RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 RalgapbQ8BQZ4 1484 aa19.31■□□□□ 0.68
Upf1-202ENSMUST00000215817 Cnnm1Q0GA42 951 aa19.31■□□□□ 0.68
Upf1-202ENSMUST00000215817 Zeb2Q9R0G7 1215 aa19.31■□□□□ 0.68
Upf1-202ENSMUST00000215817 HnrnpuQ8VEK3 800 aaKnown RBP19.3■□□□□ 0.68
Upf1-202ENSMUST00000215817 Nol11Q8BJW5 723 aaKnown RBP19.3■□□□□ 0.68
Upf1-202ENSMUST00000215817 TnikP83510 1323 aa19.3■□□□□ 0.68
Upf1-202ENSMUST00000215817 4930572O03RikQ8C5Y0 211 aa19.3■□□□□ 0.68
Upf1-202ENSMUST00000215817 PalldQ9ET54 1408 aa19.29■□□□□ 0.68
Upf1-202ENSMUST00000215817 Slc4a10Q5DTL9 1118 aa19.29■□□□□ 0.68
Upf1-202ENSMUST00000215817 Abcc3B2RX12 1523 aa19.29■□□□□ 0.68
Upf1-202ENSMUST00000215817 Zfp444Q3TDV8 331 aaKnown RBP19.28■□□□□ 0.68
Upf1-202ENSMUST00000215817 Dnajc10Q9DC23 793 aa19.28■□□□□ 0.68
Upf1-202ENSMUST00000215817 Ppp1r15aP17564 657 aa19.28■□□□□ 0.68
Upf1-202ENSMUST00000215817 Chmp5Q9D7S9 219 aa19.28■□□□□ 0.68
Upf1-202ENSMUST00000215817 Clasp1Q80TV8 1535 aaKnown RBP19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 InsrP15208 1372 aa19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 ApobrQ8VBT6 942 aa19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 Cpsf1Q9EPU4 1441 aaKnown RBP19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 Qtrt2B8ZXI1 415 aa19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 Ppip5k1A2ARP1 1436 aa19.27■□□□□ 0.68
Upf1-202ENSMUST00000215817 Clstn1Q9EPL2 979 aa19.27■□□□□ 0.67
Upf1-202ENSMUST00000215817 Hsp90b1P08113 802 aaKnown RBP19.26■□□□□ 0.67
Upf1-202ENSMUST00000215817 Mbd3Q9Z2D8 285 aaKnown RBP19.25■□□□□ 0.67
Upf1-202ENSMUST00000215817 Kdm5cP41230 1554 aa19.25■□□□□ 0.67
Upf1-202ENSMUST00000215817 Ric3Q8BPM6 367 aa19.25■□□□□ 0.67
Upf1-202ENSMUST00000215817 Plch2A2AP18 1501 aa19.24■□□□□ 0.67
Upf1-202ENSMUST00000215817 Hsp90ab1P11499 724 aaKnown RBP19.24■□□□□ 0.67
Upf1-202ENSMUST00000215817 Map3k19E9Q3S4 1311 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Sv2bQ8BG39 683 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Dip2cE9PWR4 1557 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Ttll13A4Q9F6 804 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Cfdp1O88271 295 aaKnown RBP19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Amotl2Q8K371 772 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Uggt2E9Q4X2 1504 aa19.23■□□□□ 0.67
Upf1-202ENSMUST00000215817 Tarbp1E9Q368 1579 aa19.22■□□□□ 0.67
Upf1-202ENSMUST00000215817 Trpm2Q91YD4 1506 aa19.22■□□□□ 0.67
Upf1-202ENSMUST00000215817 Txnrd1Q9JMH6 613 aa19.22■□□□□ 0.67
Upf1-202ENSMUST00000215817 CanxP35564 591 aaKnown RBP19.22■□□□□ 0.67
Upf1-202ENSMUST00000215817 BcanQ61361 883 aa19.22■□□□□ 0.67
Upf1-202ENSMUST00000215817 Pank1Q8K4K6 548 aa19.21■□□□□ 0.67
Upf1-202ENSMUST00000215817 AppP12023 770 aa19.21■□□□□ 0.67
Upf1-202ENSMUST00000215817 TefQ9JLC6 301 aa19.21■□□□□ 0.67
Upf1-202ENSMUST00000215817 Eif3bQ8JZQ9 803 aaKnown RBP19.21■□□□□ 0.67
Upf1-202ENSMUST00000215817 Atxn3Q9CVD2 355 aa19.2■□□□□ 0.66
Upf1-202ENSMUST00000215817 Ccdc155Q80VJ8 648 aa19.2■□□□□ 0.66
Upf1-202ENSMUST00000215817 Triml2E9PW10 424 aa19.19■□□□□ 0.66
Upf1-202ENSMUST00000215817 Map7O88735 730 aa19.19■□□□□ 0.66
Upf1-202ENSMUST00000215817 Fchsd2Q3USJ8 740 aa19.19■□□□□ 0.66
Upf1-202ENSMUST00000215817 Supt16hQ920B9 1047 aa19.19■□□□□ 0.66
Upf1-202ENSMUST00000215817 Btbd11Q6GQW0 1109 aa19.18■□□□□ 0.66
Upf1-202ENSMUST00000215817 Gm32742A0A1B0GT42 1604 aa19.18■□□□□ 0.66
Upf1-202ENSMUST00000215817 Slc5a1Q8C3K6 665 aa19.17■□□□□ 0.66
Upf1-202ENSMUST00000215817 Elp1Q7TT37 1333 aaKnown RBP19.16■□□□□ 0.66
Upf1-202ENSMUST00000215817 AglF8VPN4 1532 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Exoc5Q3TPX4 708 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Mphosph10Q810V0 681 aaKnown RBP19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Pknox2Q8BG99 474 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Ccdc146E9Q9F7 977 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Eva1cP58659 440 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Bicdl1A0JNT9 577 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Nphp4P59240 1425 aa19.15■□□□□ 0.66
Upf1-202ENSMUST00000215817 Cdc37l1Q9CZP7 335 aa19.14■□□□□ 0.65
Upf1-202ENSMUST00000215817 PsapQ61207 557 aaKnown RBP19.13■□□□□ 0.65
Upf1-202ENSMUST00000215817 Smc4Q8CG47 1286 aa19.13■□□□□ 0.65
Upf1-202ENSMUST00000215817 Brpf1B2RRD7 1212 aa19.13■□□□□ 0.65
Upf1-202ENSMUST00000215817 Trim58Q5NCC9 485 aa19.13■□□□□ 0.65
Upf1-202ENSMUST00000215817 KnstrnQ9D9Z1 312 aaKnown RBP19.13■□□□□ 0.65
Upf1-202ENSMUST00000215817 Setbp1Q9Z180 1582 aa19.12■□□□□ 0.65
Upf1-202ENSMUST00000215817 Vsig10D3YX43 558 aa19.12■□□□□ 0.65
Upf1-202ENSMUST00000215817 Kiaa1210E9Q0C6 1637 aa19.12■□□□□ 0.65
Upf1-202ENSMUST00000215817 Eif4a2P10630 407 aa19.12■□□□□ 0.65
Upf1-202ENSMUST00000215817 Nlgn1Q99K10 843 aa19.11■□□□□ 0.65
Upf1-202ENSMUST00000215817 Nckap5lQ6GQX2 1323 aa19.11■□□□□ 0.65
Upf1-202ENSMUST00000215817 Slc35g1Q8BY79 368 aa19.11■□□□□ 0.65
Upf1-202ENSMUST00000215817 Kcna6Q61923 529 aa19.11■□□□□ 0.65
Upf1-202ENSMUST00000215817 Sh3bp5Q9Z131 463 aa19.1■□□□□ 0.65
Upf1-202ENSMUST00000215817 OptnQ8K3K8 584 aa19.1■□□□□ 0.65
Upf1-202ENSMUST00000215817 Zmym4A2A791 1549 aaKnown RBP19.1■□□□□ 0.65
Upf1-202ENSMUST00000215817 Taok2Q6ZQ29 1240 aa19.1■□□□□ 0.65
Upf1-202ENSMUST00000215817 Gtf3c3Q3TMP1 882 aa19.09■□□□□ 0.65
Upf1-202ENSMUST00000215817 Robo2Q7TPD3 1470 aa19.09■□□□□ 0.65
Upf1-202ENSMUST00000215817 Rassf8Q8CJ96 419 aa19.09■□□□□ 0.65
Upf1-202ENSMUST00000215817 Wdr17E9Q271 1322 aa19.09■□□□□ 0.65
Upf1-202ENSMUST00000215817 Znf710Q3U288 666 aa19.08■□□□□ 0.65
Upf1-202ENSMUST00000215817 Gnl3lQ6PGG6 577 aaKnown RBP19.08■□□□□ 0.65
Upf1-202ENSMUST00000215817 Rbm5Q91YE7 815 aaKnown RBP19.08■□□□□ 0.64
Upf1-202ENSMUST00000215817 Ercc6l2Q9JIM3 1537 aa19.08■□□□□ 0.64
Upf1-202ENSMUST00000215817 Hoxb7P09024 217 aa19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Cadps2Q8BYR5 1297 aa19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Emilin2Q8K482 1074 aa19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Eno4Q8C042 619 aa19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Klc3Q91W40 508 aa19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Pes1Q9EQ61 584 aaKnown RBP19.07■□□□□ 0.64
Upf1-202ENSMUST00000215817 Q8C5K5 320 aa19.06■□□□□ 0.64
Upf1-202ENSMUST00000215817 Rsph6aQ8CDR2 708 aa19.06■□□□□ 0.64
Upf1-202ENSMUST00000215817 Map3k13Q1HKZ5 959 aa19.06■□□□□ 0.64
Upf1-202ENSMUST00000215817 Trim44Q9QXA7 346 aa19.06■□□□□ 0.64
Upf1-202ENSMUST00000215817 Eya1P97767 591 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Psrc1Q9D0P7 329 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Hecw2Q6I6G8 1578 aa19.05■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 90.1 ms