RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
SEC24A-201ENST00000322887 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
SEC24A-201ENST00000322887 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
SEC24A-201ENST00000322887 RRAGDQ9NQL2 400 aaPredicted RBP15.69■□□□□ 0.1
SEC24A-201ENST00000322887 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
SEC24A-201ENST00000322887 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
SEC24A-201ENST00000322887 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
SEC24A-201ENST00000322887 CPS1P31327 1500 aa15.67■□□□□ 0.1
SEC24A-201ENST00000322887 CLUAP1Q96AJ1 413 aa15.67■□□□□ 0.1
SEC24A-201ENST00000322887 PTCH1Q13635 1447 aa15.67■□□□□ 0.1
SEC24A-201ENST00000322887 TMEM132EQ6IEE7 984 aa15.67■□□□□ 0.1
SEC24A-201ENST00000322887 PTPRUQ92729 1446 aa15.67■□□□□ 0.1
SEC24A-201ENST00000322887 CHD2O14647 1828 aaKnown RBP15.66■□□□□ 0.1
SEC24A-201ENST00000322887 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
SEC24A-201ENST00000322887 KCNA6P17658 529 aa15.66■□□□□ 0.1
SEC24A-201ENST00000322887 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
SEC24A-201ENST00000322887 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
SEC24A-201ENST00000322887 NKTRP30414 1462 aaKnown RBP15.64■□□□□ 0.09
SEC24A-201ENST00000322887 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
SEC24A-201ENST00000322887 RLBP1P12271 317 aa15.64■□□□□ 0.09
SEC24A-201ENST00000322887 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
SEC24A-201ENST00000322887 ARHGEF28Q8N1W1 1705 aaKnown RBP15.64■□□□□ 0.09
SEC24A-201ENST00000322887 AMOTL2Q9Y2J4 779 aa15.63■□□□□ 0.09
SEC24A-201ENST00000322887 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.63■□□□□ 0.09
SEC24A-201ENST00000322887 PCDHB15Q9Y5E8 787 aa15.62■□□□□ 0.09
SEC24A-201ENST00000322887 NCOA3Q9Y6Q9 1424 aa15.61■□□□□ 0.09
SEC24A-201ENST00000322887 TRAK1Q9UPV9 953 aa15.61■□□□□ 0.09
SEC24A-201ENST00000322887 ROBO2Q9HCK4 1378 aa15.6■□□□□ 0.09
SEC24A-201ENST00000322887 CENPJQ9HC77 1338 aaPredicted RBP15.6■□□□□ 0.09
SEC24A-201ENST00000322887 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
SEC24A-201ENST00000322887 CARD14Q9BXL6 1004 aa15.59■□□□□ 0.09
SEC24A-201ENST00000322887 STK26Q9P289 416 aa15.59■□□□□ 0.09
SEC24A-201ENST00000322887 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.08
SEC24A-201ENST00000322887 UBE2Q2Q8WVN8 375 aa15.58■□□□□ 0.08
SEC24A-201ENST00000322887 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
SEC24A-201ENST00000322887 FAM43AQ8N2R8 423 aa15.57■□□□□ 0.08
SEC24A-201ENST00000322887 ADGRB2O60241 1585 aa15.56■□□□□ 0.08
SEC24A-201ENST00000322887 ANTXR1Q9H6X2 564 aa15.56■□□□□ 0.08
SEC24A-201ENST00000322887 QRICH2Q9H0J4 1663 aa15.55■□□□□ 0.08
SEC24A-201ENST00000322887 WWC1Q8IX03 1113 aa15.55■□□□□ 0.08
SEC24A-201ENST00000322887 PUS7Q96PZ0 661 aaKnown RBP15.55■□□□□ 0.08
SEC24A-201ENST00000322887 PDZRN3Q9UPQ7 1066 aa15.55■□□□□ 0.08
SEC24A-201ENST00000322887 STRCP1A6NGW2 1772 aa15.55■□□□□ 0.08
SEC24A-201ENST00000322887 E9PSI1 815 aa15.53■□□□□ 0.08
SEC24A-201ENST00000322887 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.089e-8■■■■□ 21.9
SEC24A-201ENST00000322887 WAPLQ7Z5K2 1190 aa15.52■□□□□ 0.08
SEC24A-201ENST00000322887 MFAP1P55081 439 aaKnown RBP15.52■□□□□ 0.08
SEC24A-201ENST00000322887 ZNF335Q9H4Z2 1342 aaPredicted RBP15.52■□□□□ 0.07
SEC24A-201ENST00000322887 CDCA8Q53HL2 280 aa15.52■□□□□ 0.07
SEC24A-201ENST00000322887 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
SEC24A-201ENST00000322887 LTBP4Q8N2S1 1624 aa15.51■□□□□ 0.07
SEC24A-201ENST00000322887 LRRC7Q96NW7 1537 aa15.51■□□□□ 0.07
SEC24A-201ENST00000322887 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
SEC24A-201ENST00000322887 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
SEC24A-201ENST00000322887 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
SEC24A-201ENST00000322887 DCCP43146 1447 aa15.5■□□□□ 0.07
SEC24A-201ENST00000322887 INSRP06213 1382 aa15.5■□□□□ 0.07
SEC24A-201ENST00000322887 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
SEC24A-201ENST00000322887 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
SEC24A-201ENST00000322887 BECN1Q14457 450 aa15.49■□□□□ 0.07
SEC24A-201ENST00000322887 TULP4Q9NRJ4 1543 aa15.49■□□□□ 0.07
SEC24A-201ENST00000322887 TBC1D32Q96NH3 1257 aa15.49■□□□□ 0.07
SEC24A-201ENST00000322887 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
SEC24A-201ENST00000322887 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
SEC24A-201ENST00000322887 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
SEC24A-201ENST00000322887 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
SEC24A-201ENST00000322887 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
SEC24A-201ENST00000322887 TCP11L2Q8N4U5 519 aa15.48■□□□□ 0.07
SEC24A-201ENST00000322887 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
SEC24A-201ENST00000322887 MYOM1P52179 1685 aa15.47■□□□□ 0.07
SEC24A-201ENST00000322887 NALCNQ8IZF0 1738 aa15.47■□□□□ 0.07
SEC24A-201ENST00000322887 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
SEC24A-201ENST00000322887 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
SEC24A-201ENST00000322887 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
SEC24A-201ENST00000322887 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
SEC24A-201ENST00000322887 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 ANKARQ7Z5J8 1434 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
SEC24A-201ENST00000322887 SAFB2Q14151 953 aaKnown RBP eCLIP15.45■□□□□ 0.06
SEC24A-201ENST00000322887 IQSEC2Q5JU85 1478 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 ATAD2Q6PL18 1390 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
SEC24A-201ENST00000322887 XIRP1Q702N8 1843 aaKnown RBP15.44■□□□□ 0.06
SEC24A-201ENST00000322887 MCM4P33991 863 aa15.44■□□□□ 0.06
SEC24A-201ENST00000322887 GOLGA6L3A6NEY3 463 aa15.43■□□□□ 0.06
SEC24A-201ENST00000322887 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
SEC24A-201ENST00000322887 MSH6P52701 1360 aa15.43■□□□□ 0.06
SEC24A-201ENST00000322887 FMN2Q9NZ56 1722 aa15.42■□□□□ 0.06
SEC24A-201ENST00000322887 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
SEC24A-201ENST00000322887 ERBB4Q15303 1308 aa15.42■□□□□ 0.06
SEC24A-201ENST00000322887 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
SEC24A-201ENST00000322887 TRAK2O60296 914 aa15.41■□□□□ 0.06
SEC24A-201ENST00000322887 MTHFSP49914 203 aa15.41■□□□□ 0.06
SEC24A-201ENST00000322887 CADPS2Q86UW7 1296 aa15.41■□□□□ 0.06
SEC24A-201ENST00000322887 C22orf23Q9BZE7 217 aa15.41■□□□□ 0.06
SEC24A-201ENST00000322887 ATP7BP35670 1465 aa15.41■□□□□ 0.06
SEC24A-201ENST00000322887 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.05
SEC24A-201ENST00000322887 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
SEC24A-201ENST00000322887 CCDC61Q9Y6R9 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms