RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 IL27Q8NEV9 243 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 TSNARE1Q96NA8 513 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 NDC80O14777 642 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 ERLIN1O75477 346 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 IFT57Q9NWB7 429 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 PSME1Q06323 249 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 CEP135Q66GS9 1140 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 DZIP1LQ8IYY4 767 aaKnown RBP9.58□□□□□ -0.88
PCNX1-201ENST00000304743 DCAF11Q8TEB1 546 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 GNL3LQ9NVN8 582 aaKnown RBP9.58□□□□□ -0.88
PCNX1-201ENST00000304743 NEUROD6Q96NK8 337 aa9.58□□□□□ -0.88
PCNX1-201ENST00000304743 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-201ENST00000304743 RNF187Q5TA31 235 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-201ENST00000304743 ATF3P18847 181 aa9.57□□□□□ -0.88
PCNX1-201ENST00000304743 XPCQ01831 940 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-201ENST00000304743 SDF4Q9BRK5 362 aa9.57□□□□□ -0.88
PCNX1-201ENST00000304743 ODF2LQ9ULJ1 636 aa9.57□□□□□ -0.88
PCNX1-201ENST00000304743 CFAP45Q9UL16 551 aa9.57□□□□□ -0.88
PCNX1-201ENST00000304743 DZIP1Q86YF9 867 aaKnown RBP9.56□□□□□ -0.88
PCNX1-201ENST00000304743 CCDC117Q8IWD4 279 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-201ENST00000304743 SMC2O95347 1197 aa9.56□□□□□ -0.88
PCNX1-201ENST00000304743 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
PCNX1-201ENST00000304743 TSHZ2Q9NRE2 1034 aa9.56□□□□□ -0.88
PCNX1-201ENST00000304743 GSTTP1A0A1W2PQM5 241 aa9.56□□□□□ -0.88
PCNX1-201ENST00000304743 FOSBP53539 338 aa9.56□□□□□ -0.88
PCNX1-201ENST00000304743 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-201ENST00000304743 SHTN1A0MZ66 631 aa9.55□□□□□ -0.88
PCNX1-201ENST00000304743 CTNNA2P26232 953 aa9.55□□□□□ -0.88
PCNX1-201ENST00000304743 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
PCNX1-201ENST00000304743 TAF12Q16514 161 aa9.55□□□□□ -0.88
PCNX1-201ENST00000304743 FAM177BA6PVY3 158 aa9.55□□□□□ -0.88
PCNX1-201ENST00000304743 TCHPQ9BT92 498 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-201ENST00000304743 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 MPHOSPH6Q99547 160 aaKnown RBP9.54□□□□□ -0.88
PCNX1-201ENST00000304743 UBE4AQ14139 1066 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 GOLGA6L9A6NEM1 432 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 DAAM2Q86T65 1068 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 SATB1Q01826 763 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 CCP110O43303 1012 aa9.54□□□□□ -0.88
PCNX1-201ENST00000304743 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-201ENST00000304743 TTC36A6NLP5 189 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 PRC1O43663 620 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.53□□□□□ -0.882e-6■■□□□ 14.2
PCNX1-201ENST00000304743 SREK1Q8WXA9 508 aaKnown RBP9.53□□□□□ -0.88
PCNX1-201ENST00000304743 USP8P40818 1118 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 KIF6Q6ZMV9 814 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 CPLX3Q8WVH0 158 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 SKOR2Q2VWA4 1001 aaPredicted RBP9.53□□□□□ -0.88
PCNX1-201ENST00000304743 LRRFIP2Q9Y608 721 aaKnown RBP9.53□□□□□ -0.88
PCNX1-201ENST00000304743 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCNX1-201ENST00000304743 ACTN2P35609 894 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
PCNX1-201ENST00000304743 SNX16P57768 344 aa9.52□□□□□ -0.88
PCNX1-201ENST00000304743 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 CCDC66A2RUB6 948 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 KDM4AO75164 1064 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 SERPINA10Q9UK55 444 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 CCDC14Q49A88 953 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 REC8O95072 547 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 LMAN1P49257 510 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 ANKRD45Q5TZF3 282 aa9.52□□□□□ -0.89
PCNX1-201ENST00000304743 PDE4AP27815 886 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 CTNNBL1Q8WYA6 563 aaPredicted RBP9.51□□□□□ -0.89
PCNX1-201ENST00000304743 CACYBPQ9HB71 228 aaKnown RBP9.51□□□□□ -0.89
PCNX1-201ENST00000304743 ABCC9O60706 1549 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 MACROD2A1Z1Q3 448 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 ERC2O15083 957 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
PCNX1-201ENST00000304743 CLUAP1Q96AJ1 413 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 SPATA32Q96LK8 384 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 TMCO5BA8MYB1 307 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 VIMP08670 466 aaKnown RBP9.51□□□□□ -0.89
PCNX1-201ENST00000304743 NUCB2P80303 420 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 CCDC6Q16204 474 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 HMGB1P09429 215 aaKnown RBP9.51□□□□□ -0.89
PCNX1-201ENST00000304743 ATRXP46100 2492 aa9.51□□□□□ -0.89
PCNX1-201ENST00000304743 OTUD6BQ8N6M0 293 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 SEPT8Q92599 483 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 PSMC4P43686 418 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
PCNX1-201ENST00000304743 CFAP58Q5T655 872 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 GCOM1H8Y6P7 765 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-201ENST00000304743 MYZAPP0CAP1 466 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
PCNX1-201ENST00000304743 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 BIN2Q9UBW5 565 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-201ENST00000304743 TPD52P55327 224 aaPredicted RBP9.5□□□□□ -0.89
PCNX1-201ENST00000304743 COG3Q96JB2 828 aa9.5□□□□□ -0.89
PCNX1-201ENST00000304743 USP5P45974 858 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 CCDC57Q2TAC2 916 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 KIF5CO60282 957 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 C6orf163Q5TEZ5 329 aa9.49□□□□□ -0.89
PCNX1-201ENST00000304743 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms