST00000349004 EIF3AQ14152 1382 aaKnown RBP7.79□□□□□ -1.16
NDRG3-201ENST00000349004 ANKARQ7Z5J8 1434 aa7.79□□□□□ -1.16
NDRG3-201ENST00000349004 RALGAPBQ86X10 1494 aa7.79□□□□□ -1.16
NDRG3-201ENST00000349004 A0A1W2PP64 1363 aa7.79□□□□□ -1.16
NDRG3-201ENST00000349004 PSDA5PKW4 1024 aaPredicted RBP7.78□□□□□ -1.16
NDRG3-201ENST00000349004 MSH5O43196 834 aa7.78□□□□□ -1.16
NDRG3-201ENST00000349004 TRIM37O94972 964 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms