RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
LRRC56-201ENST00000270115 ZSCAN23Q3MJ62 389 aa21.37■■□□□ 1.01
LRRC56-201ENST00000270115 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
LRRC56-201ENST00000270115 UNC13BO14795 1591 aa21.36■■□□□ 1.01
LRRC56-201ENST00000270115 ARAP3Q8WWN8 1544 aa21.36■■□□□ 1.01
LRRC56-201ENST00000270115 KIF3BO15066 747 aa21.36■■□□□ 1.01
LRRC56-201ENST00000270115 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
LRRC56-201ENST00000270115 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
LRRC56-201ENST00000270115 ZNF500O60304 480 aaPredicted RBP21.36■■□□□ 1.01
LRRC56-201ENST00000270115 AK9Q5TCS8 1911 aa21.35■■□□□ 1.01
LRRC56-201ENST00000270115 NUCB1Q02818 461 aa21.35■■□□□ 1.01
LRRC56-201ENST00000270115 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
LRRC56-201ENST00000270115 MADDQ8WXG6 1647 aa21.35■■□□□ 1.01
LRRC56-201ENST00000270115 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
LRRC56-201ENST00000270115 MTHFSP49914 203 aa21.34■■□□□ 1.01
LRRC56-201ENST00000270115 ATF7IPQ6VMQ6 1270 aa21.34■■□□□ 1.01
LRRC56-201ENST00000270115 CHD1LQ86WJ1 897 aa21.34■■□□□ 1.01
LRRC56-201ENST00000270115 ZNF445P59923 1031 aa21.33■■□□□ 1.01
LRRC56-201ENST00000270115 RBM27Q9P2N5 1060 aaKnown RBP21.33■■□□□ 1.01
LRRC56-201ENST00000270115 CFAP70Q5T0N1 1121 aa21.33■■□□□ 1
LRRC56-201ENST00000270115 U2AF1L5P0DN76 240 aaPredicted RBP21.32■■□□□ 1
LRRC56-201ENST00000270115 U2AF1Q01081 240 aaKnown RBP eCLIP21.32■■□□□ 1
LRRC56-201ENST00000270115 SMAP1Q8IYB5 467 aaPredicted RBP21.32■■□□□ 1
LRRC56-201ENST00000270115 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
LRRC56-201ENST00000270115 KDM5AP29375 1690 aaKnown RBP21.32■■□□□ 1
LRRC56-201ENST00000270115 CD109Q6YHK3 1445 aa21.32■■□□□ 1
LRRC56-201ENST00000270115 HS1BP3Q53T59 392 aa21.32■■□□□ 1
LRRC56-201ENST00000270115 ANKRD45Q5TZF3 282 aa21.32■■□□□ 1
LRRC56-201ENST00000270115 TBC1D9Q6ZT07 1266 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 ZKSCAN5Q9Y2L8 839 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 IQSEC2Q5JU85 1478 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 ZBTB40Q9NUA8 1239 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 DYNC1I1O14576 645 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 PKP1Q13835 747 aa21.31■■□□□ 1
LRRC56-201ENST00000270115 CCDC27Q2M243 656 aa21.3■■□□□ 1
LRRC56-201ENST00000270115 IQGAP3Q86VI3 1631 aa21.3■■□□□ 1
LRRC56-201ENST00000270115 BMP2KLQ5H9B9 411 aa21.3■■□□□ 1
LRRC56-201ENST00000270115 PDLIM2Q96JY6 352 aa21.3■■□□□ 1
LRRC56-201ENST00000270115 LMBRD1Q9NUN5 540 aa21.3■■□□□ 1
LRRC56-201ENST00000270115 ATP10AO60312 1499 aa21.29■■□□□ 1
LRRC56-201ENST00000270115 ERVK-7P63135 1459 aa21.29■■□□□ 1
LRRC56-201ENST00000270115 PRPF40AO75400 957 aaKnown RBP21.29■■□□□ 1
LRRC56-201ENST00000270115 CLEC17AQ6ZS10 378 aa21.29■■□□□ 1
LRRC56-201ENST00000270115 JARID2Q92833 1246 aaPredicted RBP21.29■■□□□ 1
LRRC56-201ENST00000270115 CEP152O94986 1710 aa21.29■■□□□ 1
LRRC56-201ENST00000270115 ATP7AQ04656 1500 aa21.29■■□□□ 1
LRRC56-201ENST00000270115 NSD3Q9BZ95 1437 aa21.28■■□□□ 1
LRRC56-201ENST00000270115 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
LRRC56-201ENST00000270115 SHPRHQ149N8 1683 aa21.28■■□□□ 1
LRRC56-201ENST00000270115 CHAMP1Q96JM3 812 aa21.28■■□□□ 1
LRRC56-201ENST00000270115 CSPP1Q1MSJ5 1256 aa21.27■■□□□ 1
LRRC56-201ENST00000270115 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 SASS6Q6UVJ0 657 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 RNF214Q8ND24 703 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 C1orf115Q9H7X2 142 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 KANK1Q14678 1352 aa21.26■□□□□ 0.99
LRRC56-201ENST00000270115 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
LRRC56-201ENST00000270115 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
LRRC56-201ENST00000270115 TSC1Q92574 1164 aa21.25■□□□□ 0.99
LRRC56-201ENST00000270115 GPT2Q8TD30 523 aa21.24■□□□□ 0.99
LRRC56-201ENST00000270115 SYCE3A1L190 88 aa21.24■□□□□ 0.99
LRRC56-201ENST00000270115 MPNDQ8N594 471 aa21.23■□□□□ 0.99
LRRC56-201ENST00000270115 INO80Q9ULG1 1556 aaPredicted RBP21.23■□□□□ 0.99
LRRC56-201ENST00000270115 FOXD4L5Q5VV16 416 aaPredicted RBP21.22■□□□□ 0.99
LRRC56-201ENST00000270115 FOXD4L4Q8WXT5 416 aaPredicted RBP21.22■□□□□ 0.99
LRRC56-201ENST00000270115 DNTTIP2Q5QJE6 756 aaKnown RBP21.22■□□□□ 0.99
LRRC56-201ENST00000270115 NUCB2P80303 420 aa21.21■□□□□ 0.99
LRRC56-201ENST00000270115 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
LRRC56-201ENST00000270115 U2SURPO15042 1029 aaKnown RBP21.21■□□□□ 0.99
LRRC56-201ENST00000270115 PTMAP06454 111 aaKnown RBP21.21■□□□□ 0.99
LRRC56-201ENST00000270115 CCDC94Q9BW85 323 aaPredicted RBP21.21■□□□□ 0.99
LRRC56-201ENST00000270115 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
LRRC56-201ENST00000270115 NSFL1CQ9UNZ2 370 aaKnown RBP21.2■□□□□ 0.98
LRRC56-201ENST00000270115 TMEM63CQ9P1W3 806 aa21.2■□□□□ 0.98
LRRC56-201ENST00000270115 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
LRRC56-201ENST00000270115 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
LRRC56-201ENST00000270115 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
LRRC56-201ENST00000270115 IPO8O15397 1037 aaKnown RBP21.18■□□□□ 0.98
LRRC56-201ENST00000270115 DMTNQ08495 405 aa21.18■□□□□ 0.98
LRRC56-201ENST00000270115 LRSAM1Q6UWE0 723 aa21.18■□□□□ 0.98
LRRC56-201ENST00000270115 MCM5P33992 734 aa21.17■□□□□ 0.98
LRRC56-201ENST00000270115 CBX1P83916 185 aa21.17■□□□□ 0.98
LRRC56-201ENST00000270115 ZNF518AQ6AHZ1 1483 aa21.17■□□□□ 0.98
LRRC56-201ENST00000270115 FAM177BA6PVY3 158 aa21.17■□□□□ 0.98
LRRC56-201ENST00000270115 CYP2E1P05181 493 aaPredicted RBP21.17■□□□□ 0.98
LRRC56-201ENST00000270115 ZSCAN20P17040 1043 aaPredicted RBP21.17■□□□□ 0.98
LRRC56-201ENST00000270115 TRIM35Q9UPQ4 493 aa21.17■□□□□ 0.98
LRRC56-201ENST00000270115 GGT6Q6P531 493 aa21.16■□□□□ 0.98
LRRC56-201ENST00000270115 SPHKAPQ2M3C7 1700 aa21.16■□□□□ 0.98
LRRC56-201ENST00000270115 CDC45O75419 566 aa21.16■□□□□ 0.98
LRRC56-201ENST00000270115 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
LRRC56-201ENST00000270115 RABEP1Q15276 862 aa21.15■□□□□ 0.98
LRRC56-201ENST00000270115 TRAK1Q9UPV9 953 aa21.15■□□□□ 0.98
LRRC56-201ENST00000270115 FAM69CQ0P6D2 419 aa21.14■□□□□ 0.98
LRRC56-201ENST00000270115 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.98
LRRC56-201ENST00000270115 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.98
LRRC56-201ENST00000270115 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.98
LRRC56-201ENST00000270115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.97
LRRC56-201ENST00000270115 PPIP5K1Q6PFW1 1433 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms