RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SLIT2O94813 1529 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 PRAM1Q96QH2 718 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 LRP5O75197 1615 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 CDC42BPGQ6DT37 1551 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 MSH5O43196 834 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 BARGINQ6ZT62 677 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 ABTB2Q8N961 1025 aa8.37□□□□□ -1.07
ZNF440-201ENST00000304060 C1QTNF8P60827 252 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 KIF1AQ12756 1690 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 EXOC5O00471 708 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 ZC3H6P61129 1189 aaKnown RBP8.36□□□□□ -1.07
ZNF440-201ENST00000304060 IFFO2Q5TF58 517 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 MTFR1LQ9H019 292 aa8.36□□□□□ -1.07
ZNF440-201ENST00000304060 IQGAP3Q86VI3 1631 aa8.35□□□□□ -1.07
ZNF440-201ENST00000304060 XRN1Q8IZH2 1706 aaKnown RBP8.35□□□□□ -1.07
ZNF440-201ENST00000304060 MINK1Q8N4C8 1332 aaPredicted RBP8.35□□□□□ -1.07
ZNF440-201ENST00000304060 TMEM132EQ6IEE7 984 aa8.35□□□□□ -1.07
ZNF440-201ENST00000304060 C16orf71Q8IYS4 520 aaPredicted RBP8.35□□□□□ -1.07
ZNF440-201ENST00000304060 SRPK2P78362 688 aaKnown RBP8.35□□□□□ -1.07
ZNF440-201ENST00000304060 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
ZNF440-201ENST00000304060 KCNH5Q8NCM2 988 aa8.34□□□□□ -1.07
ZNF440-201ENST00000304060 ARXQ96QS3 562 aa8.34□□□□□ -1.07
ZNF440-201ENST00000304060 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
ZNF440-201ENST00000304060 CAMKK2Q96RR4 588 aa8.34□□□□□ -1.07
ZNF440-201ENST00000304060 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.07
ZNF440-201ENST00000304060 KIF1BO60333 1816 aa8.34□□□□□ -1.08
ZNF440-201ENST00000304060 SPATA31A1Q5TZJ5 1347 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 DISP2A7MBM2 1401 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 YTHDC2Q9H6S0 1430 aaKnown RBP8.33□□□□□ -1.08
ZNF440-201ENST00000304060 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 PLSCR1O15162 318 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
ZNF440-201ENST00000304060 WASLO00401 505 aaPredicted RBP8.32□□□□□ -1.08
ZNF440-201ENST00000304060 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
ZNF440-201ENST00000304060 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
ZNF440-201ENST00000304060 ATF5Q9Y2D1 282 aaPredicted RBP8.32□□□□□ -1.08
ZNF440-201ENST00000304060 CCDC61Q9Y6R9 512 aa8.32□□□□□ -1.08
ZNF440-201ENST00000304060 PRAG1Q86YV5 1406 aa8.32□□□□□ -1.08
ZNF440-201ENST00000304060 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
ZNF440-201ENST00000304060 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
ZNF440-201ENST00000304060 PXDNQ92626 1479 aa8.32□□□□□ -1.08
ZNF440-201ENST00000304060 COL22A1Q8NFW1 1626 aaPredicted RBP8.31□□□□□ -1.08
ZNF440-201ENST00000304060 TAOK2Q9UL54 1235 aa8.31□□□□□ -1.08
ZNF440-201ENST00000304060 FLAD1Q8NFF5 587 aa8.31□□□□□ -1.08
ZNF440-201ENST00000304060 ZBTB7AO95365 584 aa8.31□□□□□ -1.08
ZNF440-201ENST00000304060 NLRP6P59044 892 aa8.31□□□□□ -1.08
ZNF440-201ENST00000304060 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
ZNF440-201ENST00000304060 NUDT16Q96DE0 195 aaKnown RBP8.3□□□□□ -1.08
ZNF440-201ENST00000304060 TECPR2O15040 1411 aa8.3□□□□□ -1.08
ZNF440-201ENST00000304060 RGPD1P0DJD0 1748 aa8.3□□□□□ -1.08
ZNF440-201ENST00000304060 USP32Q8NFA0 1604 aa8.3□□□□□ -1.08
ZNF440-201ENST00000304060 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.3□□□□□ -1.08
ZNF440-201ENST00000304060 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
ZNF440-201ENST00000304060 E9PCH4 1651 aa8.29□□□□□ -1.08
ZNF440-201ENST00000304060 ADGRF5Q8IZF2 1346 aa8.29□□□□□ -1.08
ZNF440-201ENST00000304060 TPRNQ4KMQ1 711 aa8.29□□□□□ -1.08
ZNF440-201ENST00000304060 KIAA0232Q92628 1395 aa8.29□□□□□ -1.08
ZNF440-201ENST00000304060 HIRIP3Q9BW71 556 aaPredicted RBP8.29□□□□□ -1.08
ZNF440-201ENST00000304060 NEXMIFQ5QGS0 1516 aa8.29□□□□□ -1.08
ZNF440-201ENST00000304060 ATP7BP35670 1465 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 SLC15A2Q16348 729 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 CFAP70Q5T0N1 1121 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 MPHOSPH9Q99550 1183 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
ZNF440-201ENST00000304060 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 MYO5BQ9ULV0 1848 aa8.28□□□□□ -1.08
ZNF440-201ENST00000304060 CCDC7Q96M83 1385 aa8.27□□□□□ -1.08
ZNF440-201ENST00000304060 NRXN1Q9ULB1 1477 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 TFCP2L1Q9NZI6 479 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 TXNRD1Q16881 649 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 NWD2Q9ULI1 1742 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 SYT17Q9BSW7 474 aa8.27□□□□□ -1.09
ZNF440-201ENST00000304060 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
ZNF440-201ENST00000304060 COL14A1Q05707 1796 aaKnown RBP8.26□□□□□ -1.09
ZNF440-201ENST00000304060 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
ZNF440-201ENST00000304060 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
ZNF440-201ENST00000304060 NALCNQ8IZF0 1738 aa8.26□□□□□ -1.09
ZNF440-201ENST00000304060 LAMC1P11047 1609 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 SSH2Q76I76 1423 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 GLI3P10071 1580 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 HDGFL2Q7Z4V5 671 aaPredicted RBP8.25□□□□□ -1.09
ZNF440-201ENST00000304060 AATKQ6ZMQ8 1374 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 CDK19Q9BWU1 502 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 GCP02774 474 aa8.25□□□□□ -1.09
ZNF440-201ENST00000304060 LARP1Q6PKG0 1096 aaKnown RBP8.25□□□□□ -1.09
ZNF440-201ENST00000304060 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
ZNF440-201ENST00000304060 SYTL4Q96C24 671 aaPredicted RBP8.24□□□□□ -1.09
ZNF440-201ENST00000304060 EVC2Q86UK5 1308 aa8.24□□□□□ -1.09
ZNF440-201ENST00000304060 APLP1P51693 650 aa8.24□□□□□ -1.09
ZNF440-201ENST00000304060 CRB1P82279 1406 aa8.24□□□□□ -1.09
ZNF440-201ENST00000304060 PIK3C2GO75747 1445 aa8.24□□□□□ -1.09
ZNF440-201ENST00000304060 ACEP12821 1306 aa8.23□□□□□ -1.09
ZNF440-201ENST00000304060 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
ZNF440-201ENST00000304060 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
ZNF440-201ENST00000304060 DLC1Q96QB1 1528 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms