RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
SCLT1-201ENST00000281142 TBX22Q9Y458 520 aa14.55□□□□□ -0.08
SCLT1-201ENST00000281142 YTHDC2Q9H6S0 1430 aaKnown RBP14.55□□□□□ -0.08
SCLT1-201ENST00000281142 AEBP2Q6ZN18 517 aaPredicted RBP14.55□□□□□ -0.08
SCLT1-201ENST00000281142 TNNQ9UQP3 1299 aa14.55□□□□□ -0.08
SCLT1-201ENST00000281142 PTPRUQ92729 1446 aa14.55□□□□□ -0.08
SCLT1-201ENST00000281142 CHD2O14647 1828 aaKnown RBP14.54□□□□□ -0.08
SCLT1-201ENST00000281142 STK26Q9P289 416 aa14.54□□□□□ -0.08
SCLT1-201ENST00000281142 TRAK1Q9UPV9 953 aa14.53□□□□□ -0.08
SCLT1-201ENST00000281142 KNDC1Q76NI1 1749 aa14.53□□□□□ -0.08
SCLT1-201ENST00000281142 ZMYND15Q9H091 742 aa14.53□□□□□ -0.08
SCLT1-201ENST00000281142 CLUAP1Q96AJ1 413 aa14.52□□□□□ -0.08
SCLT1-201ENST00000281142 ANTXR1Q9H6X2 564 aa14.52□□□□□ -0.08
SCLT1-201ENST00000281142 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.09
SCLT1-201ENST00000281142 CANXP27824 592 aaKnown RBP14.52□□□□□ -0.09
SCLT1-201ENST00000281142 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
SCLT1-201ENST00000281142 GLIPR1L2Q4G1C9 344 aa14.51□□□□□ -0.09
SCLT1-201ENST00000281142 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 STRCP1A6NGW2 1772 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 E9PSI1 815 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 GZF1Q9H116 711 aaPredicted RBP14.5□□□□□ -0.09
SCLT1-201ENST00000281142 BECN1Q14457 450 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 BCL2L13Q9BXK5 485 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 TBC1D2Q9BYX2 928 aa14.5□□□□□ -0.09
SCLT1-201ENST00000281142 CPS1P31327 1500 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 AMOTL2Q9Y2J4 779 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 RRP7AQ9Y3A4 280 aaKnown RBP14.49□□□□□ -0.09
SCLT1-201ENST00000281142 PCDHB15Q9Y5E8 787 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
SCLT1-201ENST00000281142 ABCC11Q96J66 1382 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 TECPR2O15040 1411 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 RLBP1P12271 317 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 PIK3R4Q99570 1358 aa14.49□□□□□ -0.09
SCLT1-201ENST00000281142 DLC1Q96QB1 1528 aa14.48□□□□□ -0.09
SCLT1-201ENST00000281142 ROBO2Q9HCK4 1378 aa14.48□□□□□ -0.09
SCLT1-201ENST00000281142 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
SCLT1-201ENST00000281142 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 MAPK8IP3Q9UPT6 1336 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 XRCC6P12956 609 aaKnown RBP eCLIP14.47□□□□□ -0.095e-6■■□□□ 13.3
SCLT1-201ENST00000281142 MYOM1P52179 1685 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 KCNA6P17658 529 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 WAPLQ7Z5K2 1190 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 PRAM1Q96QH2 718 aa14.47□□□□□ -0.09
SCLT1-201ENST00000281142 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
SCLT1-201ENST00000281142 SAFB2Q14151 953 aaKnown RBP eCLIP14.46□□□□□ -0.091e-6■■■■□ 19.9
SCLT1-201ENST00000281142 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
SCLT1-201ENST00000281142 WWC1Q8IX03 1113 aa14.45□□□□□ -0.1
SCLT1-201ENST00000281142 TBC1D32Q96NH3 1257 aa14.45□□□□□ -0.1
SCLT1-201ENST00000281142 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
SCLT1-201ENST00000281142 PTCH1Q13635 1447 aa14.45□□□□□ -0.1
SCLT1-201ENST00000281142 TNNT2P45379 298 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-201ENST00000281142 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
SCLT1-201ENST00000281142 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-201ENST00000281142 L1TD1Q5T7N2 865 aaKnown RBP14.43□□□□□ -0.1
SCLT1-201ENST00000281142 ZNF335Q9H4Z2 1342 aaPredicted RBP14.42□□□□□ -0.1
SCLT1-201ENST00000281142 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
SCLT1-201ENST00000281142 SIRT1Q96EB6 747 aa14.42□□□□□ -0.1
SCLT1-201ENST00000281142 RBM33Q96EV2 1170 aaKnown RBP14.42□□□□□ -0.1
SCLT1-201ENST00000281142 CDCA8Q53HL2 280 aa14.41□□□□□ -0.1
SCLT1-201ENST00000281142 GOLGA6L3A6NEY3 463 aa14.4□□□□□ -0.1
SCLT1-201ENST00000281142 MCM4P33991 863 aa14.4□□□□□ -0.1
SCLT1-201ENST00000281142 UPF2Q9HAU5 1272 aaKnown RBP14.4□□□□□ -0.1
SCLT1-201ENST00000281142 SBNO2Q9Y2G9 1366 aa14.4□□□□□ -0.1
SCLT1-201ENST00000281142 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
SCLT1-201ENST00000281142 NAP1L5Q96NT1 182 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-201ENST00000281142 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
SCLT1-201ENST00000281142 TULP4Q9NRJ4 1543 aa14.4□□□□□ -0.1
SCLT1-201ENST00000281142 XIRP1Q702N8 1843 aaKnown RBP14.39□□□□□ -0.11
SCLT1-201ENST00000281142 FSD2A1L4K1 749 aa14.39□□□□□ -0.11
SCLT1-201ENST00000281142 MFAP1P55081 439 aaKnown RBP14.38□□□□□ -0.11
SCLT1-201ENST00000281142 NPC1L1Q9UHC9 1359 aa14.38□□□□□ -0.11
SCLT1-201ENST00000281142 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
SCLT1-201ENST00000281142 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
SCLT1-201ENST00000281142 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
SCLT1-201ENST00000281142 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
SCLT1-201ENST00000281142 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
SCLT1-201ENST00000281142 TRAK2O60296 914 aa14.36□□□□□ -0.11
SCLT1-201ENST00000281142 RRP9O43818 475 aaKnown RBP14.35□□□□□ -0.11
SCLT1-201ENST00000281142 NINLQ9Y2I6 1382 aa14.35□□□□□ -0.11
SCLT1-201ENST00000281142 LRRC7Q96NW7 1537 aa14.35□□□□□ -0.11
SCLT1-201ENST00000281142 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
SCLT1-201ENST00000281142 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
SCLT1-201ENST00000281142 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
SCLT1-201ENST00000281142 LTBP4Q8N2S1 1624 aa14.34□□□□□ -0.11
SCLT1-201ENST00000281142 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.11
SCLT1-201ENST00000281142 EVC2Q86UK5 1308 aa14.33□□□□□ -0.12
SCLT1-201ENST00000281142 ADGRL3Q9HAR2 1447 aa14.33□□□□□ -0.12
SCLT1-201ENST00000281142 CDK19Q9BWU1 502 aa14.33□□□□□ -0.12
SCLT1-201ENST00000281142 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
SCLT1-201ENST00000281142 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
SCLT1-201ENST00000281142 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
SCLT1-201ENST00000281142 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
SCLT1-201ENST00000281142 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-201ENST00000281142 CLCN1P35523 988 aa14.32□□□□□ -0.12
SCLT1-201ENST00000281142 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
SCLT1-201ENST00000281142 RGPD8O14715 1765 aaPredicted RBP14.32□□□□□ -0.12
SCLT1-201ENST00000281142 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
SCLT1-201ENST00000281142 POLR3AO14802 1390 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms