RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 SPDYE4A6NLX3 237 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 NUCB1Q02818 461 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 WDR63Q8IWG1 891 aa29.41■■■□□ 2.3
CCM2L-201ENST00000262659 GTF2F1P35269 517 aaKnown RBP eCLIP29.4■■■□□ 2.3
CCM2L-201ENST00000262659 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
CCM2L-201ENST00000262659 TMEM63CQ9P1W3 806 aa29.4■■■□□ 2.3
CCM2L-201ENST00000262659 RNF17Q9BXT8 1623 aaKnown RBP29.39■■■□□ 2.3
CCM2L-201ENST00000262659 CYP2E1P05181 493 aaPredicted RBP29.39■■■□□ 2.3
CCM2L-201ENST00000262659 MYOM1P52179 1685 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 NUCB2P80303 420 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 RUNDC1Q96C34 613 aa29.39■■■□□ 2.3
CCM2L-201ENST00000262659 IGSF3O75054 1194 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 PLB1Q6P1J6 1458 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 TRIM27P14373 513 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 BMP2KLQ5H9B9 411 aa29.38■■■□□ 2.29
CCM2L-201ENST00000262659 HMGN5P82970 282 aaKnown RBP29.37■■■□□ 2.29
CCM2L-201ENST00000262659 DDX19BQ9UMR2 479 aa29.37■■■□□ 2.29
CCM2L-201ENST00000262659 TBC1D9Q6ZT07 1266 aa29.36■■■□□ 2.29
CCM2L-201ENST00000262659 SYNJ2O15056 1496 aa29.35■■■□□ 2.29
CCM2L-201ENST00000262659 NSFL1CQ9UNZ2 370 aaKnown RBP29.35■■■□□ 2.29
CCM2L-201ENST00000262659 CHD1LQ86WJ1 897 aa29.35■■■□□ 2.29
CCM2L-201ENST00000262659 POLR3AO14802 1390 aaPredicted RBP29.34■■■□□ 2.29
CCM2L-201ENST00000262659 MPNDQ8N594 471 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 KIF3AQ9Y496 699 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 VGLL3A8MV65 326 aa29.34■■■□□ 2.29
CCM2L-201ENST00000262659 CHAMP1Q96JM3 812 aa29.33■■■□□ 2.29
CCM2L-201ENST00000262659 IQSEC2Q5JU85 1478 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 HNRNPMP52272 730 aaKnown RBP eCLIP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 BCL2L12Q9HB09 334 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 SMC4Q9NTJ3 1288 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 IPO4Q8TEX9 1081 aaKnown RBP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 ZNF830Q96NB3 372 aaPredicted RBP29.32■■■□□ 2.28
CCM2L-201ENST00000262659 CARD14Q9BXL6 1004 aa29.32■■■□□ 2.28
CCM2L-201ENST00000262659 NOLC1Q14978 699 aaKnown RBP eCLIP29.31■■■□□ 2.28
CCM2L-201ENST00000262659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.31■■■□□ 2.28
CCM2L-201ENST00000262659 ZBTB22O15209 634 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 PIBF1Q8WXW3 757 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 CGNQ9P2M7 1197 aaKnown RBP29.3■■■□□ 2.28
CCM2L-201ENST00000262659 KANK1Q14678 1352 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 IQGAP1P46940 1657 aa29.3■■■□□ 2.28
CCM2L-201ENST00000262659 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 C17orf53Q8N3J3 647 aaPredicted RBP29.29■■■□□ 2.28
CCM2L-201ENST00000262659 PDCL2Q8N4E4 241 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 ZBTB40Q9NUA8 1239 aa29.29■■■□□ 2.28
CCM2L-201ENST00000262659 TAF3Q5VWG9 929 aa29.27■■■□□ 2.28
CCM2L-201ENST00000262659 TMEM57Q8N5G2 664 aa29.27■■■□□ 2.28
CCM2L-201ENST00000262659 U2AF2P26368 475 aaKnown RBP eCLIP29.26■■■□□ 2.27
CCM2L-201ENST00000262659 ATF7IPQ6VMQ6 1270 aa29.26■■■□□ 2.27
CCM2L-201ENST00000262659 TSR2Q969E8 191 aaKnown RBP29.26■■■□□ 2.27
CCM2L-201ENST00000262659 ZDHHC9Q9Y397 364 aa29.26■■■□□ 2.27
CCM2L-201ENST00000262659 SHPRHQ149N8 1683 aa29.25■■■□□ 2.27
CCM2L-201ENST00000262659 CFAP74Q9C0B2 1584 aa29.25■■■□□ 2.27
CCM2L-201ENST00000262659 SSH1Q8WYL5 1049 aa29.24■■■□□ 2.27
CCM2L-201ENST00000262659 CCDC27Q2M243 656 aa29.24■■■□□ 2.27
CCM2L-201ENST00000262659 ZGPATQ8N5A5 531 aaKnown RBP29.23■■■□□ 2.27
CCM2L-201ENST00000262659 NOB1Q9ULX3 412 aaKnown RBP29.23■■■□□ 2.27
CCM2L-201ENST00000262659 RABEP1Q15276 862 aa29.22■■■□□ 2.27
CCM2L-201ENST00000262659 ANKRD45Q5TZF3 282 aa29.22■■■□□ 2.27
CCM2L-201ENST00000262659 SCAF11Q99590 1463 aaKnown RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 ZNF771Q7L3S4 317 aaPredicted RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 TSPY26PQ9H489 355 aa29.21■■■□□ 2.27
CCM2L-201ENST00000262659 TTC12Q9H892 705 aaPredicted RBP29.21■■■□□ 2.27
CCM2L-201ENST00000262659 EXOSC9Q06265 439 aaKnown RBP29.2■■■□□ 2.26
CCM2L-201ENST00000262659 FKBP5Q13451 457 aaPredicted RBP29.2■■■□□ 2.26
CCM2L-201ENST00000262659 CWC22Q9HCG8 908 aaKnown RBP29.19■■■□□ 2.26
CCM2L-201ENST00000262659 KDM5AP29375 1690 aaKnown RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 CEP152O94986 1710 aa29.17■■■□□ 2.26
CCM2L-201ENST00000262659 FOXD4L5Q5VV16 416 aaPredicted RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 PLCD3Q8N3E9 789 aa29.17■■■□□ 2.26
CCM2L-201ENST00000262659 FOXD4L4Q8WXT5 416 aaPredicted RBP29.17■■■□□ 2.26
CCM2L-201ENST00000262659 SPTLC3Q9NUV7 552 aa29.16■■■□□ 2.26
CCM2L-201ENST00000262659 ANKRD7Q92527 254 aa29.16■■■□□ 2.26
CCM2L-201ENST00000262659 CT47B1P0C2W7 299 aaPredicted RBP29.15■■■□□ 2.26
CCM2L-201ENST00000262659 MADDQ8WXG6 1647 aa29.15■■■□□ 2.26
CCM2L-201ENST00000262659 CDC45O75419 566 aa29.15■■■□□ 2.26
CCM2L-201ENST00000262659 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
CCM2L-201ENST00000262659 MBD3O95983 291 aa29.14■■■□□ 2.26
CCM2L-201ENST00000262659 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
CCM2L-201ENST00000262659 MORC1Q86VD1 984 aa29.12■■■□□ 2.25
CCM2L-201ENST00000262659 RIOK3O14730 519 aaKnown RBP29.12■■■□□ 2.25
CCM2L-201ENST00000262659 USP25Q9UHP3 1055 aa29.11■■■□□ 2.25
CCM2L-201ENST00000262659 CDK11BP21127 795 aaKnown RBP29.11■■■□□ 2.25
CCM2L-201ENST00000262659 FEZ1Q99689 392 aa29.09■■■□□ 2.25
CCM2L-201ENST00000262659 FBLN2P98095 1184 aa29.09■■■□□ 2.25
CCM2L-201ENST00000262659 ARHGEF5Q12774 1597 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 UNC13BO14795 1591 aa29.08■■■□□ 2.25
CCM2L-201ENST00000262659 IRX5P78411 483 aaPredicted RBP29.08■■■□□ 2.24
CCM2L-201ENST00000262659 OGFRQ9NZT2 677 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 MAGI1Q96QZ7 1491 aaPredicted RBP29.07■■■□□ 2.24
CCM2L-201ENST00000262659 PPIP5K1Q6PFW1 1433 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 GCC1Q96CN9 775 aa29.07■■■□□ 2.24
CCM2L-201ENST00000262659 ADCY5O95622 1261 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 USP26Q9BXU7 913 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 NOS1P29475 1434 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 ATP10AO60312 1499 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 CARMIL2Q6F5E8 1435 aa29.06■■■□□ 2.24
CCM2L-201ENST00000262659 GSPT1P15170 499 aaKnown RBP29.05■■■□□ 2.24
CCM2L-201ENST00000262659 C1orf115Q9H7X2 142 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms